BLASTX nr result

ID: Atractylodes22_contig00020328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00020328
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510047.1| DNA binding protein, putative [Ricinus commu...    62   1e-19
ref|XP_002306505.1| predicted protein [Populus trichocarpa] gi|2...    61   9e-19
ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Viti...    62   4e-16
ref|XP_002302386.1| predicted protein [Populus trichocarpa] gi|2...    61   7e-16
ref|XP_003556954.1| PREDICTED: transcription factor bHLH74-like ...    62   7e-15

>ref|XP_002510047.1| DNA binding protein, putative [Ricinus communis]
           gi|223550748|gb|EEF52234.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 408

 Score = 62.0 bits (149), Expect(2) = 1e-19
 Identities = 30/39 (76%), Positives = 34/39 (87%)
 Frame = -3

Query: 171 SQSGQATYSHSLAERVRRERIGERMKLPQELVPGCNKKT 55
           ++ GQAT SHSLAERVRRE+I ERM+L QELVPGCNK T
Sbjct: 244 ARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKIT 282



 Score = 58.9 bits (141), Expect(2) = 1e-19
 Identities = 34/61 (55%), Positives = 39/61 (63%), Gaps = 6/61 (9%)
 Frame = -1

Query: 329 EQRNDGSGNTSKNMSVQDEKKQRIEHGI---VRGKQ---QAKDNSDSGGAPKDNYIHVRA 168
           E   D SGN+S     QDEKK R E      +RGKQ   QAK+NS SG APK+NYIHVRA
Sbjct: 185 EMHKDPSGNSSDIPKEQDEKKSRTEQNTAANLRGKQAAKQAKENSHSGEAPKENYIHVRA 244

Query: 167 K 165
           +
Sbjct: 245 R 245


>ref|XP_002306505.1| predicted protein [Populus trichocarpa] gi|222855954|gb|EEE93501.1|
           predicted protein [Populus trichocarpa]
          Length = 407

 Score = 61.2 bits (147), Expect(2) = 9e-19
 Identities = 29/39 (74%), Positives = 34/39 (87%)
 Frame = -3

Query: 171 SQSGQATYSHSLAERVRRERIGERMKLPQELVPGCNKKT 55
           ++ GQAT SHSLAERVRRE+I ERM++ QELVPGCNK T
Sbjct: 242 ARRGQATNSHSLAERVRREKISERMRMLQELVPGCNKIT 280



 Score = 57.0 bits (136), Expect(2) = 9e-19
 Identities = 34/63 (53%), Positives = 40/63 (63%), Gaps = 6/63 (9%)
 Frame = -1

Query: 335 EREQRNDGSGNTSKNMSVQDEKKQRIEHGI---VRGKQ---QAKDNSDSGGAPKDNYIHV 174
           E E + D SG +S      DEKKQ+IE      +RGKQ   QAKDN  SG APKD+YIHV
Sbjct: 181 EGEFQKDPSGESSDIAKELDEKKQKIEQNCSANLRGKQVAKQAKDNPQSGEAPKDDYIHV 240

Query: 173 RAK 165
           RA+
Sbjct: 241 RAR 243


>ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Vitis vinifera]
           gi|302142156|emb|CBI19359.3| unnamed protein product
           [Vitis vinifera]
          Length = 430

 Score = 62.0 bits (149), Expect(2) = 4e-16
 Identities = 30/39 (76%), Positives = 34/39 (87%)
 Frame = -3

Query: 171 SQSGQATYSHSLAERVRRERIGERMKLPQELVPGCNKKT 55
           ++ GQAT SHSLAERVRRE+I ERM+L QELVPGCNK T
Sbjct: 267 ARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKIT 305



 Score = 47.4 bits (111), Expect(2) = 4e-16
 Identities = 25/45 (55%), Positives = 33/45 (73%), Gaps = 6/45 (13%)
 Frame = -1

Query: 281 QDEKKQRIEHGI---VRGKQ---QAKDNSDSGGAPKDNYIHVRAK 165
           Q+EKK +I+  +   +RGKQ    AKDNS +G APK+NYIHVRA+
Sbjct: 224 QEEKKLKIDQNMSPNLRGKQPNKHAKDNSSNGEAPKENYIHVRAR 268


>ref|XP_002302386.1| predicted protein [Populus trichocarpa] gi|222844112|gb|EEE81659.1|
           predicted protein [Populus trichocarpa]
          Length = 330

 Score = 61.2 bits (147), Expect(2) = 7e-16
 Identities = 29/39 (74%), Positives = 34/39 (87%)
 Frame = -3

Query: 171 SQSGQATYSHSLAERVRRERIGERMKLPQELVPGCNKKT 55
           ++ GQAT SHSLAERVRRE+I ERM++ QELVPGCNK T
Sbjct: 165 ARRGQATNSHSLAERVRREKISERMRMLQELVPGCNKIT 203



 Score = 47.4 bits (111), Expect(2) = 7e-16
 Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
 Frame = -1

Query: 335 EREQRNDGSGNTSKNMSVQDEKKQRIEHGI---VRGKQ---QAKDNSDSGGAPKDNYIHV 174
           E E R D SG +       DEK Q+ E      +RGKQ   QAKD++ SG  PK+NY HV
Sbjct: 104 EGELRKDLSGESCDIAKELDEKTQKTEQNPGPNLRGKQAAKQAKDDTQSGEVPKENYFHV 163

Query: 173 RAK 165
           RA+
Sbjct: 164 RAR 166


>ref|XP_003556954.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
          Length = 435

 Score = 62.0 bits (149), Expect(2) = 7e-15
 Identities = 30/39 (76%), Positives = 34/39 (87%)
 Frame = -3

Query: 171 SQSGQATYSHSLAERVRRERIGERMKLPQELVPGCNKKT 55
           ++ GQAT SHSLAERVRRE+I ERM+L QELVPGCNK T
Sbjct: 271 ARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKIT 309



 Score = 43.1 bits (100), Expect(2) = 7e-15
 Identities = 30/65 (46%), Positives = 38/65 (58%), Gaps = 8/65 (12%)
 Frame = -1

Query: 335 EREQRNDGSGNTSKNMSVQDEKKQRIEHGI---VRGKQ---QAKDN--SDSGGAPKDNYI 180
           E +   D  G  S   S + EK+ ++E      VRGKQ   QAKDN  S SG APK+N+I
Sbjct: 209 EGDAVKDSPGKASDG-SKEHEKRPKVEQNNGADVRGKQSVKQAKDNNNSQSGEAPKENFI 267

Query: 179 HVRAK 165
           HVRA+
Sbjct: 268 HVRAR 272


Top