BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00020467
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]...    67   2e-09
gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]             61   1e-07
sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contain...    61   1e-07
ref|XP_002317407.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]
           gi|82061579|sp|Q91DM0.1|POLG_PVCV1 RecName: Full=Genome
           polyprotein; Contains: RecName: Full=Movement protein;
           Short=MP; Contains: RecName: Full=Capsid protein;
           Short=CP; Contains: RecName: Full=Aspartic protease;
           Short=PR; Contains: RecName: Full=Reverse transcriptase;
           Short=RT gi|14574598|gb|AAK68664.1| ORF I polyprotein
           [petunia vein clearing virus]
          Length = 2179

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 5/164 (3%)
 Frame = +3

Query: 6   DSPNPPQRPCCTVTPFT-----SSSEYQTEFPPLSSFENTQQRTKHEWKIKTPTTIGPTG 170
           D P PP++P  T          +   Y+  FPPLSSF  ++    H  KI     + P+G
Sbjct: 467 DEPIPPKQPFTTRNTLPKIYMFNPLNYENNFPPLSSF--SKDGADHTPKIPKRNVVLPSG 524

Query: 171 VPNTISAAEATLNWQSENAVAQSKVL*TILAXXXXXXXXXXALTSRVQTLDALINEIRDK 350
             +     EAT+NWQ+ENA+AQ+++L TI             +T +      LI  +  +
Sbjct: 525 AKDPTGDLEATVNWQTENALAQNRMLTTIDRTLKETVTKVDRVTDQSSKNQGLIKVLEQQ 584

Query: 351 IQGLHNELLQIVRTIPPSQASNTLTQKEAEMKFLKNQLVDLERQ 482
           +Q L+  +       P +   +   Q+++EM  LK Q+  L+ Q
Sbjct: 585 LQDLNKRICP-----PGTSLFHFFDQQKSEMASLKEQIRLLKEQ 623


>gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]
          Length = 1886

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 5/164 (3%)
 Frame = +3

Query: 6   DSPNPPQRPCCTVTPFT-----SSSEYQTEFPPLSSFENTQQRTKHEWKIKTPTTIGPTG 170
           D P  P +P  T          +   Y+  FPPLSSF  ++    H  KI     + P+G
Sbjct: 468 DEPILPNQPFITRNTLPKIYMFNPLNYENNFPPLSSF--SKDGADHTPKIPKRNVVLPSG 525

Query: 171 VPNTISAAEATLNWQSENAVAQSKVL*TILAXXXXXXXXXXALTSRVQTLDALINEIRDK 350
             +     EAT+NWQ+ENA+AQ+++L TI             ++ +      LI  +  +
Sbjct: 526 AKDPTGDLEATVNWQTENALAQNRMLTTIDRTLKETVTKVDRVSDQSSKNQGLIRVLEQQ 585

Query: 351 IQGLHNELLQIVRTIPPSQASNTLTQKEAEMKFLKNQLVDLERQ 482
           +Q L+  +       P +   +   Q+++EM  LK Q+  L+ Q
Sbjct: 586 LQDLNKRICP-----PGTSLFHFFDQQKSEMASLKEQIRLLKEQ 624


>sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Movement
           protein; Short=MP; Contains: RecName: Full=Capsid
           protein; Short=CP; Contains: RecName: Full=Aspartic
           protease; Short=PR; Contains: RecName: Full=Reverse
           transcriptase; Short=RT gi|34328896|gb|AAO67368.1|
           polyprotein 1 [Petunia vein clearing virus]
          Length = 2180

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 5/164 (3%)
 Frame = +3

Query: 6   DSPNPPQRPCCTVTPFT-----SSSEYQTEFPPLSSFENTQQRTKHEWKIKTPTTIGPTG 170
           D P  P +P  T          +   Y+  FPPLSSF  ++    H  KI     + P+G
Sbjct: 468 DEPILPNQPFITRNTLPKIYMFNPLNYENNFPPLSSF--SKDGADHTPKIPKRNVVLPSG 525

Query: 171 VPNTISAAEATLNWQSENAVAQSKVL*TILAXXXXXXXXXXALTSRVQTLDALINEIRDK 350
             +     EAT+NWQ+ENA+AQ+++L TI             ++ +      LI  +  +
Sbjct: 526 AKDPTGDLEATVNWQTENALAQNRMLTTIDRTLKETVTKVDRVSDQSSKNQGLIRVLEQQ 585

Query: 351 IQGLHNELLQIVRTIPPSQASNTLTQKEAEMKFLKNQLVDLERQ 482
           +Q L+  +       P +   +   Q+++EM  LK Q+  L+ Q
Sbjct: 586 LQDLNKRICP-----PGTSLFHFFDQQKSEMASLKEQIRLLKEQ 624


>ref|XP_002317407.1| predicted protein [Populus trichocarpa] gi|222860472|gb|EEE98019.1|
           predicted protein [Populus trichocarpa]
          Length = 950

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 46/142 (32%), Positives = 72/142 (50%), Gaps = 10/142 (7%)
 Frame = +3

Query: 87  PLSSFENTQQRTKHEWKIKT-PTTIGPTGV-----PNTISAAEATLNWQSENAVAQSKVL 248
           P    +++ Q+ K + +++T P    P GV     P  ++ AEA LNWQS+NA+AQ+ VL
Sbjct: 308 PKQKRKSSGQKLKVKDRVRTLPQVHNPLGVDVDGRPKQVTQAEAVLNWQSQNAIAQNYVL 367

Query: 249 *TILAXXXXXXXXXXALT----SRVQTLDALINEIRDKIQGLHNELLQIVRTIPPSQASN 416
             I +           +T    SR+ TL+ L  EI+ +I  +H  LL     +  S   +
Sbjct: 368 HRIESKVDLVQTNLKKMTVSIDSRILTLEQLCAEIQQRISTIHEYLL-----LQASNGRH 422

Query: 417 TLTQKEAEMKFLKNQLVDLERQ 482
              QKE E++ LK QL  L+ +
Sbjct: 423 VDPQKEHEIQSLKIQLKSLQAE 444