BLASTX nr result

ID: Atractylodes22_contig00020614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00020614
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16818.3| unnamed protein product [Vitis vinifera]               58   7e-07
emb|CAN81849.1| hypothetical protein VITISV_036820 [Vitis vinifera]    58   7e-07
ref|XP_002282194.2| PREDICTED: uncharacterized protein LOC100245...    56   3e-06
ref|XP_002515056.1| Nucleoporin GLE1, putative [Ricinus communis...    56   3e-06

>emb|CBI16818.3| unnamed protein product [Vitis vinifera]
          Length = 701

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/47 (59%), Positives = 37/47 (78%), Gaps = 1/47 (2%)
 Frame = -2

Query: 141 MGGVQLELRCPQRVGGIIA-DPQIDWSFDELLSELNTIDHTLQASSL 4
           MG V+LELRCPQ   GIIA DP+ DWSF+ L+SELN+++  L +SS+
Sbjct: 40  MGAVKLELRCPQNENGIIAADPEPDWSFEALVSELNSLELKLNSSSI 86


>emb|CAN81849.1| hypothetical protein VITISV_036820 [Vitis vinifera]
          Length = 745

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/47 (59%), Positives = 37/47 (78%), Gaps = 1/47 (2%)
 Frame = -2

Query: 141 MGGVQLELRCPQRVGGIIA-DPQIDWSFDELLSELNTIDHTLQASSL 4
           MG V+LELRCPQ   GIIA DP+ DWSF+ L+SELN+++  L +SS+
Sbjct: 70  MGAVKLELRCPQNENGIIAADPEPDWSFEALVSELNSLELKLNSSSI 116


>ref|XP_002282194.2| PREDICTED: uncharacterized protein LOC100245667 [Vitis vinifera]
          Length = 680

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/46 (58%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
 Frame = -2

Query: 138 GGVQLELRCPQRVGGIIA-DPQIDWSFDELLSELNTIDHTLQASSL 4
           G V+LELRCPQ   GIIA DP+ DWSF+ L+SELN+++  L +SS+
Sbjct: 24  GAVKLELRCPQNENGIIAADPEPDWSFEALVSELNSLELKLNSSSI 69


>ref|XP_002515056.1| Nucleoporin GLE1, putative [Ricinus communis]
           gi|223546107|gb|EEF47610.1| Nucleoporin GLE1, putative
           [Ricinus communis]
          Length = 613

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/46 (56%), Positives = 33/46 (71%)
 Frame = -2

Query: 144 IMGGVQLELRCPQRVGGIIADPQIDWSFDELLSELNTIDHTLQASS 7
           I G  +LELRCPQRV  +  DP  DWSFD LLSEL+++++ L  SS
Sbjct: 2   IRGAFKLELRCPQRVNEVGVDPNPDWSFDSLLSELSSLENKLNNSS 47


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