BLASTX nr result

ID: Atractylodes22_contig00020081 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00020081
         (1569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004167132.1| PREDICTED: LOW QUALITY PROTEIN: ribonuclease...    70   2e-09
ref|XP_004142203.1| PREDICTED: ribonuclease II, chloroplastic/mi...    70   2e-09
ref|XP_002309062.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-09
ref|NP_195845.2| Ribonuclease II/R family protein [Arabidopsis t...    65   6e-09
ref|XP_002870965.1| EMB2730 [Arabidopsis lyrata subsp. lyrata] g...    65   6e-09

>ref|XP_004167132.1| PREDICTED: LOW QUALITY PROTEIN: ribonuclease II,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 809

 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 41/90 (45%), Positives = 50/90 (55%)
 Frame = -1

Query: 720 DGRIKVWLHVDPASFVPASFVQPGSMIDRYIRLILYNIYLQLQCLLRFLDMVTLQRSNAK 541
           DGRIK+W+HV      PA FVQPGS++DR                        ++R  + 
Sbjct: 435 DGRIKIWIHVAD----PARFVQPGSIVDRE----------------------AMKRGTS- 467

Query: 540 WKIYFLPTETYPMFPEKLDMEGMSLKQGQI 451
               FLPT TYPMFPEKL M+GMSLKQG+I
Sbjct: 468 ---IFLPTATYPMFPEKLAMDGMSLKQGEI 494


>ref|XP_004142203.1| PREDICTED: ribonuclease II, chloroplastic/mitochondrial-like
           [Cucumis sativus]
          Length = 809

 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 41/90 (45%), Positives = 50/90 (55%)
 Frame = -1

Query: 720 DGRIKVWLHVDPASFVPASFVQPGSMIDRYIRLILYNIYLQLQCLLRFLDMVTLQRSNAK 541
           DGRIK+W+HV      PA FVQPGS++DR                        ++R  + 
Sbjct: 435 DGRIKIWIHVAD----PARFVQPGSIVDRE----------------------AMKRGTS- 467

Query: 540 WKIYFLPTETYPMFPEKLDMEGMSLKQGQI 451
               FLPT TYPMFPEKL M+GMSLKQG+I
Sbjct: 468 ---IFLPTATYPMFPEKLAMDGMSLKQGEI 494


>ref|XP_002309062.1| predicted protein [Populus trichocarpa] gi|222855038|gb|EEE92585.1|
           predicted protein [Populus trichocarpa]
          Length = 792

 Score = 68.9 bits (167), Expect = 3e-09
 Identities = 41/90 (45%), Positives = 49/90 (54%)
 Frame = -1

Query: 720 DGRIKVWLHVDPASFVPASFVQPGSMIDRYIRLILYNIYLQLQCLLRFLDMVTLQRSNAK 541
           DGRIKVW+HV      PA +VQPGS +DR                        ++R  + 
Sbjct: 418 DGRIKVWIHVAD----PARYVQPGSKVDRE----------------------AMRRGTS- 450

Query: 540 WKIYFLPTETYPMFPEKLDMEGMSLKQGQI 451
               FLPT TYPMFPEKL MEGMSLKQG++
Sbjct: 451 ---VFLPTATYPMFPEKLAMEGMSLKQGEV 477


>ref|NP_195845.2| Ribonuclease II/R family protein [Arabidopsis thaliana]
           gi|75127176|sp|Q6NQJ6.1|RNR1_ARATH RecName:
           Full=Ribonuclease II, chloroplastic/mitochondrial;
           Short=AtmtRNaseII; Short=RNase II; AltName: Full=Protein
           EMBRYO DEFECTIVE 2730; AltName: Full=Ribonucleotide
           reductase 1; Flags: Precursor gi|34222082|gb|AAQ62877.1|
           At5g02250 [Arabidopsis thaliana]
           gi|51970908|dbj|BAD44146.1| ribonuclease II-like protein
           [Arabidopsis thaliana] gi|332003067|gb|AED90450.1|
           Ribonuclease II/R family protein [Arabidopsis thaliana]
          Length = 803

 Score = 64.7 bits (156), Expect(2) = 6e-09
 Identities = 38/89 (42%), Positives = 45/89 (50%)
 Frame = -1

Query: 720 DGRIKVWLHVDPASFVPASFVQPGSMIDRYIRLILYNIYLQLQCLLRFLDMVTLQRSNAK 541
           DGRIK+W+HV      PA +V PGS +DR  R                           +
Sbjct: 429 DGRIKIWIHVAD----PARYVTPGSKVDREAR--------------------------RR 458

Query: 540 WKIYFLPTETYPMFPEKLDMEGMSLKQGQ 454
               FLPT TYPMFPEKL MEGMSL+QG+
Sbjct: 459 GTSVFLPTATYPMFPEKLAMEGMSLRQGE 487



 Score = 23.5 bits (49), Expect(2) = 6e-09
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 478 GNELEAGTNCKTITILVVLHYNG 410
           G  L  G NC  +++ VVL  +G
Sbjct: 480 GMSLRQGENCNAVSVSVVLRSDG 502


>ref|XP_002870965.1| EMB2730 [Arabidopsis lyrata subsp. lyrata]
           gi|297316802|gb|EFH47224.1| EMB2730 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 803

 Score = 64.7 bits (156), Expect(2) = 6e-09
 Identities = 38/89 (42%), Positives = 45/89 (50%)
 Frame = -1

Query: 720 DGRIKVWLHVDPASFVPASFVQPGSMIDRYIRLILYNIYLQLQCLLRFLDMVTLQRSNAK 541
           DGRIK+W+HV      PA +V PGS +DR  R                           +
Sbjct: 429 DGRIKIWIHVAD----PARYVTPGSKVDREAR--------------------------RR 458

Query: 540 WKIYFLPTETYPMFPEKLDMEGMSLKQGQ 454
               FLPT TYPMFPEKL MEGMSL+QG+
Sbjct: 459 GTSVFLPTATYPMFPEKLAMEGMSLRQGE 487



 Score = 23.5 bits (49), Expect(2) = 6e-09
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 478 GNELEAGTNCKTITILVVLHYNG 410
           G  L  G NC  +++ VVL  +G
Sbjct: 480 GMSLRQGENCNAVSVSVVLRSDG 502


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