BLASTX nr result
ID: Atractylodes22_contig00020329
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00020329
(899 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265695.1| PREDICTED: psbP domain-containing protein 4,... 214 8e-92
ref|XP_002300943.1| predicted protein [Populus trichocarpa] gi|2... 218 9e-90
ref|XP_002526176.1| Thylakoid lumenal 29.8 kDa protein, chloropl... 212 8e-88
ref|NP_565149.2| PsbP domain-containing protein 4 [Arabidopsis t... 206 3e-86
ref|XP_003578812.1| PREDICTED: psbP domain-containing protein 4,... 205 7e-86
>ref|XP_002265695.1| PREDICTED: psbP domain-containing protein 4, chloroplastic [Vitis
vinifera] gi|302142754|emb|CBI19957.3| unnamed protein
product [Vitis vinifera]
Length = 279
Score = 214 bits (544), Expect(3) = 8e-92
Identities = 105/129 (81%), Positives = 116/129 (89%)
Frame = -3
Query: 447 ADLGGTEIDLRFGNPSEGRLFVIVAPVLRFADYLEDDARIERIGPPEKVINAFGPEVIGE 268
ADLGGTEIDLRF N EGRLFVIVAPVLRFAD L DDA++E+IGPPEKVI AFGPEVIGE
Sbjct: 151 ADLGGTEIDLRFANSKEGRLFVIVAPVLRFADNLGDDAKVEKIGPPEKVIAAFGPEVIGE 210
Query: 267 NVEGKVMNSQVKEYSGRKYYQFELEPPHCLITATAAGNRLYLFNVLANGLQWKRHNQELK 88
NVEGKV++ V E+SGR YYQFELEPPH LITATAAGNRLYLF+V A+GLQWKRH ++LK
Sbjct: 211 NVEGKVLSMGVVEHSGRTYYQFELEPPHVLITATAAGNRLYLFSVTASGLQWKRHYKDLK 270
Query: 87 KIADSFRIV 61
KIADSFR+V
Sbjct: 271 KIADSFRVV 279
Score = 98.6 bits (244), Expect(3) = 8e-92
Identities = 42/46 (91%), Positives = 43/46 (93%)
Frame = -1
Query: 632 RGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPDGWEETPVSIADLGG 495
+GWRTYRRPDEKSGGHGVGWSPIIPY FSVP GWEE PVSIADLGG
Sbjct: 110 QGWRTYRRPDEKSGGHGVGWSPIIPYIFSVPSGWEEVPVSIADLGG 155
Score = 73.6 bits (179), Expect(3) = 8e-92
Identities = 39/59 (66%), Positives = 47/59 (79%), Gaps = 2/59 (3%)
Frame = -2
Query: 802 WVSANSEENGEVLGRRKAIVSGVS--SAIMLGFPREGVAVVKQGLLAGRIPGLSEPDQQ 632
+V +E+ L RR AIVSGVS S+ +LGFPREG+AVVKQGLLAGR+PGLSEPD+Q
Sbjct: 52 FVDEETEKFSGFLKRRSAIVSGVSLISSAVLGFPREGLAVVKQGLLAGRVPGLSEPDEQ 110
>ref|XP_002300943.1| predicted protein [Populus trichocarpa] gi|222842669|gb|EEE80216.1|
predicted protein [Populus trichocarpa]
Length = 276
Score = 218 bits (554), Expect(3) = 9e-90
Identities = 105/129 (81%), Positives = 118/129 (91%)
Frame = -3
Query: 447 ADLGGTEIDLRFGNPSEGRLFVIVAPVLRFADYLEDDARIERIGPPEKVINAFGPEVIGE 268
ADLGGTEIDLRFG+ EGRLFVIVAPVLRFADYL ++A IE+IGPPEKVINAFGPEVIGE
Sbjct: 148 ADLGGTEIDLRFGSSKEGRLFVIVAPVLRFADYLGENATIEQIGPPEKVINAFGPEVIGE 207
Query: 267 NVEGKVMNSQVKEYSGRKYYQFELEPPHCLITATAAGNRLYLFNVLANGLQWKRHNQELK 88
NVEGKV++ V+E+SGR+YYQ+ELEPPH LITATAAGNRLYLFNV NGLQWKRH Q+LK
Sbjct: 208 NVEGKVLSMNVEEHSGRRYYQYELEPPHALITATAAGNRLYLFNVTGNGLQWKRHYQDLK 267
Query: 87 KIADSFRIV 61
+IA SFR+V
Sbjct: 268 RIAYSFRVV 276
Score = 97.4 bits (241), Expect(3) = 9e-90
Identities = 41/46 (89%), Positives = 43/46 (93%)
Frame = -1
Query: 632 RGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPDGWEETPVSIADLGG 495
+GWRTYRRPD+KSGGHGVGWSPIIPY FSVP GWEE PVSIADLGG
Sbjct: 107 QGWRTYRRPDDKSGGHGVGWSPIIPYLFSVPQGWEEVPVSIADLGG 152
Score = 63.9 bits (154), Expect(3) = 9e-90
Identities = 36/68 (52%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Frame = -2
Query: 829 VAACSNERVWVSANSEENGEVLGRRKAIVSGVS--SAIMLGFPREGVAVVKQGLLAGRIP 656
+ A S + ++ +E++ L RR +VSGVS S +LG EG+AVVKQGLLAGRIP
Sbjct: 40 ITAESRKNGFLDGENEKSAGFLKRRSVLVSGVSLVSTSVLGSAGEGLAVVKQGLLAGRIP 99
Query: 655 GLSEPDQQ 632
GLSEPD Q
Sbjct: 100 GLSEPDDQ 107
>ref|XP_002526176.1| Thylakoid lumenal 29.8 kDa protein, chloroplast precursor, putative
[Ricinus communis] gi|223534553|gb|EEF36252.1| Thylakoid
lumenal 29.8 kDa protein, chloroplast precursor,
putative [Ricinus communis]
Length = 270
Score = 212 bits (539), Expect(3) = 8e-88
Identities = 104/129 (80%), Positives = 115/129 (89%)
Frame = -3
Query: 447 ADLGGTEIDLRFGNPSEGRLFVIVAPVLRFADYLEDDARIERIGPPEKVINAFGPEVIGE 268
ADLGGTEIDLRF + EGRLFVIVAPVLRFAD L D+A IERIGPPEKVINAFGPEVIGE
Sbjct: 142 ADLGGTEIDLRFSSSKEGRLFVIVAPVLRFADDLGDNATIERIGPPEKVINAFGPEVIGE 201
Query: 267 NVEGKVMNSQVKEYSGRKYYQFELEPPHCLITATAAGNRLYLFNVLANGLQWKRHNQELK 88
NVEGKV++ V E+SGR YYQFELEPPH LITATAAGNRLYLF+V NGLQWKRH ++LK
Sbjct: 202 NVEGKVLSMNVAEHSGRMYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQWKRHYKDLK 261
Query: 87 KIADSFRIV 61
+IA+SFR+V
Sbjct: 262 RIAESFRVV 270
Score = 94.7 bits (234), Expect(3) = 8e-88
Identities = 40/46 (86%), Positives = 42/46 (91%)
Frame = -1
Query: 632 RGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPDGWEETPVSIADLGG 495
+GWRTYRRPD+KSGGHGVGWSPIIPYAF VP WEE PVSIADLGG
Sbjct: 101 QGWRTYRRPDDKSGGHGVGWSPIIPYAFKVPQEWEEVPVSIADLGG 146
Score = 65.9 bits (159), Expect(3) = 8e-88
Identities = 33/48 (68%), Positives = 41/48 (85%), Gaps = 2/48 (4%)
Frame = -2
Query: 769 VLGRRKAIVSGVS--SAIMLGFPREGVAVVKQGLLAGRIPGLSEPDQQ 632
+L RR A+VSG+S S+ +LGFP +G+A VKQGLLAGRIPGLSEPD+Q
Sbjct: 54 LLKRRSALVSGISLASSTILGFPGDGLAAVKQGLLAGRIPGLSEPDEQ 101
>ref|NP_565149.2| PsbP domain-containing protein 4 [Arabidopsis thaliana]
gi|190358910|sp|O49292.2|PPD4_ARATH RecName: Full=PsbP
domain-containing protein 4, chloroplastic; AltName:
Full=OEC23-like protein 5; Flags: Precursor
gi|332197812|gb|AEE35933.1| PsbP domain-containing
protein 4 [Arabidopsis thaliana]
Length = 260
Score = 206 bits (524), Expect(3) = 3e-86
Identities = 102/129 (79%), Positives = 111/129 (86%)
Frame = -3
Query: 447 ADLGGTEIDLRFGNPSEGRLFVIVAPVLRFADYLEDDARIERIGPPEKVINAFGPEVIGE 268
ADLGGTEIDLRF +P EGRL VIVAPVLRFAD L DD +IE IG P KVINAFGPEVIGE
Sbjct: 132 ADLGGTEIDLRFASPKEGRLSVIVAPVLRFADNLGDDVKIENIGQPAKVINAFGPEVIGE 191
Query: 267 NVEGKVMNSQVKEYSGRKYYQFELEPPHCLITATAAGNRLYLFNVLANGLQWKRHNQELK 88
NVEGKV++S V E+ GR YYQFELEPPH LITATAAGNRLYLF+V NGLQWKRH ++LK
Sbjct: 192 NVEGKVLSSNVAEHDGRLYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQWKRHYKDLK 251
Query: 87 KIADSFRIV 61
+IA SFRIV
Sbjct: 252 RIASSFRIV 260
Score = 95.5 bits (236), Expect(3) = 3e-86
Identities = 41/45 (91%), Positives = 41/45 (91%)
Frame = -1
Query: 629 GWRTYRRPDEKSGGHGVGWSPIIPYAFSVPDGWEETPVSIADLGG 495
GWRTYRRPDEKSGGHGVGWSPIIPYAFSVP W E PVSIADLGG
Sbjct: 92 GWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQDWNEVPVSIADLGG 136
Score = 65.9 bits (159), Expect(3) = 3e-86
Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = -2
Query: 880 GVTSFSFSLKQSKQMPAVAACSNERVWVSANSEENGEVLGRRKAIVSG-VSSAIMLGFPR 704
G S + + ++P + E W + VL RR + SG VSS L FPR
Sbjct: 15 GHKKISAHQRSNSEIPKTSPGGCEDEWCA-------RVLSRRSVMASGLVSSTTALAFPR 67
Query: 703 EGVAVVKQGLLAGRIPGLSEPDQQ 632
EG+AVVKQGLLAGR+PGLSEPD++
Sbjct: 68 EGLAVVKQGLLAGRVPGLSEPDEE 91
>ref|XP_003578812.1| PREDICTED: psbP domain-containing protein 4, chloroplastic-like
[Brachypodium distachyon]
Length = 268
Score = 205 bits (522), Expect(3) = 7e-86
Identities = 102/129 (79%), Positives = 112/129 (86%)
Frame = -3
Query: 447 ADLGGTEIDLRFGNPSEGRLFVIVAPVLRFADYLEDDARIERIGPPEKVINAFGPEVIGE 268
ADLGGTEIDLRFGNP EGRL VIVAP RFAD L DDA IE+IG P KVINAFGPEVIGE
Sbjct: 141 ADLGGTEIDLRFGNPKEGRLSVIVAPTARFADNL-DDATIEKIGSPAKVINAFGPEVIGE 199
Query: 267 NVEGKVMNSQVKEYSGRKYYQFELEPPHCLITATAAGNRLYLFNVLANGLQWKRHNQELK 88
NVEGKV+++ EYSGR YYQFELEPPH ITATAAGNRLYLF+V ANGLQWKRH ++LK
Sbjct: 200 NVEGKVLSTATSEYSGRTYYQFELEPPHIFITATAAGNRLYLFSVTANGLQWKRHYKDLK 259
Query: 87 KIADSFRIV 61
+IA+SFR+V
Sbjct: 260 QIAESFRVV 268
Score = 99.0 bits (245), Expect(3) = 7e-86
Identities = 42/45 (93%), Positives = 43/45 (95%)
Frame = -1
Query: 629 GWRTYRRPDEKSGGHGVGWSPIIPYAFSVPDGWEETPVSIADLGG 495
GWRTYRRPDEKSGGHGVGWSPIIPY+F VP GWEETPVSIADLGG
Sbjct: 101 GWRTYRRPDEKSGGHGVGWSPIIPYSFKVPGGWEETPVSIADLGG 145
Score = 61.6 bits (148), Expect(3) = 7e-86
Identities = 41/90 (45%), Positives = 54/90 (60%), Gaps = 11/90 (12%)
Frame = -2
Query: 871 SFSFSLKQSKQMPAVAA-------CSNERVWVSANSEENGEV--LGRRKAIVSGVSSA-- 725
S S SL +KQ+PA CS+ + EE+ V +GRR A+ S ++
Sbjct: 10 SSSSSLFLTKQIPAAKGRAAAAVRCSSGPTLSGTHEEESERVALVGRRHALASTAAACGV 69
Query: 724 IMLGFPREGVAVVKQGLLAGRIPGLSEPDQ 635
+LGF +G+AVVKQGLLAGRIPGLSEPD+
Sbjct: 70 SVLGFAGDGLAVVKQGLLAGRIPGLSEPDE 99