BLASTX nr result

ID: Atractylodes22_contig00020097 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00020097
         (213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523201.1| conserved hypothetical protein [Ricinus comm...   149   2e-34
ref|XP_003546247.1| PREDICTED: cleavage and polyadenylation spec...   148   4e-34
ref|XP_003534764.1| PREDICTED: cleavage and polyadenylation spec...   148   4e-34
ref|XP_002317344.1| predicted protein [Populus trichocarpa] gi|2...   148   4e-34
ref|XP_002300333.1| predicted protein [Populus trichocarpa] gi|2...   148   4e-34

>ref|XP_002523201.1| conserved hypothetical protein [Ricinus communis]
           gi|223537608|gb|EEF39232.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 702

 Score =  149 bits (377), Expect = 2e-34
 Identities = 63/70 (90%), Positives = 68/70 (97%)
 Frame = -3

Query: 211 NFSGRRSYRQTVCRHWLRGLCMKGEACGFLHQYDKSRMPICRFFRLYGECREQDCVYKHT 32
           N +GRRS+RQTVCRHWLR LCMKG+ACGFLHQYDKSRMP+CRFFRLYGECREQDCVYKHT
Sbjct: 66  NQAGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHT 125

Query: 31  SEDIKECNMY 2
           +EDIKECNMY
Sbjct: 126 NEDIKECNMY 135


>ref|XP_003546247.1| PREDICTED: cleavage and polyadenylation specificity factor
           CPSF30-like [Glycine max]
          Length = 691

 Score =  148 bits (374), Expect = 4e-34
 Identities = 62/70 (88%), Positives = 67/70 (95%)
 Frame = -3

Query: 211 NFSGRRSYRQTVCRHWLRGLCMKGEACGFLHQYDKSRMPICRFFRLYGECREQDCVYKHT 32
           N  GRRS+RQTVCRHWLR LCMKG+ACGFLHQYDK+RMP+CRFFRLYGECREQDCVYKHT
Sbjct: 63  NVPGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQDCVYKHT 122

Query: 31  SEDIKECNMY 2
           +EDIKECNMY
Sbjct: 123 NEDIKECNMY 132


>ref|XP_003534764.1| PREDICTED: cleavage and polyadenylation specificity factor
           CPSF30-like [Glycine max]
          Length = 681

 Score =  148 bits (374), Expect = 4e-34
 Identities = 62/70 (88%), Positives = 67/70 (95%)
 Frame = -3

Query: 211 NFSGRRSYRQTVCRHWLRGLCMKGEACGFLHQYDKSRMPICRFFRLYGECREQDCVYKHT 32
           N  GRRS+RQTVCRHWLR LCMKG+ACGFLHQYDK+RMP+CRFFRLYGECREQDCVYKHT
Sbjct: 63  NVPGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQDCVYKHT 122

Query: 31  SEDIKECNMY 2
           +EDIKECNMY
Sbjct: 123 NEDIKECNMY 132


>ref|XP_002317344.1| predicted protein [Populus trichocarpa] gi|222860409|gb|EEE97956.1|
           predicted protein [Populus trichocarpa]
          Length = 722

 Score =  148 bits (374), Expect = 4e-34
 Identities = 62/68 (91%), Positives = 67/68 (98%)
 Frame = -3

Query: 205 SGRRSYRQTVCRHWLRGLCMKGEACGFLHQYDKSRMPICRFFRLYGECREQDCVYKHTSE 26
           +GRRS+RQTVCRHWLR LCMKG+ACGFLHQYDKSRMP+CRFFRLYGECREQDCVYKHT+E
Sbjct: 70  AGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNE 129

Query: 25  DIKECNMY 2
           DIKECNMY
Sbjct: 130 DIKECNMY 137


>ref|XP_002300333.1| predicted protein [Populus trichocarpa] gi|222847591|gb|EEE85138.1|
           predicted protein [Populus trichocarpa]
          Length = 669

 Score =  148 bits (374), Expect = 4e-34
 Identities = 62/68 (91%), Positives = 67/68 (98%)
 Frame = -3

Query: 205 SGRRSYRQTVCRHWLRGLCMKGEACGFLHQYDKSRMPICRFFRLYGECREQDCVYKHTSE 26
           +GRRS+RQTVCRHWLR LCMKG+ACGFLHQYDKSRMP+CRFFRLYGECREQDCVYKHT+E
Sbjct: 65  AGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNE 124

Query: 25  DIKECNMY 2
           DIKECNMY
Sbjct: 125 DIKECNMY 132


Top