BLASTX nr result

ID: Atractylodes22_contig00020063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00020063
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524258.1| Rop guanine nucleotide exchange factor, puta...    75   6e-19
ref|XP_002312130.1| predicted protein [Populus trichocarpa] gi|2...    74   6e-19
ref|XP_002315189.1| predicted protein [Populus trichocarpa] gi|2...    75   1e-18
ref|XP_002277071.2| PREDICTED: rop guanine nucleotide exchange f...    74   6e-18
emb|CBI31584.3| unnamed protein product [Vitis vinifera]               73   1e-17

>ref|XP_002524258.1| Rop guanine nucleotide exchange factor, putative [Ricinus communis]
           gi|223536535|gb|EEF38182.1| Rop guanine nucleotide
           exchange factor, putative [Ricinus communis]
          Length = 590

 Score = 75.5 bits (184), Expect(2) = 6e-19
 Identities = 38/70 (54%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
 Frame = +2

Query: 119 QTGFGTPKFSPGPLVSPARGDRTPFL-----TGNDNSNKPPSRGCGVRRALTNYLGGETR 283
           +T F TP FSP PL+SPARG+RTPFL        +NSNKP  RG GV+R LTNYLG +++
Sbjct: 489 RTTFSTPSFSPAPLISPARGERTPFLPNAATAATNNSNKPHRRGFGVKRVLTNYLGVDSK 548

Query: 284 VRSSCHLLEG 313
            R   +  EG
Sbjct: 549 PRICGNSTEG 558



 Score = 43.9 bits (102), Expect(2) = 6e-19
 Identities = 26/53 (49%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
 Frame = +3

Query: 3   RIDDLLYVDDLSKQSDN-RSSRVSTSTQKRV----SMATSGSPYKLDLALQSF 146
           RIDDLLYVDDL+K SD  + S VS    K+V    S+  SG+PY+   +  SF
Sbjct: 445 RIDDLLYVDDLTKHSDKLQVSTVSVIAHKKVTIPYSVPVSGTPYRTTFSTPSF 497


>ref|XP_002312130.1| predicted protein [Populus trichocarpa] gi|222851950|gb|EEE89497.1|
           predicted protein [Populus trichocarpa]
          Length = 466

 Score = 73.9 bits (180), Expect(2) = 6e-19
 Identities = 35/59 (59%), Positives = 44/59 (74%), Gaps = 4/59 (6%)
 Frame = +2

Query: 119 QTGFGTPKFSPGPLVSPARGDRTPFL----TGNDNSNKPPSRGCGVRRALTNYLGGETR 283
           +T F TP FSP PL+SPARG+RTPFL    +   N+NKPP RG GV+RALTNYL  +++
Sbjct: 402 KTTFSTPSFSPVPLISPARGERTPFLHSTTSSKSNNNKPPRRGFGVKRALTNYLAVDSK 460



 Score = 45.4 bits (106), Expect(2) = 6e-19
 Identities = 26/54 (48%), Positives = 36/54 (66%), Gaps = 6/54 (11%)
 Frame = +3

Query: 3   RIDDLLYVDDLSKQSDNRS--SRVSTSTQKRV----SMATSGSPYKLDLALQSF 146
           RIDDL+YVDDL+K+SDN S  S V+  + ++V    S+  SG+PYK   +  SF
Sbjct: 357 RIDDLVYVDDLTKRSDNLSSVSTVAVISHRKVSNPFSVPVSGTPYKTTFSTPSF 410


>ref|XP_002315189.1| predicted protein [Populus trichocarpa] gi|222864229|gb|EEF01360.1|
           predicted protein [Populus trichocarpa]
          Length = 394

 Score = 75.5 bits (184), Expect(2) = 1e-18
 Identities = 44/96 (45%), Positives = 58/96 (60%), Gaps = 6/96 (6%)
 Frame = +2

Query: 119 QTGFGTPKFSPGPLVSPARGDRTPFL----TGNDNSNKPPSRGCGVRRALTNYLGGETRV 286
           +T F TP FSP PL+SP RG+RTPFL    T N+++NKP  RG GV+R LTNYLG ++R 
Sbjct: 288 KTTFSTPSFSPMPLISPVRGERTPFLHNITTSNNDNNKPHHRGFGVKRVLTNYLGVDSRP 347

Query: 287 RSSCHLLEG--PGCLSTRNADMPASRGSLDCPPTQK 388
           +   +  EG  P   +    D+   + S    PTQK
Sbjct: 348 KICGNTNEGSCPNPKTNLREDLGPEKDS----PTQK 379



 Score = 43.1 bits (100), Expect(2) = 1e-18
 Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 6/54 (11%)
 Frame = +3

Query: 3   RIDDLLYVDDLSKQSDNRSS--RVSTSTQKRV----SMATSGSPYKLDLALQSF 146
           RIDDLLYVDDL+K SD  SS   VS  + K+V    S+  SG+ YK   +  SF
Sbjct: 243 RIDDLLYVDDLTKHSDKLSSVPTVSVISHKKVSIPYSVPVSGTSYKTTFSTPSF 296


>ref|XP_002277071.2| PREDICTED: rop guanine nucleotide exchange factor 1 [Vitis
           vinifera]
          Length = 571

 Score = 73.6 bits (179), Expect(2) = 6e-18
 Identities = 44/94 (46%), Positives = 56/94 (59%)
 Frame = +2

Query: 119 QTGFGTPKFSPGPLVSPARGDRTPFLTGNDNSNKPPSRGCGVRRALTNYLGGETRVRSSC 298
           +T   T   SP PL+SPARG+RTPFL      NKPP RG GV+R L NYLG ET+ ++S 
Sbjct: 475 KTALTTLSRSPAPLISPARGERTPFL-----HNKPPRRGFGVKRVLNNYLGVETKTKNSG 529

Query: 299 HLLEGPGCLSTRNADMPASRGSLDCPPTQKENRT 400
           +  EG G  ST   + PA+R        +KE+ T
Sbjct: 530 NPTEG-GLTSTIVVEAPATRTETKNMQHKKESVT 562



 Score = 42.4 bits (98), Expect(2) = 6e-18
 Identities = 28/53 (52%), Positives = 31/53 (58%), Gaps = 6/53 (11%)
 Frame = +3

Query: 3   RIDDLLYVDDLSKQSDNRSS--RVSTSTQKRV----SMATSGSPYKLDLALQS 143
           RIDDLLYVDDL+KQSD  SS   VS    KRV    S+  S +P K  L   S
Sbjct: 430 RIDDLLYVDDLNKQSDKHSSVPTVSVIAHKRVSIPYSVPVSSTPQKTALTTLS 482


>emb|CBI31584.3| unnamed protein product [Vitis vinifera]
          Length = 814

 Score = 72.8 bits (177), Expect(2) = 1e-17
 Identities = 41/80 (51%), Positives = 51/80 (63%)
 Frame = +2

Query: 119 QTGFGTPKFSPGPLVSPARGDRTPFLTGNDNSNKPPSRGCGVRRALTNYLGGETRVRSSC 298
           +T   T   SP PL+SPARG+RTPFL      NKPP RG GV+R L NYLG ET+ ++S 
Sbjct: 500 KTALTTLSRSPAPLISPARGERTPFL-----HNKPPRRGFGVKRVLNNYLGVETKTKNSG 554

Query: 299 HLLEGPGCLSTRNADMPASR 358
           +  EG G  ST   + PA+R
Sbjct: 555 NPTEG-GLTSTIVVEAPATR 573



 Score = 42.4 bits (98), Expect(2) = 1e-17
 Identities = 28/53 (52%), Positives = 31/53 (58%), Gaps = 6/53 (11%)
 Frame = +3

Query: 3   RIDDLLYVDDLSKQSDNRSS--RVSTSTQKRV----SMATSGSPYKLDLALQS 143
           RIDDLLYVDDL+KQSD  SS   VS    KRV    S+  S +P K  L   S
Sbjct: 455 RIDDLLYVDDLNKQSDKHSSVPTVSVIAHKRVSIPYSVPVSSTPQKTALTTLS 507


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