BLASTX nr result

ID: Atractylodes22_contig00020534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00020534
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|B1ABS0.1|RBR_HIEPL RecName: Full=Retinoblastoma-related prote...   224   6e-57
sp|B1ABR6.1|RBR_HIEPI RecName: Full=Retinoblastoma-related prote...   222   2e-56
ref|XP_004157544.1| PREDICTED: retinoblastoma-related protein-li...   207   9e-52
ref|XP_004142479.1| PREDICTED: retinoblastoma-related protein-li...   207   9e-52
sp|Q4JF75.1|RBR_SCUBA RecName: Full=Retinoblastoma-related prote...   207   9e-52

>sp|B1ABS0.1|RBR_HIEPL RecName: Full=Retinoblastoma-related protein
            gi|167593891|gb|ABZ85632.1| retinoblastoma-related
            protein [Hieracium pilosella]
          Length = 1008

 Score =  224 bits (571), Expect = 6e-57
 Identities = 112/123 (91%), Positives = 119/123 (96%)
 Frame = +1

Query: 1    GINNLKSKLLSPALQSAFASPTRPNPTGRGETCAETSVNLFFSKIVKLAAVRINGMVERL 180
            GINNLKSK+LSPALQSAFASPTRP+PT RGETC ET+VNLFFSKIVKLAAVRINGMVER+
Sbjct: 689  GINNLKSKILSPALQSAFASPTRPHPT-RGETCGETAVNLFFSKIVKLAAVRINGMVERM 747

Query: 181  QLSQQIRERVYCLFQQILSQRTALFFNRHIDQIILCCFYGVAKISQLSLTFKEIIYYYRK 360
            QL+QQIRERVYCLFQQIL QRT+LFFNRHIDQIILCCFYGVAKISQLSLTFKEII+ YRK
Sbjct: 748  QLTQQIRERVYCLFQQILGQRTSLFFNRHIDQIILCCFYGVAKISQLSLTFKEIIFNYRK 807

Query: 361  QPH 369
            QPH
Sbjct: 808  QPH 810


>sp|B1ABR6.1|RBR_HIEPI RecName: Full=Retinoblastoma-related protein
            gi|167593883|gb|ABZ85628.1| retinoblastoma-related
            protein [Hieracium piloselloides]
          Length = 1005

 Score =  222 bits (566), Expect = 2e-56
 Identities = 111/123 (90%), Positives = 119/123 (96%)
 Frame = +1

Query: 1    GINNLKSKLLSPALQSAFASPTRPNPTGRGETCAETSVNLFFSKIVKLAAVRINGMVERL 180
            GI NLKSK+LSPALQSAFASPTRP+PT RGETCAET+VNLFFSKIVKLAAVRINGMVER+
Sbjct: 689  GIGNLKSKILSPALQSAFASPTRPHPT-RGETCAETAVNLFFSKIVKLAAVRINGMVERM 747

Query: 181  QLSQQIRERVYCLFQQILSQRTALFFNRHIDQIILCCFYGVAKISQLSLTFKEIIYYYRK 360
            QL+QQIRERVYCLFQQIL QRT+LFFNRHIDQIILCCFYGVAKI+QLSLTFKEII+ YRK
Sbjct: 748  QLTQQIRERVYCLFQQILGQRTSLFFNRHIDQIILCCFYGVAKITQLSLTFKEIIFNYRK 807

Query: 361  QPH 369
            QPH
Sbjct: 808  QPH 810


>ref|XP_004157544.1| PREDICTED: retinoblastoma-related protein-like [Cucumis sativus]
          Length = 1125

 Score =  207 bits (526), Expect = 9e-52
 Identities = 100/120 (83%), Positives = 110/120 (91%)
 Frame = +1

Query: 7    NNLKSKLLSPALQSAFASPTRPNPTGRGETCAETSVNLFFSKIVKLAAVRINGMVERLQL 186
            +++KSKLL P LQSAFASPTRPNP G GETCAET +N+FFSKI KLAAVR+NGMVERLQL
Sbjct: 811  SSIKSKLLPPPLQSAFASPTRPNPGGGGETCAETGINIFFSKITKLAAVRVNGMVERLQL 870

Query: 187  SQQIRERVYCLFQQILSQRTALFFNRHIDQIILCCFYGVAKISQLSLTFKEIIYYYRKQP 366
            S QIRE VYCLFQQILSQ+T++ FNRHIDQIILCCFYGVAKISQLSLTF+EIIY YRKQP
Sbjct: 871  SHQIRENVYCLFQQILSQKTSILFNRHIDQIILCCFYGVAKISQLSLTFREIIYNYRKQP 930


>ref|XP_004142479.1| PREDICTED: retinoblastoma-related protein-like [Cucumis sativus]
          Length = 1024

 Score =  207 bits (526), Expect = 9e-52
 Identities = 100/120 (83%), Positives = 110/120 (91%)
 Frame = +1

Query: 7    NNLKSKLLSPALQSAFASPTRPNPTGRGETCAETSVNLFFSKIVKLAAVRINGMVERLQL 186
            +++KSKLL P LQSAFASPTRPNP G GETCAET +N+FFSKI KLAAVR+NGMVERLQL
Sbjct: 710  SSIKSKLLPPPLQSAFASPTRPNPGGGGETCAETGINIFFSKITKLAAVRVNGMVERLQL 769

Query: 187  SQQIRERVYCLFQQILSQRTALFFNRHIDQIILCCFYGVAKISQLSLTFKEIIYYYRKQP 366
            S QIRE VYCLFQQILSQ+T++ FNRHIDQIILCCFYGVAKISQLSLTF+EIIY YRKQP
Sbjct: 770  SHQIRENVYCLFQQILSQKTSILFNRHIDQIILCCFYGVAKISQLSLTFREIIYNYRKQP 829


>sp|Q4JF75.1|RBR_SCUBA RecName: Full=Retinoblastoma-related protein
            gi|70568829|dbj|BAE06273.1| retinoblastoma [Scutellaria
            baicalensis]
          Length = 1006

 Score =  207 bits (526), Expect = 9e-52
 Identities = 102/121 (84%), Positives = 111/121 (91%)
 Frame = +1

Query: 4    INNLKSKLLSPALQSAFASPTRPNPTGRGETCAETSVNLFFSKIVKLAAVRINGMVERLQ 183
            +NNLKSK   P L SAFASPTRP+P G GETCAET+VN+FFSKIVKLAAVRINGMVERLQ
Sbjct: 691  LNNLKSKFPPPILHSAFASPTRPSPGGGGETCAETAVNVFFSKIVKLAAVRINGMVERLQ 750

Query: 184  LSQQIRERVYCLFQQILSQRTALFFNRHIDQIILCCFYGVAKISQLSLTFKEIIYYYRKQ 363
            LSQQIRE VYCLFQ+ILSQRT LFFNRHIDQI+LCCFYGV+KISQL+LTFKEII+ YRKQ
Sbjct: 751  LSQQIRESVYCLFQKILSQRTTLFFNRHIDQILLCCFYGVSKISQLTLTFKEIIFNYRKQ 810

Query: 364  P 366
            P
Sbjct: 811  P 811


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