BLASTX nr result

ID: Atractylodes22_contig00020079 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00020079
         (765 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA11767.1| high mobility group protein [Canavalia gladiata]...   100   3e-19
dbj|BAA11766.1| high mobility group protein [Canavalia gladiata]...    99   1e-18
emb|CAA61747.1| HMGI/Y [Pisum sativum] gi|1435175|emb|CAA67752.1...    90   5e-16
ref|XP_002305213.1| high mobility group family [Populus trichoca...    89   1e-15
ref|XP_002302948.1| high mobility group family [Populus trichoca...    89   1e-15

>dbj|BAA11767.1| high mobility group protein [Canavalia gladiata]
           gi|1483175|dbj|BAA13134.1| high mobility group protein
           [Canavalia gladiata]
          Length = 178

 Score =  100 bits (250), Expect = 3e-19
 Identities = 67/178 (37%), Positives = 85/178 (47%), Gaps = 19/178 (10%)
 Frame = -3

Query: 706 MASEEVSR---LPAYTEMIFAAIDALXXXXXXXXXXXXXXXXSTCAYLPDEHANILTDFL 536
           MA+EEV++   LP YTEMI  A+D+L                STC  LPD H+ +L   L
Sbjct: 1   MATEEVNKPPSLPPYTEMITKALDSLNEPNGSNKSAISKYIESTCGELPDGHSTLLAHHL 60

Query: 535 NKLVDKGELVLLNNNYMRPDPISPLKRGRGRPPKAKDP-----AVLESRSQG-------- 395
           NK+ + GELV L NNYM+PDP SP KRGRGRPPK K P      +   R +G        
Sbjct: 61  NKMKESGELVFLKNNYMKPDPTSPPKRGRGRPPKPKVPLPPGTVLSPPRPRGRPPKDPNA 120

Query: 394 ---EAGSEIKRGRGRXXXXXXXXXXXXXXXXXXXXXXXXKTGRPRGRPRKVQPEFAGV 230
                 +++  G GR                         +GRPRGRP KV+P+   V
Sbjct: 121 PTKSPKAKVSTGSGR----PRGRPKKIARSAAVVAPTPGPSGRPRGRPPKVKPQLTEV 174


>dbj|BAA11766.1| high mobility group protein [Canavalia gladiata]
           gi|1483173|dbj|BAA13133.1| high mobility group protein
           [Canavalia gladiata]
          Length = 178

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 73/185 (39%), Positives = 89/185 (48%), Gaps = 4/185 (2%)
 Frame = -3

Query: 706 MASEEVSR---LPAYTEMIFAAIDALXXXXXXXXXXXXXXXXSTCAYLPDEHANILTDFL 536
           MA+EEV++   LP Y EM+  A+DAL                ST   LPD HA +L   L
Sbjct: 1   MATEEVNKPPSLPPYPEMVMKALDALNEPSGSNKSAISKYIESTYGELPDGHATLLAHHL 60

Query: 535 NKLVDKGELVLLNNNYMRPDPISPLKRGRGRPPKAKDPAVLESRSQGEAGSEIKRGRGRX 356
           NK+ D GELV L NNYM+PDP +P KRGRGRPPK K P        G   S   R RGR 
Sbjct: 61  NKMKDSGELVFLKNNYMKPDPNAPPKRGRGRPPKPKVPL-----PPGTVLSP-PRPRGR- 113

Query: 355 XXXXXXXXXXXXXXXXXXXXXXXKTGRPRGRPRKVQPEFAGVEAN*VLS*R-KGRGPFSR 179
                                   +GRPRGRP+K+    A V    V S R +GR P  +
Sbjct: 114 -----PPKDPNAPPKSPKTKVSTGSGRPRGRPKKIARSPAAVAPTPVPSGRPRGRPPKVK 168

Query: 178 AEIPE 164
            ++ E
Sbjct: 169 PQLTE 173


>emb|CAA61747.1| HMGI/Y [Pisum sativum] gi|1435175|emb|CAA67752.1| HMG-I/Y [Pisum
           sativum]
          Length = 197

 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 58/155 (37%), Positives = 76/155 (49%), Gaps = 3/155 (1%)
 Frame = -3

Query: 706 MASEEVSR---LPAYTEMIFAAIDALXXXXXXXXXXXXXXXXSTCAYLPDEHANILTDFL 536
           MA+ EV++   LP Y E+I  AID+L                S    LP+ H+ +L   L
Sbjct: 1   MATREVNKPLSLPPYPELILKAIDSLNEPNGSNKSAISNYIESVYGELPEGHSVVLLYHL 60

Query: 535 NKLVDKGELVLLNNNYMRPDPISPLKRGRGRPPKAKDPAVLESRSQGEAGSEIKRGRGRX 356
           N++ + G+LV   NNY+RPDP +P KRGRGRPPKAKDP  L S   G   +   RGR   
Sbjct: 61  NQMKESGDLVFAKNNYLRPDPNAPPKRGRGRPPKAKDP--LASPPSGAVSTPRPRGR--- 115

Query: 355 XXXXXXXXXXXXXXXXXXXXXXXKTGRPRGRPRKV 251
                                   +GRPRGRP+K+
Sbjct: 116 --------PPKDPNAPPKTPKASGSGRPRGRPKKI 142


>ref|XP_002305213.1| high mobility group family [Populus trichocarpa]
           gi|222848177|gb|EEE85724.1| high mobility group family
           [Populus trichocarpa]
          Length = 189

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 60/162 (37%), Positives = 76/162 (46%), Gaps = 3/162 (1%)
 Frame = -3

Query: 706 MASEEVSR---LPAYTEMIFAAIDALXXXXXXXXXXXXXXXXSTCAYLPDEHANILTDFL 536
           MA+EE+S+   LP Y EMI++AI AL                S    LP  H  +L   L
Sbjct: 1   MAAEEISKPPSLPPYPEMIWSAIAALNETGGSNKTSISKYIESKHGNLPAGHTALLAHHL 60

Query: 535 NKLVDKGELVLLNNNYMRPDPISPLKRGRGRPPKAKDPAVLESRSQGEAGSEIKRGRGRX 356
           N++ D GEL+ L NNYM+PDP +P +RGRGRPPK KDP          A     R RGR 
Sbjct: 61  NRMTDTGELMFLKNNYMKPDPNAPPRRGRGRPPKPKDPLA------PPADLAPARPRGR- 113

Query: 355 XXXXXXXXXXXXXXXXXXXXXXXKTGRPRGRPRKVQPEFAGV 230
                                   +G+PRGRPRK+     G+
Sbjct: 114 ----PPKDPNAPPKPVKPKATTAGSGKPRGRPRKMARPTGGI 151


>ref|XP_002302948.1| high mobility group family [Populus trichocarpa]
           gi|222844674|gb|EEE82221.1| high mobility group family
           [Populus trichocarpa]
          Length = 190

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 58/162 (35%), Positives = 78/162 (48%), Gaps = 3/162 (1%)
 Frame = -3

Query: 706 MASEEVSR---LPAYTEMIFAAIDALXXXXXXXXXXXXXXXXSTCAYLPDEHANILTDFL 536
           MA+EE+++   LP Y EMI +AI+AL                S    LP  H  +L+  L
Sbjct: 1   MAAEEINKPPSLPPYPEMILSAIEALNEANGCNKTSISKYIESKYGDLPAGHTALLSHHL 60

Query: 535 NKLVDKGELVLLNNNYMRPDPISPLKRGRGRPPKAKDPAVLESRSQGEAGSEIKRGRGRX 356
           N++ D GELV   NNYM+PDP +P +RGRGRPPK KDP           GS++   R R 
Sbjct: 61  NRMKDTGELVFWKNNYMKPDPNAPPRRGRGRPPKPKDPL--------SPGSDLPPARPR- 111

Query: 355 XXXXXXXXXXXXXXXXXXXXXXXKTGRPRGRPRKVQPEFAGV 230
                                  ++G+PRGRPRK+     G+
Sbjct: 112 --GRPPKDPNAPPKPVKPKAATGRSGKPRGRPRKMARPTGGI 151


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