BLASTX nr result

ID: Atractylodes22_contig00020267 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00020267
         (745 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509912.1| 50S ribosomal protein L18, chloroplast precu...   223   4e-56
ref|XP_002314349.1| predicted protein [Populus trichocarpa] gi|1...   223   4e-56
ref|XP_002334329.1| predicted protein [Populus trichocarpa] gi|2...   219   6e-55
ref|NP_175268.1| 50S ribosomal protein L18 [Arabidopsis thaliana...   218   1e-54
ref|XP_002891426.1| ribosomal protein L18 family protein [Arabid...   218   1e-54

>ref|XP_002509912.1| 50S ribosomal protein L18, chloroplast precursor, putative [Ricinus
           communis] gi|223549811|gb|EEF51299.1| 50S ribosomal
           protein L18, chloroplast precursor, putative [Ricinus
           communis]
          Length = 164

 Score =  223 bits (567), Expect = 4e-56
 Identities = 106/125 (84%), Positives = 119/125 (95%)
 Frame = +2

Query: 182 VEASARTRQDNRKARHVRIRKKVEGTPERPRLCVFRSNKHIYVQVIDDTKMHTLASASTK 361
           +EA+ +TR++NR ARHVRIRKKVEGTPERPRL VFRSNKH+YVQVIDD+KMHTLASAST 
Sbjct: 40  IEANTKTRRENRTARHVRIRKKVEGTPERPRLSVFRSNKHLYVQVIDDSKMHTLASASTM 99

Query: 362 QKPLSEEFDYSSGPTIDVAKKVGEAIAKSCMEKGITAVAFDRGGYPYHGRIQALADAARE 541
           QKP+SEEFDYSSGPT++VAKKVGE IAKSC+EKGIT VAFDRGGYPYHGRI+ALADAARE
Sbjct: 100 QKPISEEFDYSSGPTLEVAKKVGEVIAKSCLEKGITKVAFDRGGYPYHGRIEALADAARE 159

Query: 542 HGLQF 556
           +GLQF
Sbjct: 160 NGLQF 164


>ref|XP_002314349.1| predicted protein [Populus trichocarpa] gi|118487426|gb|ABK95541.1|
           unknown [Populus trichocarpa]
           gi|222863389|gb|EEF00520.1| predicted protein [Populus
           trichocarpa]
          Length = 165

 Score =  223 bits (567), Expect = 4e-56
 Identities = 105/125 (84%), Positives = 118/125 (94%)
 Frame = +2

Query: 182 VEASARTRQDNRKARHVRIRKKVEGTPERPRLCVFRSNKHIYVQVIDDTKMHTLASASTK 361
           VEA A+TR+++R ARH+RIRKKVEGTP+RPRLCVFRSNKH+YVQVIDDTKMHTLASAST 
Sbjct: 41  VEAKAKTRREDRTARHIRIRKKVEGTPDRPRLCVFRSNKHLYVQVIDDTKMHTLASASTM 100

Query: 362 QKPLSEEFDYSSGPTIDVAKKVGEAIAKSCMEKGITAVAFDRGGYPYHGRIQALADAARE 541
           QKP +++FDYSSGPTIDVAKKVGE IAKSC+EKGIT VAFDRGGYPYHGR+ ALADAARE
Sbjct: 101 QKPFAQDFDYSSGPTIDVAKKVGEVIAKSCLEKGITKVAFDRGGYPYHGRVAALADAARE 160

Query: 542 HGLQF 556
           +GLQF
Sbjct: 161 NGLQF 165


>ref|XP_002334329.1| predicted protein [Populus trichocarpa] gi|222871392|gb|EEF08523.1|
           predicted protein [Populus trichocarpa]
          Length = 165

 Score =  219 bits (557), Expect = 6e-55
 Identities = 103/124 (83%), Positives = 116/124 (93%)
 Frame = +2

Query: 185 EASARTRQDNRKARHVRIRKKVEGTPERPRLCVFRSNKHIYVQVIDDTKMHTLASASTKQ 364
           EA  +TR+++R ARH+RIRKKVEGTP+RPRLCVFRSNKH+YVQVIDDTKMHTLASAST Q
Sbjct: 42  EAKPQTRREDRTARHIRIRKKVEGTPDRPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQ 101

Query: 365 KPLSEEFDYSSGPTIDVAKKVGEAIAKSCMEKGITAVAFDRGGYPYHGRIQALADAAREH 544
           KP +++FDYSSGPTIDVAKKVGE IAKSC+EKGIT VAFDRGGYPYHGR+ ALADAARE+
Sbjct: 102 KPFAQDFDYSSGPTIDVAKKVGEVIAKSCLEKGITKVAFDRGGYPYHGRVAALADAAREN 161

Query: 545 GLQF 556
           GLQF
Sbjct: 162 GLQF 165


>ref|NP_175268.1| 50S ribosomal protein L18 [Arabidopsis thaliana]
           gi|73621536|sp|Q9SX68.1|RK18_ARATH RecName: Full=50S
           ribosomal protein L18, chloroplastic; AltName:
           Full=CL18; Flags: Precursor
           gi|5733872|gb|AAD49760.1|AC007932_8 Similar to 50S
           Ribosomal protein L18 from Thermotoga maritima
           gb|AE001798. ESTs gb|AI993387, gb|T75951 and gb|T22182
           come from this gene [Arabidopsis thaliana]
           gi|12484209|gb|AAG54003.1|AF336922_1 putative ribosomal
           protein L18 [Arabidopsis thaliana]
           gi|110740956|dbj|BAE98573.1| hypothetical protein
           [Arabidopsis thaliana] gi|332194156|gb|AEE32277.1| 50S
           ribosomal protein L18 [Arabidopsis thaliana]
          Length = 170

 Score =  218 bits (555), Expect = 1e-54
 Identities = 105/126 (83%), Positives = 115/126 (91%)
 Frame = +2

Query: 179 IVEASARTRQDNRKARHVRIRKKVEGTPERPRLCVFRSNKHIYVQVIDDTKMHTLASAST 358
           +VEA  +T  ++R ARH RIRKKV GT ERPRLCVFRSNKH+YVQVIDDTKMHTLASAST
Sbjct: 45  VVEAKTKTSSEDRIARHSRIRKKVNGTTERPRLCVFRSNKHLYVQVIDDTKMHTLASAST 104

Query: 359 KQKPLSEEFDYSSGPTIDVAKKVGEAIAKSCMEKGITAVAFDRGGYPYHGRIQALADAAR 538
           KQKP+SEEFDY+SGPTI+VAKKVGE IAKSC+EKGIT VAFDRGGYPYHGRI+ALA AAR
Sbjct: 105 KQKPISEEFDYTSGPTIEVAKKVGEVIAKSCLEKGITKVAFDRGGYPYHGRIEALAAAAR 164

Query: 539 EHGLQF 556
           EHGLQF
Sbjct: 165 EHGLQF 170


>ref|XP_002891426.1| ribosomal protein L18 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297337268|gb|EFH67685.1| ribosomal protein
           L18 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 170

 Score =  218 bits (555), Expect = 1e-54
 Identities = 105/126 (83%), Positives = 115/126 (91%)
 Frame = +2

Query: 179 IVEASARTRQDNRKARHVRIRKKVEGTPERPRLCVFRSNKHIYVQVIDDTKMHTLASAST 358
           +VEA  +T  ++R ARH RIRKKV GT ERPRLCVFRSNKH+YVQVIDDTKMHTLASAST
Sbjct: 45  VVEAKTKTSSEDRIARHSRIRKKVNGTTERPRLCVFRSNKHLYVQVIDDTKMHTLASAST 104

Query: 359 KQKPLSEEFDYSSGPTIDVAKKVGEAIAKSCMEKGITAVAFDRGGYPYHGRIQALADAAR 538
           KQKP+SEEFDY+SGPTI+VAKKVGE IAKSC+EKGIT VAFDRGGYPYHGRI+ALA AAR
Sbjct: 105 KQKPISEEFDYTSGPTIEVAKKVGEVIAKSCLEKGITKVAFDRGGYPYHGRIEALAAAAR 164

Query: 539 EHGLQF 556
           EHGLQF
Sbjct: 165 EHGLQF 170


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