BLASTX nr result

ID: Atractylodes22_contig00020116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00020116
         (778 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273630.1| PREDICTED: RING-H2 finger protein ATL57-like...   149   5e-34
ref|XP_002523741.1| zinc finger protein, putative [Ricinus commu...   124   2e-26
ref|NP_180361.1| RING-H2 finger protein ATL57 [Arabidopsis thali...   117   2e-24
ref|XP_002880959.1| predicted protein [Arabidopsis lyrata subsp....   113   4e-23
ref|XP_003626315.1| RING finger protein [Medicago truncatula] gi...   109   6e-22

>ref|XP_002273630.1| PREDICTED: RING-H2 finger protein ATL57-like [Vitis vinifera]
          Length = 244

 Score =  149 bits (377), Expect = 5e-34
 Identities = 75/138 (54%), Positives = 91/138 (65%), Gaps = 7/138 (5%)
 Frame = +1

Query: 136 NSPFDSSXXXXXXXXXXXXFFMAFFSLYIRRFSNSDD---SLSRRRPNPPHFRTDKRG-- 300
           N+PFDSS            FFM FFS+YIRRF+  +    S  RR PNPP   + +    
Sbjct: 49  NTPFDSSMALTVIVLLTALFFMGFFSVYIRRFAEDNAVEMSRRRRHPNPPASSSSRSPTP 108

Query: 301 --GLDPSAVRSLPLVPYSRRSKIWSECSICLSEFEERETVKLIPYCRHGFHPLCIDTWLS 474
             GLD S V SLPL  Y   +K   +C +CL++FE+++TVK+IPYCRH FHP CIDTWLS
Sbjct: 109 SKGLDASTVSSLPLFSYHGDAKETLDCPVCLTQFEDKDTVKIIPYCRHVFHPPCIDTWLS 168

Query: 475 SHVSCPLCRSTQLFPAVD 528
           SHVSCP+CRSTQLFPA D
Sbjct: 169 SHVSCPVCRSTQLFPAKD 186


>ref|XP_002523741.1| zinc finger protein, putative [Ricinus communis]
           gi|223537045|gb|EEF38681.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 254

 Score =  124 bits (312), Expect = 2e-26
 Identities = 71/161 (44%), Positives = 87/161 (54%), Gaps = 15/161 (9%)
 Frame = +1

Query: 106 VGSPTPSFI-----SNSPFDSSXXXXXXXXXXXXFFMAFFSLYIRRFSNSDDS-LSRRRP 267
           + SP P  +      N PFDSS            FFM FFS+YIRRFS    S  +   P
Sbjct: 28  MSSPPPQSVLKPPYPNPPFDSSMALTVLVLLSALFFMGFFSIYIRRFSTEPASEFTSHHP 87

Query: 268 NPPHFRTDK--------RGGLDPSAVRSLPLVPYSR-RSKIWSECSICLSEFEERETVKL 420
            P      +        R GLDP  ++SLP+  Y    +K   EC++CL EFEE+ETVK 
Sbjct: 88  GPGTPSNQRPSRVVGGSRKGLDPEVIKSLPVYSYYHGEAKYQIECAVCLGEFEEKETVKS 147

Query: 421 IPYCRHGFHPLCIDTWLSSHVSCPLCRSTQLFPAVDEVDGD 543
           IPYC+H FH  CI+TWL  HV+CP+CR TQ F  V   DGD
Sbjct: 148 IPYCKHMFHLECIETWLKLHVTCPVCRGTQ-FLEVKSRDGD 187


>ref|NP_180361.1| RING-H2 finger protein ATL57 [Arabidopsis thaliana]
           gi|68565332|sp|Q9SJJ7.1|ATL57_ARATH RecName:
           Full=RING-H2 finger protein ATL57
           gi|4510422|gb|AAD21508.1| putative RING zinc finger
           protein [Arabidopsis thaliana]
           gi|26452105|dbj|BAC43142.1| putative RING finger protein
           [Arabidopsis thaliana] gi|28950793|gb|AAO63320.1|
           At2g27940 [Arabidopsis thaliana]
           gi|330252968|gb|AEC08062.1| RING-H2 finger protein ATL57
           [Arabidopsis thaliana]
          Length = 237

 Score =  117 bits (294), Expect = 2e-24
 Identities = 71/170 (41%), Positives = 92/170 (54%), Gaps = 18/170 (10%)
 Frame = +1

Query: 73  LLQEVEDASRIVGSPTPSFISNSPFDSSXXXXXXXXXXXXFFMAFFSLYIRRFSNSDDSL 252
           L + V++ +    +PTP     S  DS+            FFM FFS+Y R F++S  S 
Sbjct: 22  LTKTVQNVTSSPLTPTPPPQPPSALDSTMALTIFILLVALFFMGFFSVYFRHFADSSSST 81

Query: 253 ---------SRRRPNPPHFRTDK--------RGGLDPSAVRSLPLVPYSRRSKIWSE-CS 378
                       R +P    T          R GLD  AVRSLP+  Y++ +K  +E C 
Sbjct: 82  VDISSMPRTRSSRMSPRRLSTSVVVSRPYSFRRGLDSQAVRSLPVYRYTKAAKQRNEDCV 141

Query: 379 ICLSEFEERETVKLIPYCRHGFHPLCIDTWLSSHVSCPLCRSTQLFPAVD 528
           ICLS+FEE ETVK+IP+C H FH  C+DTWLSS+V+CPLCRS QLF   D
Sbjct: 142 ICLSDFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCPLCRSNQLFSDKD 191


>ref|XP_002880959.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297326798|gb|EFH57218.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 234

 Score =  113 bits (283), Expect = 4e-23
 Identities = 72/168 (42%), Positives = 91/168 (54%), Gaps = 16/168 (9%)
 Frame = +1

Query: 73  LLQEVEDASRIVGSPTPSFISNSPFDSSXXXXXXXXXXXXFFMAFFSLYIRRFSNSD--- 243
           L+  V++A+ +   P P     S  DSS            FFM FFS+YI  F +     
Sbjct: 24  LVTNVQNATSL---PPPPPEPPSALDSSMALTIFVLLVALFFMGFFSVYIHHFVDDSTVE 80

Query: 244 -DSLSRRRPN---PPHFRTDK--------RGGLDPSAVRSLPLVPYSRRSKIWSE-CSIC 384
             S+ R R +   P    T          R GLD   VRSLP+  Y++ +K  +E C IC
Sbjct: 81  ISSIPRTRSSRMSPRRLSTSVVVSRPYSYRRGLDSQTVRSLPVYHYTKATKQRNEDCVIC 140

Query: 385 LSEFEERETVKLIPYCRHGFHPLCIDTWLSSHVSCPLCRSTQLFPAVD 528
           LSEFEE ETVK+IP+C H FH  C+DTWLSS+V+CPLCRS QLF   D
Sbjct: 141 LSEFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCPLCRSNQLFSDKD 188


>ref|XP_003626315.1| RING finger protein [Medicago truncatula]
           gi|87240525|gb|ABD32383.1| Zinc finger, RING-type
           [Medicago truncatula] gi|355501330|gb|AES82533.1| RING
           finger protein [Medicago truncatula]
          Length = 361

 Score =  109 bits (273), Expect = 6e-22
 Identities = 70/176 (39%), Positives = 92/176 (52%), Gaps = 6/176 (3%)
 Frame = +1

Query: 37  LINMKLLFHRRTLLQEVEDASRIVGSPT-PSFISNSPFDSSXXXXXXXXXXXXFFMAFFS 213
           L  + LL   +T  Q   D      +PT P+F  N  F+ S            F M FFS
Sbjct: 11  LFGILLLSITKTQSQATND------NPTNPNF--NQEFNPSFAIIIVILVAALFLMGFFS 62

Query: 214 LYIRRFSNSDDSLSRRRPNPPHFRTDKRGGLDPSAVRSLPLVPYS-----RRSKIWSECS 378
           +YIRR S+S  S +   P     R   RG LDPS + + P++ YS     +  K   EC+
Sbjct: 63  IYIRRCSDSPSSNNLLLPITNGRRAVARG-LDPSVIETFPILEYSEVKIHKIGKDVLECA 121

Query: 379 ICLSEFEERETVKLIPYCRHGFHPLCIDTWLSSHVSCPLCRSTQLFPAVDEVDGDP 546
           +CL EFE+ ET++LIP C H FHP CID WLSSH +CP+CR+  +    D V G P
Sbjct: 122 VCLMEFEDTETLRLIPKCDHVFHPECIDEWLSSHTTCPVCRANLVPQPGDSVHGVP 177


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