BLASTX nr result

ID: Atractylodes22_contig00020325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00020325
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269953.1| PREDICTED: uncharacterized protein LOC100255...   197   9e-49
ref|XP_004144648.1| PREDICTED: mediator of RNA polymerase II tra...   192   4e-47
ref|NP_001236135.1| uncharacterized protein LOC100306257 [Glycin...   181   8e-44
gb|AFK33474.1| unknown [Lotus japonicus]                              178   5e-43
ref|XP_003521318.1| PREDICTED: uncharacterized protein LOC100792...   178   7e-43

>ref|XP_002269953.1| PREDICTED: uncharacterized protein LOC100255926 [Vitis vinifera]
           gi|297734129|emb|CBI15376.3| unnamed protein product
           [Vitis vinifera]
          Length = 115

 Score =  197 bits (502), Expect = 9e-49
 Identities = 92/114 (80%), Positives = 105/114 (92%)
 Frame = -2

Query: 588 MDSQSQNASLQRLQTVEKRIVRVLELAGGVMEEFSNPSGPRKELVNNHCSEFMQLIKDIQ 409
           MDSQ+ N SLQRLQ VEKRI++VLELAGGVM+E  NPSGPRKEL++ HC EFMQLIKDIQ
Sbjct: 1   MDSQTPNTSLQRLQNVEKRIIKVLELAGGVMDELCNPSGPRKELLSIHCGEFMQLIKDIQ 60

Query: 408 VTLREEIKSACEYRPFEKCDYIARLSNEICCKKVEYVVEKLDGMKETIDEYHGA 247
           +TLR+EIKSACEYRPFEKCDYI+R+SNEICCKK+EYV+ +LDGMKETIDEYH A
Sbjct: 61  MTLRDEIKSACEYRPFEKCDYISRISNEICCKKLEYVISQLDGMKETIDEYHDA 114


>ref|XP_004144648.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           11-like [Cucumis sativus]
           gi|449504225|ref|XP_004162288.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 11-like [Cucumis
           sativus]
          Length = 118

 Score =  192 bits (488), Expect = 4e-47
 Identities = 89/111 (80%), Positives = 101/111 (90%)
 Frame = -2

Query: 588 MDSQSQNASLQRLQTVEKRIVRVLELAGGVMEEFSNPSGPRKELVNNHCSEFMQLIKDIQ 409
           MD  + N SLQRLQ VEKRIVRVLELAGGVMEE +NP+GPRKE VNNHCSEFMQ IKDIQ
Sbjct: 1   MDPPAHNTSLQRLQNVEKRIVRVLELAGGVMEELANPAGPRKEFVNNHCSEFMQFIKDIQ 60

Query: 408 VTLREEIKSACEYRPFEKCDYIARLSNEICCKKVEYVVEKLDGMKETIDEY 256
           VTLR+EIKSACEYRPFEKCDY +R++NE+CCKK+EY+V KLDGMK+TID+Y
Sbjct: 61  VTLRDEIKSACEYRPFEKCDYSSRITNELCCKKLEYMVSKLDGMKQTIDDY 111


>ref|NP_001236135.1| uncharacterized protein LOC100306257 [Glycine max]
           gi|255628025|gb|ACU14357.1| unknown [Glycine max]
          Length = 115

 Score =  181 bits (459), Expect = 8e-44
 Identities = 85/114 (74%), Positives = 100/114 (87%)
 Frame = -2

Query: 588 MDSQSQNASLQRLQTVEKRIVRVLELAGGVMEEFSNPSGPRKELVNNHCSEFMQLIKDIQ 409
           MDSQ Q  SLQRLQ VEKRIV+VLELAGGVM+E ++P GPRK++V NHC EFMQLIKDIQ
Sbjct: 1   MDSQGQTTSLQRLQNVEKRIVKVLELAGGVMDELASPVGPRKDVVQNHCLEFMQLIKDIQ 60

Query: 408 VTLREEIKSACEYRPFEKCDYIARLSNEICCKKVEYVVEKLDGMKETIDEYHGA 247
           V LR+EIKSACEYRPFEKCDY +R++NEIC KKVE+++ +LD MK+TIDEYH A
Sbjct: 61  VALRDEIKSACEYRPFEKCDYGSRIANEICHKKVEFIMSQLDAMKQTIDEYHAA 114


>gb|AFK33474.1| unknown [Lotus japonicus]
          Length = 115

 Score =  178 bits (452), Expect = 5e-43
 Identities = 84/114 (73%), Positives = 99/114 (86%)
 Frame = -2

Query: 588 MDSQSQNASLQRLQTVEKRIVRVLELAGGVMEEFSNPSGPRKELVNNHCSEFMQLIKDIQ 409
           MD Q Q  SLQRLQ VEKRIV+VLELAGGVM+E ++P GPRK++V NHC EFMQLIKDIQ
Sbjct: 1   MDPQGQTTSLQRLQNVEKRIVKVLELAGGVMDELASPLGPRKDVVQNHCLEFMQLIKDIQ 60

Query: 408 VTLREEIKSACEYRPFEKCDYIARLSNEICCKKVEYVVEKLDGMKETIDEYHGA 247
           V LR+EIKSACEYRPFEKCDY +R++NEIC +KVE+V+ +LD MK+TIDEYH A
Sbjct: 61  VALRDEIKSACEYRPFEKCDYGSRIANEICYQKVEFVMSQLDAMKQTIDEYHAA 114


>ref|XP_003521318.1| PREDICTED: uncharacterized protein LOC100792126 [Glycine max]
          Length = 115

 Score =  178 bits (451), Expect = 7e-43
 Identities = 83/114 (72%), Positives = 100/114 (87%)
 Frame = -2

Query: 588 MDSQSQNASLQRLQTVEKRIVRVLELAGGVMEEFSNPSGPRKELVNNHCSEFMQLIKDIQ 409
           MDSQ Q  SLQRLQ VEKRIV+VLELAGGVM+E ++P GPRK++V NHC EFMQLIKDIQ
Sbjct: 1   MDSQGQTTSLQRLQNVEKRIVKVLELAGGVMDELASPVGPRKDVVQNHCLEFMQLIKDIQ 60

Query: 408 VTLREEIKSACEYRPFEKCDYIARLSNEICCKKVEYVVEKLDGMKETIDEYHGA 247
           V LR+EIKSACEYRPFEKCDY +R++NEIC KKVE+++ +LD +K+T+DEYH A
Sbjct: 61  VALRDEIKSACEYRPFEKCDYGSRIANEICHKKVEFIMSQLDAIKQTVDEYHVA 114


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