BLASTX nr result

ID: Atractylodes22_contig00020013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00020013
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509918.1| DNA binding protein, putative [Ricinus commu...    68   9e-10
ref|XP_002299493.1| AP2/ERF domain-containing transcription fact...    55   6e-06
ref|XP_004149766.1| PREDICTED: ethylene-responsive transcription...    55   8e-06

>ref|XP_002509918.1| DNA binding protein, putative [Ricinus communis]
           gi|223549817|gb|EEF51305.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 313

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 51/149 (34%), Positives = 64/149 (42%), Gaps = 4/149 (2%)
 Frame = +1

Query: 25  TKPSSLSSGYNSGNESHNNSITNKTTSPKSVLRFPSSSMDKSAAESTHHSPSNDGANEAS 204
           T P+ LS   NSG ES N        SP SVLRFPSS+     AES     S+   NE  
Sbjct: 171 TPPAKLSEPSNSGEESQN------VCSPISVLRFPSSTSSNEEAESQGAVFSSKENNEIR 224

Query: 205 ELTALPDTFSDFWPXXXXXXXXXXXXXAKLDPCIFDPTMFQE---SDPL-DMFFVSSKDF 372
           ++        +F                 +     +  M Q+   SD L DMF  +S DF
Sbjct: 225 DMKEESSVSENFSECSSMFPNYFFDFQTSMRDIFEETNMVQDGFLSDDLGDMFLDTSVDF 284

Query: 373 SIGSSSWPTGDDYLHDYGDIFRSDPLVAL 459
             G SSW    D   D  D+F SDPL+A+
Sbjct: 285 GFGLSSWNNTQDNFQDIADLFGSDPLIAI 313


>ref|XP_002299493.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222846751|gb|EEE84298.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 347

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 49/157 (31%), Positives = 66/157 (42%), Gaps = 15/157 (9%)
 Frame = +1

Query: 31  PSSLSSGYNSGNESHNNSITNK-----TTSPKSVLRFPSSSMDKSAAESTHHSPSNDGAN 195
           P + +SGY SG+ES++N   N       +SP SVLRF   +  +SA+ S     +     
Sbjct: 194 PLAATSGYISGDESNSNYNINNDGVVNVSSPISVLRFSEEAETQSASSSREIRDTGTEVP 253

Query: 196 EASELTALPDTFSDFWPXXXXXXXXXXXXXAKLDPC--------IFDPTMFQESDPL--D 345
           E  E + + +  SDF                  D C        IF+ T F     L  D
Sbjct: 254 EVKEDSCVSENLSDF---SEYNSSIDSLFPPTTDICELRSSMRNIFEETSFAAGGFLKDD 310

Query: 346 MFFVSSKDFSIGSSSWPTGDDYLHDYGDIFRSDPLVA 456
            F     DF  G SSW    D+  D GD+F SD L+A
Sbjct: 311 DFRDMDLDFGFGLSSWNV-QDHFQDIGDLFGSDSLIA 346


>ref|XP_004149766.1| PREDICTED: ethylene-responsive transcription factor CRF2-like
           [Cucumis sativus] gi|449527296|ref|XP_004170648.1|
           PREDICTED: ethylene-responsive transcription factor
           CRF2-like [Cucumis sativus]
          Length = 319

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 48/158 (30%), Positives = 64/158 (40%), Gaps = 11/158 (6%)
 Frame = +1

Query: 19  PETKPSSLSSGYNSGNESHNNSITNKTTSPKSVLRFPSSSMDKSAAESTHHSPSNDGANE 198
           PET P+ +SSGY S  ES++N      +SP SVLR PS S + + +E    +   +   E
Sbjct: 174 PETTPA-VSSGYVSTEESNDN-----LSSPTSVLRCPSPSANDAVSEKASATTGKEIRGE 227

Query: 199 ASEL-----------TALPDTFSDFWPXXXXXXXXXXXXXAKLDPCIFDPTMFQESDPLD 345
            SE            T  P+   DF               A L             D  +
Sbjct: 228 ESEKFSDFSFHSNCDTFFPNDIFDFQAPVPSPFEDKLLNDALLKGDYGSSMFINPGDDFE 287

Query: 346 MFFVSSKDFSIGSSSWPTGDDYLHDYGDIFRSDPLVAL 459
                   F  G S+W T +D   D+ DIF SDPL+AL
Sbjct: 288 F------GFGFGLSTWHTVEDSFLDFSDIFGSDPLLAL 319


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