BLASTX nr result

ID: Atractylodes22_contig00020058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00020058
         (993 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83934.1| hypothetical protein VITISV_035768 [Vitis vinifera]   306   7e-81
ref|XP_002525278.1| GTP binding protein, putative [Ricinus commu...   297   2e-78
ref|XP_003550974.1| PREDICTED: pentatricopeptide repeat-containi...   286   4e-75
ref|XP_003608531.1| Pentatricopeptide repeat-containing protein ...   286   4e-75
ref|XP_004141982.1| PREDICTED: pentatricopeptide repeat-containi...   275   1e-71

>emb|CAN83934.1| hypothetical protein VITISV_035768 [Vitis vinifera]
          Length = 615

 Score =  306 bits (783), Expect = 7e-81
 Identities = 152/258 (58%), Positives = 196/258 (75%), Gaps = 1/258 (0%)
 Frame = -1

Query: 993 WQEAILEIKKMKRLRLTRPLVVTFTGLILSSLDGGHIGNCIRIFNVSKEHCAPDIGIINA 814
           WQ+AI+E++K+K+   ++PL VTFTG+I SS+DGGH+ +C+ IF   K HC+P+IG INA
Sbjct: 58  WQDAIVEVEKLKKRPHSKPLEVTFTGMITSSMDGGHLDDCLSIFEHMKYHCSPNIGTINA 117

Query: 813 MLKVYGRNDMFFEAKELFEDTKRSNGHNISLGRDGPF-VSPDAYTYGEMLRVSASAHQWE 637
           MLKVYGRNDMF +AKELFE+TKRS   + +   DG   + PD YTY  ML  SASAHQWE
Sbjct: 118 MLKVYGRNDMFSKAKELFEETKRSTFASNTCMDDGSISLVPDLYTYSSMLEASASAHQWE 177

Query: 636 YFDYVYKEMVFSGYQLDQNKHAFLLVEASRAGKTHLLEHAFDVMLEAGEIPPSSFFVEII 457
           +F+YVYKEM  SGYQLDQ+KHA LL +ASRAGK HLLEHAFD +LEAGEIP  S F E+I
Sbjct: 178 FFEYVYKEMTLSGYQLDQSKHALLLGKASRAGKWHLLEHAFDTILEAGEIPHPSIFTEMI 237

Query: 456 CRAMIQDDFDRALTILNSMAHAPFLVREKEWRGLFEEYKGKITRSHLQKLLDKIGTHDIA 277
           C+A  Q +++RA+T++N+MAHAPF+V EK+W  LF     +I+R +L+KLLD +   D+A
Sbjct: 238 CQATAQHNYERAVTLINAMAHAPFVVSEKQWTDLFVT-DDRISRVNLEKLLDSLHNCDVA 296

Query: 276 MEASAYKLSRLLLSLCGS 223
            EA+   L + L SLCGS
Sbjct: 297 EEATVSNLYKSLQSLCGS 314


>ref|XP_002525278.1| GTP binding protein, putative [Ricinus communis]
            gi|223535436|gb|EEF37106.1| GTP binding protein, putative
            [Ricinus communis]
          Length = 1010

 Score =  297 bits (761), Expect = 2e-78
 Identities = 154/301 (51%), Positives = 199/301 (66%)
 Frame = -1

Query: 993  WQEAILEIKKMKRLRLTRPLVVTFTGLILSSLDGGHIGNCIRIFNVSKEHCAPDIGIINA 814
            WQ+A+LE+KKMK LR ++PL VTFTGLI+SSLDGGH+ +CI IF   K +C P+IG IN 
Sbjct: 592  WQDAMLEVKKMKNLRHSKPLEVTFTGLIMSSLDGGHVSDCISIFEYMKAYCVPNIGTINI 651

Query: 813  MLKVYGRNDMFFEAKELFEDTKRSNGHNISLGRDGPFVSPDAYTYGEMLRVSASAHQWEY 634
            MLKVYGRND+F +AKELF + K +N        DG ++ PD +TY  ML  SASA QWEY
Sbjct: 652  MLKVYGRNDLFSKAKELFGEIKGTNN-------DGTYLVPDEFTYSSMLEASASALQWEY 704

Query: 633  FDYVYKEMVFSGYQLDQNKHAFLLVEASRAGKTHLLEHAFDVMLEAGEIPPSSFFVEIIC 454
            F+ VYKEM F GYQLDQ KHA LLVEASR GK HLLEHAFD  LEAGEIP    F E++ 
Sbjct: 705  FELVYKEMTFCGYQLDQKKHASLLVEASRVGKYHLLEHAFDAALEAGEIPHHLLFTEMVF 764

Query: 453  RAMIQDDFDRALTILNSMAHAPFLVREKEWRGLFEEYKGKITRSHLQKLLDKIGTHDIAM 274
            +A  Q +++RA+ ++N++A APF + EK+W  LF++   KIT+  L+KLLD + + D+A 
Sbjct: 765  QATAQQNYERAVVLVNTLALAPFKISEKQWIDLFQKNGDKITQDGLEKLLDALRSSDVAS 824

Query: 273  EASAYKLSRLLLSLCGSKSRNLYQTSPAHESDLESSSVEGLKLHNVMERFADELTPDESV 94
            E +   LSR L SLCG         S +   D+ +SS        +M     E+  D  +
Sbjct: 825  EPTVANLSRTLHSLCGRGRSEYLSGSTSLGIDVTNSSYLDSGSRKIMGDKGPEMHEDTLI 884

Query: 93   D 91
            D
Sbjct: 885  D 885


>ref|XP_003550974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
            chloroplastic-like [Glycine max]
          Length = 865

 Score =  286 bits (733), Expect = 4e-75
 Identities = 145/283 (51%), Positives = 195/283 (68%), Gaps = 2/283 (0%)
 Frame = -1

Query: 993  WQEAILEIKKMKRLRLTRPLVVTFTGLILSSLDGGHIGNCIRIFNVSKEHCAPDIGIINA 814
            WQ+AILE+  ++ L   +PL VTFTG+I SS+DGGHI +CI IF   KEHC P+IG IN 
Sbjct: 445  WQDAILEVDNIRSLPHAKPLEVTFTGMIKSSMDGGHINDCICIFEYMKEHCVPNIGAINT 504

Query: 813  MLKVYGRNDMFFEAKELFEDTKRSNGHNISLGRDG-PFVSPDAYTYGEMLRVSASAHQWE 637
            MLKVYG+NDMF +AK LFE+ K +     +    G   V PD Y+Y  ML  SA+A QWE
Sbjct: 505  MLKVYGQNDMFSKAKVLFEEVKVAKSEFYATPEGGYSSVVPDVYSYNSMLEASATAQQWE 564

Query: 636  YFDYVYKEMVFSGYQLDQNKHAFLLVEASRAGKTHLLEHAFDVMLEAGEIPPSSFFVEII 457
            YF++VY+EM+ SGYQLDQ+KH  LLV+ASRAGK HLLEHAFD++LEAGEIP   FF E++
Sbjct: 565  YFEHVYREMIVSGYQLDQDKHLSLLVKASRAGKLHLLEHAFDMILEAGEIPHHLFFFELV 624

Query: 456  CRAMIQDDFDRALTILNSMAHAPFLVREKEWRGLFEEYKGKITRSHLQKLLDKIGTHDIA 277
             +A+ Q +++RA+ ++N+MA+APF V EK+W  LF+E + +I+  +L++LLD +G  DI 
Sbjct: 625  IQAIAQHNYERAVILINTMAYAPFRVTEKQWTNLFKESEDRISLENLERLLDALGNCDIV 684

Query: 276  MEASAYKLSRLLLSLCG-SKSRNLYQTSPAHESDLESSSVEGL 151
             E +   L+R L  LCG   SRN     P    +  +   EG+
Sbjct: 685  SELTVSNLTRSLHVLCGLGTSRNFSSIIPFGSENSVNGLNEGI 727


>ref|XP_003608531.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355509586|gb|AES90728.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 877

 Score =  286 bits (733), Expect = 4e-75
 Identities = 141/275 (51%), Positives = 192/275 (69%), Gaps = 1/275 (0%)
 Frame = -1

Query: 993  WQEAILEIKKMKRLRLTRPLVVTFTGLILSSLDGGHIGNCIRIFNVSKEHCAPDIGIINA 814
            WQ+A LE++K+KRL   +PL VTFTG+I SS+DGGHI +CI IF   ++HCAP++G +N 
Sbjct: 467  WQDATLEVEKIKRLPHAKPLEVTFTGMIRSSMDGGHIDDCICIFEYMQDHCAPNVGTVNT 526

Query: 813  MLKVYGRNDMFFEAKELFEDTKRSNGHNISLGRDGPFVSPDAYTYGEMLRVSASAHQWEY 634
            MLKVY +NDMF  AK LFE+ K +             + PDAYTY  ML  S+  HQWEY
Sbjct: 527  MLKVYSQNDMFSTAKVLFEEVKVAKSD----------LRPDAYTYNLMLEASSRGHQWEY 576

Query: 633  FDYVYKEMVFSGYQLDQNKHAFLLVEASRAGKTHLLEHAFDVMLEAGEIPPSSFFVEIIC 454
            F++VYKEM+ SGY LDQNKH  LLV+ASRAGK HLLEHAFD++LEAGEIP   FF E++ 
Sbjct: 577  FEHVYKEMILSGYHLDQNKHLPLLVKASRAGKLHLLEHAFDMVLEAGEIPHHLFFFELVI 636

Query: 453  RAMIQDDFDRALTILNSMAHAPFLVREKEWRGLFEEYKGKITRSHLQKLLDKIGTHDIAM 274
            +A+ Q +++RA+ +L++MAHAP+ V EK+W  LF+E + +I   +L++LLD +G  ++  
Sbjct: 637  QAIAQHNYERAIILLSTMAHAPYRVTEKQWTELFKENEDRINHENLKRLLDDLGNCNVVS 696

Query: 273  EASAYKLSRLLLSLCG-SKSRNLYQTSPAHESDLE 172
            EA+   LSR L  LCG   SRN+    P    +++
Sbjct: 697  EATISNLSRSLHDLCGLGSSRNISSIIPFRSENVD 731


>ref|XP_004141982.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
            chloroplastic-like [Cucumis sativus]
            gi|449499902|ref|XP_004160949.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g67570,
            chloroplastic-like [Cucumis sativus]
          Length = 860

 Score =  275 bits (703), Expect = 1e-71
 Identities = 148/309 (47%), Positives = 206/309 (66%), Gaps = 10/309 (3%)
 Frame = -1

Query: 993  WQEAILEIKKMKRLRLTRPLVVTFTGLILSSLDGGHIGNCIRIFNVSKEHCAPDIGIINA 814
            WQ+A++E++KMK L   +PLVVTFTG+I SS +GGHI +CI IF   K+ CAP+IG IN 
Sbjct: 464  WQDALVEVEKMKTLSHMKPLVVTFTGMISSSFNGGHIDDCISIFEYMKQICAPNIGTINT 523

Query: 813  MLKVYGRNDMFFEAKELFEDTKR---SNGHNISLGRDGPFVSPDAYTYGEMLRVSASAHQ 643
            MLKVYGRNDM+ +AK+LFE+ KR   S+ H+ ++    P + PD YTY  ML  +AS+ Q
Sbjct: 524  MLKVYGRNDMYSKAKDLFEEIKRKADSSSHDSAV----PSLVPDEYTYASMLEAAASSLQ 579

Query: 642  WEYFDYVYKEMVFSGYQLDQNKHAFLLVEASRAGKTHLLEHAFDVMLEAGEIPPSSFFVE 463
            WEYF+ VY+EM  SGYQLDQ+KHA LLVEAS+AGK +LL+HAFD +LEAG+IP    F E
Sbjct: 580  WEYFESVYREMALSGYQLDQSKHALLLVEASKAGKWYLLDHAFDTILEAGQIPHPLLFTE 639

Query: 462  IICRAMIQDDFDRALTILNSMAHAPFLVREKEWRGLFEEYKGKITRSHLQKLLDKIGTHD 283
            +I +   QD++++A+T++ +M +APF V E++W  LFE    +I R++L++LL  +G  D
Sbjct: 640  MILQLTTQDNYEQAVTLVRTMGYAPFQVSERQWTELFEGNTDRIRRNNLKQLLHALGDCD 699

Query: 282  IAMEASAYKLSRLLLSLCGSKSRNLYQTSPAHESDL-------ESSSVEGLKLHNVMERF 124
             A EA+   LSR L SLC          S A + D        +S ++E +KLH   +  
Sbjct: 700  -ASEATVSNLSRSLQSLCKFDIPENTSQSVACDHDATDELQLPDSENMENMKLHPDEDES 758

Query: 123  ADELTPDES 97
             D +  D +
Sbjct: 759  LDIIPVDHA 767


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