BLASTX nr result

ID: Atractylodes22_contig00020144 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00020144
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17224.3| unnamed protein product [Vitis vinifera]              148   5e-34
ref|XP_002328898.1| predicted protein [Populus trichocarpa] gi|2...   148   5e-34
ref|XP_002269672.1| PREDICTED: probable methionyl-tRNA synthetas...   148   5e-34
ref|XP_002298685.1| predicted protein [Populus trichocarpa] gi|2...   146   2e-33
ref|XP_002268996.1| PREDICTED: probable methionyl-tRNA synthetas...   138   5e-31

>emb|CBI17224.3| unnamed protein product [Vitis vinifera]
          Length = 949

 Score =  148 bits (373), Expect = 5e-34
 Identities = 69/88 (78%), Positives = 79/88 (89%), Gaps = 2/88 (2%)
 Frame = -3

Query: 258 QFWKLYKEDLPSCSIVMKTSVGVVYLLACLLEPFMPSFSIEVLKQLSLP--LQFSLSDEK 85
           QFWKLYKED PSCSIV+KTS+G+V+LLACLLEPFMPSFS+EVLKQL++P    F L DEK
Sbjct: 491 QFWKLYKEDQPSCSIVVKTSLGLVHLLACLLEPFMPSFSLEVLKQLNMPPETSFLLCDEK 550

Query: 84  GDVEKVKRPWEIIPAGHRIGTPVPLFKE 1
           GD+E+ KRPWEI+PAGHRIGTP PLFKE
Sbjct: 551 GDIERAKRPWEIVPAGHRIGTPEPLFKE 578


>ref|XP_002328898.1| predicted protein [Populus trichocarpa] gi|222839328|gb|EEE77665.1|
           predicted protein [Populus trichocarpa]
          Length = 801

 Score =  148 bits (373), Expect = 5e-34
 Identities = 69/87 (79%), Positives = 80/87 (91%), Gaps = 1/87 (1%)
 Frame = -3

Query: 258 QFWKLYKEDLPSCSIVMKTSVGVVYLLACLLEPFMPSFSIEVLKQLSLPL-QFSLSDEKG 82
           QFWKLYKED PSCSIV+KTS+G+VYLLACLLEPF+PSFS+EV KQL+LPL Q SL DEKG
Sbjct: 485 QFWKLYKEDQPSCSIVIKTSLGLVYLLACLLEPFIPSFSVEVFKQLNLPLEQASLCDEKG 544

Query: 81  DVEKVKRPWEIIPAGHRIGTPVPLFKE 1
           D+++ KRPWEI+PAGH+IGTP PLFKE
Sbjct: 545 DMDRAKRPWEILPAGHKIGTPEPLFKE 571


>ref|XP_002269672.1| PREDICTED: probable methionyl-tRNA synthetase [Vitis vinifera]
          Length = 807

 Score =  148 bits (373), Expect = 5e-34
 Identities = 69/88 (78%), Positives = 79/88 (89%), Gaps = 2/88 (2%)
 Frame = -3

Query: 258 QFWKLYKEDLPSCSIVMKTSVGVVYLLACLLEPFMPSFSIEVLKQLSLP--LQFSLSDEK 85
           QFWKLYKED PSCSIV+KTS+G+V+LLACLLEPFMPSFS+EVLKQL++P    F L DEK
Sbjct: 491 QFWKLYKEDQPSCSIVVKTSLGLVHLLACLLEPFMPSFSLEVLKQLNMPPETSFLLCDEK 550

Query: 84  GDVEKVKRPWEIIPAGHRIGTPVPLFKE 1
           GD+E+ KRPWEI+PAGHRIGTP PLFKE
Sbjct: 551 GDIERAKRPWEIVPAGHRIGTPEPLFKE 578


>ref|XP_002298685.1| predicted protein [Populus trichocarpa] gi|222845943|gb|EEE83490.1|
           predicted protein [Populus trichocarpa]
          Length = 805

 Score =  146 bits (368), Expect = 2e-33
 Identities = 68/87 (78%), Positives = 79/87 (90%), Gaps = 1/87 (1%)
 Frame = -3

Query: 258 QFWKLYKEDLPSCSIVMKTSVGVVYLLACLLEPFMPSFSIEVLKQLSL-PLQFSLSDEKG 82
           QFW+LYKED PSCSIV+KTS+G+VYLLACLLEPFMPSFS+EV KQL++ P Q SL DEKG
Sbjct: 490 QFWRLYKEDQPSCSIVIKTSLGLVYLLACLLEPFMPSFSVEVFKQLNMPPEQASLCDEKG 549

Query: 81  DVEKVKRPWEIIPAGHRIGTPVPLFKE 1
           D++K KRPWEI+PAGH+IGTP PLFKE
Sbjct: 550 DMDKAKRPWEILPAGHKIGTPEPLFKE 576


>ref|XP_002268996.1| PREDICTED: probable methionyl-tRNA synthetase [Vitis vinifera]
           gi|296081059|emb|CBI18340.3| unnamed protein product
           [Vitis vinifera]
          Length = 804

 Score =  138 bits (347), Expect = 5e-31
 Identities = 63/88 (71%), Positives = 77/88 (87%), Gaps = 2/88 (2%)
 Frame = -3

Query: 258 QFWKLYKEDLPSCSIVMKTSVGVVYLLACLLEPFMPSFSIEVLKQLSLP--LQFSLSDEK 85
           QFWKLYKED  SCSIVM+TSVG+VYLL+CLLEPFMPSFS+EVLKQL+LP   + SL DE 
Sbjct: 487 QFWKLYKEDRASCSIVMRTSVGLVYLLSCLLEPFMPSFSLEVLKQLNLPPETRLSLCDEN 546

Query: 84  GDVEKVKRPWEIIPAGHRIGTPVPLFKE 1
           GD+E+ ++PWE++PAGH++GTP PLF E
Sbjct: 547 GDLERARKPWELLPAGHKMGTPEPLFNE 574


Top