BLASTX nr result

ID: Atractylodes22_contig00020600 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00020600
         (930 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275953.1| PREDICTED: succinyl-CoA ligase [ADP-forming]...   443   e-122
gb|ABC01911.1| succinyl CoA ligase beta subunit-like protein [So...   432   e-119
ref|XP_002884202.1| hypothetical protein ARALYDRAFT_480870 [Arab...   430   e-118
ref|NP_179632.1| Succinyl-CoA ligase [GDP-forming] subunit beta ...   430   e-118
gb|AAM65138.1| succinyl-CoA ligase beta subunit [Arabidopsis tha...   430   e-118

>ref|XP_002275953.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial [Vitis vinifera]
           gi|147782941|emb|CAN72294.1| hypothetical protein
           VITISV_037293 [Vitis vinifera]
           gi|297744178|emb|CBI37148.3| unnamed protein product
           [Vitis vinifera]
          Length = 423

 Score =  443 bits (1139), Expect = e-122
 Identities = 223/260 (85%), Positives = 239/260 (91%)
 Frame = +2

Query: 149 MVGGLFNKLASKSLKVAGKWQQQQLRRLNVHEYQGAELMNKFGINVPKGVAVSSAPDVRK 328
           MV GL NKL S+SL VAGKWQQQQLRRLN+HEYQGAELM+K+GINVPKGVAV S  +VRK
Sbjct: 1   MVRGLVNKLVSRSLNVAGKWQQQQLRRLNIHEYQGAELMSKYGINVPKGVAVGSIEEVRK 60

Query: 329 AIQSTFPNEKELVVKSQILAGGRGLGKFTSGLQGGVHIVKVEQAEEIAGKMLGQTLVTKQ 508
            IQ  FP E ELVVKSQILAGGRGLG F SGL+GGVHIVK +Q EE+AGKMLGQ LVTKQ
Sbjct: 61  TIQDVFPKENELVVKSQILAGGRGLGTFKSGLKGGVHIVKTDQVEELAGKMLGQILVTKQ 120

Query: 509 TGPQGKVVSKVYLCEKVSLVNEMYFAITLDRTSAGPLIIACREGGTSIEDLAEKFPDMII 688
           TGPQGKVVSKVYLCEK+SLVNEMYFAITLDR+SAGP+IIACR+GGTSIEDLAEKFPDMI+
Sbjct: 121 TGPQGKVVSKVYLCEKMSLVNEMYFAITLDRSSAGPIIIACRKGGTSIEDLAEKFPDMIV 180

Query: 689 KVPIDVFKGITDEDAAKVVDGLAPKVADRNASIEQVKKLYNLFRKADCTQLEINPIAETS 868
           KVPIDVF+GITDEDAAKVVDGLAPKVADRNASIEQVKKLY LF + DCT LEINPIAETS
Sbjct: 181 KVPIDVFQGITDEDAAKVVDGLAPKVADRNASIEQVKKLYKLFCECDCTLLEINPIAETS 240

Query: 869 DNKLVAADAKLNFDDNAAFR 928
           DN+LVAADAKLNFDDNAAFR
Sbjct: 241 DNQLVAADAKLNFDDNAAFR 260


>gb|ABC01911.1| succinyl CoA ligase beta subunit-like protein [Solanum tuberosum]
          Length = 421

 Score =  432 bits (1112), Expect = e-119
 Identities = 216/260 (83%), Positives = 237/260 (91%)
 Frame = +2

Query: 149 MVGGLFNKLASKSLKVAGKWQQQQLRRLNVHEYQGAELMNKFGINVPKGVAVSSAPDVRK 328
           MV G+  KLA++SL VAGKWQQQQLRRLN+HEYQGAELM K+GINVPKGVAV+S  +V+K
Sbjct: 1   MVRGMLRKLANQSLSVAGKWQQQQLRRLNIHEYQGAELMGKYGINVPKGVAVASLDEVKK 60

Query: 329 AIQSTFPNEKELVVKSQILAGGRGLGKFTSGLQGGVHIVKVEQAEEIAGKMLGQTLVTKQ 508
           AIQ  FPN+ E+VVKSQ+LAGGRGLG F +G QGGVHIVK +QAEEIA KMLGQ LVTKQ
Sbjct: 61  AIQDVFPNQSEVVVKSQVLAGGRGLGTFKNGFQGGVHIVKADQAEEIASKMLGQILVTKQ 120

Query: 509 TGPQGKVVSKVYLCEKVSLVNEMYFAITLDRTSAGPLIIACREGGTSIEDLAEKFPDMII 688
           TG QGKVVSKVYLCEK+SLVNEMYF+I LDR +AGPLIIACR+GGTSIEDLAEKFPDMII
Sbjct: 121 TGAQGKVVSKVYLCEKMSLVNEMYFSIILDRATAGPLIIACRKGGTSIEDLAEKFPDMII 180

Query: 689 KVPIDVFKGITDEDAAKVVDGLAPKVADRNASIEQVKKLYNLFRKADCTQLEINPIAETS 868
           KVPIDVFKGI+DEDAAKVVDGLAPKVADRN SIEQVKKLYNLF + DCT LEINP+AETS
Sbjct: 181 KVPIDVFKGISDEDAAKVVDGLAPKVADRNDSIEQVKKLYNLFCETDCTMLEINPLAETS 240

Query: 869 DNKLVAADAKLNFDDNAAFR 928
           DNKLVAADAKLNFDDNAA+R
Sbjct: 241 DNKLVAADAKLNFDDNAAYR 260


>ref|XP_002884202.1| hypothetical protein ARALYDRAFT_480870 [Arabidopsis lyrata subsp.
           lyrata] gi|297330042|gb|EFH60461.1| hypothetical protein
           ARALYDRAFT_480870 [Arabidopsis lyrata subsp. lyrata]
          Length = 421

 Score =  430 bits (1106), Expect = e-118
 Identities = 216/257 (84%), Positives = 232/257 (90%)
 Frame = +2

Query: 158 GLFNKLASKSLKVAGKWQQQQLRRLNVHEYQGAELMNKFGINVPKGVAVSSAPDVRKAIQ 337
           GL NKL S+SL ++GKWQQQQLRRLN+HEYQGAELM K+G+NVPKGVA SS  +V+KAIQ
Sbjct: 3   GLVNKLVSRSLSISGKWQQQQLRRLNIHEYQGAELMGKYGVNVPKGVAASSLEEVKKAIQ 62

Query: 338 STFPNEKELVVKSQILAGGRGLGKFTSGLQGGVHIVKVEQAEEIAGKMLGQTLVTKQTGP 517
             FPNE ELVVKSQILAGGRGLG F SGL+GGVHIVK  QAE+IAGKMLGQ LVTKQTGP
Sbjct: 63  EVFPNESELVVKSQILAGGRGLGTFKSGLKGGVHIVKRGQAEDIAGKMLGQVLVTKQTGP 122

Query: 518 QGKVVSKVYLCEKVSLVNEMYFAITLDRTSAGPLIIACREGGTSIEDLAEKFPDMIIKVP 697
           QGKVVSKVYLCEK+SLVNEMYF+I LDR SAGPLIIAC++GGTSIEDLAEKFPDMIIKVP
Sbjct: 123 QGKVVSKVYLCEKLSLVNEMYFSIILDRKSAGPLIIACKKGGTSIEDLAEKFPDMIIKVP 182

Query: 698 IDVFKGITDEDAAKVVDGLAPKVADRNASIEQVKKLYNLFRKADCTQLEINPIAETSDNK 877
           IDVF GITDEDAAKVVDGLAPK ADR  SIEQVKKLY LFRK DCT LEINP+AETS N+
Sbjct: 183 IDVFAGITDEDAAKVVDGLAPKAADRKDSIEQVKKLYELFRKTDCTMLEINPLAETSTNQ 242

Query: 878 LVAADAKLNFDDNAAFR 928
           LVAADAKLNFDDNAAFR
Sbjct: 243 LVAADAKLNFDDNAAFR 259


>ref|NP_179632.1| Succinyl-CoA ligase [GDP-forming] subunit beta [Arabidopsis
           thaliana] gi|21264030|sp|O82662.1|SUCB_ARATH RecName:
           Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial; AltName: Full=Succinyl-CoA synthetase
           beta chain; Short=SCS-beta; Flags: Precursor
           gi|3660469|emb|CAA05024.1| succinyl-CoA-ligase beta
           subunit [Arabidopsis thaliana]
           gi|20197853|gb|AAM15283.1| succinyl-CoA ligase beta
           subunit [Arabidopsis thaliana]
           gi|20466482|gb|AAM20558.1| succinyl-CoA ligase beta
           subunit [Arabidopsis thaliana]
           gi|22136422|gb|AAM91289.1| succinyl-CoA ligase beta
           subunit [Arabidopsis thaliana]
           gi|330251911|gb|AEC07005.1| Succinyl-CoA ligase
           [GDP-forming] subunit beta [Arabidopsis thaliana]
          Length = 421

 Score =  430 bits (1105), Expect = e-118
 Identities = 215/257 (83%), Positives = 232/257 (90%)
 Frame = +2

Query: 158 GLFNKLASKSLKVAGKWQQQQLRRLNVHEYQGAELMNKFGINVPKGVAVSSAPDVRKAIQ 337
           GL NKL S+SL ++GKWQ QQLRRLN+HEYQGAELM K+G+NVPKGVA SS  +V+KAIQ
Sbjct: 3   GLVNKLVSRSLSISGKWQNQQLRRLNIHEYQGAELMGKYGVNVPKGVAASSLEEVKKAIQ 62

Query: 338 STFPNEKELVVKSQILAGGRGLGKFTSGLQGGVHIVKVEQAEEIAGKMLGQTLVTKQTGP 517
             FPNE ELVVKSQILAGGRGLG F SGL+GGVHIVK ++AEEIAGKMLGQ LVTKQTGP
Sbjct: 63  DVFPNESELVVKSQILAGGRGLGTFKSGLKGGVHIVKRDEAEEIAGKMLGQVLVTKQTGP 122

Query: 518 QGKVVSKVYLCEKVSLVNEMYFAITLDRTSAGPLIIACREGGTSIEDLAEKFPDMIIKVP 697
           QGKVVSKVYLCEK+SLVNEMYF+I LDR SAGPLIIAC++GGTSIEDLAEKFPDMIIKVP
Sbjct: 123 QGKVVSKVYLCEKLSLVNEMYFSIILDRKSAGPLIIACKKGGTSIEDLAEKFPDMIIKVP 182

Query: 698 IDVFKGITDEDAAKVVDGLAPKVADRNASIEQVKKLYNLFRKADCTQLEINPIAETSDNK 877
           IDVF GITDEDAAKVVDGLAPK ADR  SIEQVKKLY LFRK DCT LEINP+AETS N+
Sbjct: 183 IDVFAGITDEDAAKVVDGLAPKAADRKDSIEQVKKLYELFRKTDCTMLEINPLAETSTNQ 242

Query: 878 LVAADAKLNFDDNAAFR 928
           LVAADAKLNFDDNAAFR
Sbjct: 243 LVAADAKLNFDDNAAFR 259


>gb|AAM65138.1| succinyl-CoA ligase beta subunit [Arabidopsis thaliana]
          Length = 421

 Score =  430 bits (1105), Expect = e-118
 Identities = 215/257 (83%), Positives = 232/257 (90%)
 Frame = +2

Query: 158 GLFNKLASKSLKVAGKWQQQQLRRLNVHEYQGAELMNKFGINVPKGVAVSSAPDVRKAIQ 337
           GL NKL S+SL ++GKWQ QQLRRLN+HEYQGAELM K+G+NVPKGVA SS  +V+KAIQ
Sbjct: 3   GLVNKLVSRSLSISGKWQNQQLRRLNIHEYQGAELMGKYGVNVPKGVAASSLEEVKKAIQ 62

Query: 338 STFPNEKELVVKSQILAGGRGLGKFTSGLQGGVHIVKVEQAEEIAGKMLGQTLVTKQTGP 517
             FPNE ELVVKSQILAGGRGLG F SGL+GGVHIVK ++AEEIAGKMLGQ LVTKQTGP
Sbjct: 63  DVFPNESELVVKSQILAGGRGLGTFKSGLKGGVHIVKRDEAEEIAGKMLGQVLVTKQTGP 122

Query: 518 QGKVVSKVYLCEKVSLVNEMYFAITLDRTSAGPLIIACREGGTSIEDLAEKFPDMIIKVP 697
           QGKVVSKVYLCEK+SLVNEMYF+I LDR SAGPLIIAC++GGTSIEDLAEKFPDMIIKVP
Sbjct: 123 QGKVVSKVYLCEKLSLVNEMYFSIILDRKSAGPLIIACKKGGTSIEDLAEKFPDMIIKVP 182

Query: 698 IDVFKGITDEDAAKVVDGLAPKVADRNASIEQVKKLYNLFRKADCTQLEINPIAETSDNK 877
           IDVF GITDEDAAKVVDGLAPK ADR  SIEQVKKLY LFRK DCT LEINP+AETS N+
Sbjct: 183 IDVFAGITDEDAAKVVDGLAPKAADRKDSIEQVKKLYELFRKTDCTMLEINPLAETSTNQ 242

Query: 878 LVAADAKLNFDDNAAFR 928
           LVAADAKLNFDDNAAFR
Sbjct: 243 LVAADAKLNFDDNAAFR 259


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