BLASTX nr result
ID: Atractylodes22_contig00020116
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes22_contig00020116 (778 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273630.1| PREDICTED: RING-H2 finger protein ATL57-like... 149 5e-34 ref|XP_002523741.1| zinc finger protein, putative [Ricinus commu... 124 2e-26 ref|NP_180361.1| RING-H2 finger protein ATL57 [Arabidopsis thali... 117 2e-24 ref|XP_002880959.1| predicted protein [Arabidopsis lyrata subsp.... 113 4e-23 ref|XP_003626315.1| RING finger protein [Medicago truncatula] gi... 109 6e-22 >ref|XP_002273630.1| PREDICTED: RING-H2 finger protein ATL57-like [Vitis vinifera] Length = 244 Score = 149 bits (377), Expect = 5e-34 Identities = 75/138 (54%), Positives = 91/138 (65%), Gaps = 7/138 (5%) Frame = +1 Query: 136 NSPFDSSXXXXXXXXXXXXFFMAFFSLYIRRFSNSDD---SLSRRRPNPPHFRTDKRG-- 300 N+PFDSS FFM FFS+YIRRF+ + S RR PNPP + + Sbjct: 49 NTPFDSSMALTVIVLLTALFFMGFFSVYIRRFAEDNAVEMSRRRRHPNPPASSSSRSPTP 108 Query: 301 --GLDPSAVRSLPLVPYSRRSKIWSECSICLSEFEERETVKLIPYCRHGFHPLCIDTWLS 474 GLD S V SLPL Y +K +C +CL++FE+++TVK+IPYCRH FHP CIDTWLS Sbjct: 109 SKGLDASTVSSLPLFSYHGDAKETLDCPVCLTQFEDKDTVKIIPYCRHVFHPPCIDTWLS 168 Query: 475 SHVSCPLCRSTQLFPAVD 528 SHVSCP+CRSTQLFPA D Sbjct: 169 SHVSCPVCRSTQLFPAKD 186 >ref|XP_002523741.1| zinc finger protein, putative [Ricinus communis] gi|223537045|gb|EEF38681.1| zinc finger protein, putative [Ricinus communis] Length = 254 Score = 124 bits (312), Expect = 2e-26 Identities = 71/161 (44%), Positives = 87/161 (54%), Gaps = 15/161 (9%) Frame = +1 Query: 106 VGSPTPSFI-----SNSPFDSSXXXXXXXXXXXXFFMAFFSLYIRRFSNSDDS-LSRRRP 267 + SP P + N PFDSS FFM FFS+YIRRFS S + P Sbjct: 28 MSSPPPQSVLKPPYPNPPFDSSMALTVLVLLSALFFMGFFSIYIRRFSTEPASEFTSHHP 87 Query: 268 NPPHFRTDK--------RGGLDPSAVRSLPLVPYSR-RSKIWSECSICLSEFEERETVKL 420 P + R GLDP ++SLP+ Y +K EC++CL EFEE+ETVK Sbjct: 88 GPGTPSNQRPSRVVGGSRKGLDPEVIKSLPVYSYYHGEAKYQIECAVCLGEFEEKETVKS 147 Query: 421 IPYCRHGFHPLCIDTWLSSHVSCPLCRSTQLFPAVDEVDGD 543 IPYC+H FH CI+TWL HV+CP+CR TQ F V DGD Sbjct: 148 IPYCKHMFHLECIETWLKLHVTCPVCRGTQ-FLEVKSRDGD 187 >ref|NP_180361.1| RING-H2 finger protein ATL57 [Arabidopsis thaliana] gi|68565332|sp|Q9SJJ7.1|ATL57_ARATH RecName: Full=RING-H2 finger protein ATL57 gi|4510422|gb|AAD21508.1| putative RING zinc finger protein [Arabidopsis thaliana] gi|26452105|dbj|BAC43142.1| putative RING finger protein [Arabidopsis thaliana] gi|28950793|gb|AAO63320.1| At2g27940 [Arabidopsis thaliana] gi|330252968|gb|AEC08062.1| RING-H2 finger protein ATL57 [Arabidopsis thaliana] Length = 237 Score = 117 bits (294), Expect = 2e-24 Identities = 71/170 (41%), Positives = 92/170 (54%), Gaps = 18/170 (10%) Frame = +1 Query: 73 LLQEVEDASRIVGSPTPSFISNSPFDSSXXXXXXXXXXXXFFMAFFSLYIRRFSNSDDSL 252 L + V++ + +PTP S DS+ FFM FFS+Y R F++S S Sbjct: 22 LTKTVQNVTSSPLTPTPPPQPPSALDSTMALTIFILLVALFFMGFFSVYFRHFADSSSST 81 Query: 253 ---------SRRRPNPPHFRTDK--------RGGLDPSAVRSLPLVPYSRRSKIWSE-CS 378 R +P T R GLD AVRSLP+ Y++ +K +E C Sbjct: 82 VDISSMPRTRSSRMSPRRLSTSVVVSRPYSFRRGLDSQAVRSLPVYRYTKAAKQRNEDCV 141 Query: 379 ICLSEFEERETVKLIPYCRHGFHPLCIDTWLSSHVSCPLCRSTQLFPAVD 528 ICLS+FEE ETVK+IP+C H FH C+DTWLSS+V+CPLCRS QLF D Sbjct: 142 ICLSDFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCPLCRSNQLFSDKD 191 >ref|XP_002880959.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297326798|gb|EFH57218.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 234 Score = 113 bits (283), Expect = 4e-23 Identities = 72/168 (42%), Positives = 91/168 (54%), Gaps = 16/168 (9%) Frame = +1 Query: 73 LLQEVEDASRIVGSPTPSFISNSPFDSSXXXXXXXXXXXXFFMAFFSLYIRRFSNSD--- 243 L+ V++A+ + P P S DSS FFM FFS+YI F + Sbjct: 24 LVTNVQNATSL---PPPPPEPPSALDSSMALTIFVLLVALFFMGFFSVYIHHFVDDSTVE 80 Query: 244 -DSLSRRRPN---PPHFRTDK--------RGGLDPSAVRSLPLVPYSRRSKIWSE-CSIC 384 S+ R R + P T R GLD VRSLP+ Y++ +K +E C IC Sbjct: 81 ISSIPRTRSSRMSPRRLSTSVVVSRPYSYRRGLDSQTVRSLPVYHYTKATKQRNEDCVIC 140 Query: 385 LSEFEERETVKLIPYCRHGFHPLCIDTWLSSHVSCPLCRSTQLFPAVD 528 LSEFEE ETVK+IP+C H FH C+DTWLSS+V+CPLCRS QLF D Sbjct: 141 LSEFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCPLCRSNQLFSDKD 188 >ref|XP_003626315.1| RING finger protein [Medicago truncatula] gi|87240525|gb|ABD32383.1| Zinc finger, RING-type [Medicago truncatula] gi|355501330|gb|AES82533.1| RING finger protein [Medicago truncatula] Length = 361 Score = 109 bits (273), Expect = 6e-22 Identities = 70/176 (39%), Positives = 92/176 (52%), Gaps = 6/176 (3%) Frame = +1 Query: 37 LINMKLLFHRRTLLQEVEDASRIVGSPT-PSFISNSPFDSSXXXXXXXXXXXXFFMAFFS 213 L + LL +T Q D +PT P+F N F+ S F M FFS Sbjct: 11 LFGILLLSITKTQSQATND------NPTNPNF--NQEFNPSFAIIIVILVAALFLMGFFS 62 Query: 214 LYIRRFSNSDDSLSRRRPNPPHFRTDKRGGLDPSAVRSLPLVPYS-----RRSKIWSECS 378 +YIRR S+S S + P R RG LDPS + + P++ YS + K EC+ Sbjct: 63 IYIRRCSDSPSSNNLLLPITNGRRAVARG-LDPSVIETFPILEYSEVKIHKIGKDVLECA 121 Query: 379 ICLSEFEERETVKLIPYCRHGFHPLCIDTWLSSHVSCPLCRSTQLFPAVDEVDGDP 546 +CL EFE+ ET++LIP C H FHP CID WLSSH +CP+CR+ + D V G P Sbjct: 122 VCLMEFEDTETLRLIPKCDHVFHPECIDEWLSSHTTCPVCRANLVPQPGDSVHGVP 177