BLASTX nr result

ID: Atractylodes22_contig00019987 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00019987
         (646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269703.1| PREDICTED: H/ACA ribonucleoprotein complex s...   236   4e-60
ref|XP_002311407.1| predicted protein [Populus trichocarpa] gi|1...   230   1e-58
gb|AFK48249.1| unknown [Lotus japonicus]                              229   3e-58
ref|XP_002512015.1| H/ACA ribonucleoprotein complex subunit, put...   229   3e-58
dbj|BAJ53160.1| JHL10I11.6 [Jatropha curcas]                          229   4e-58

>ref|XP_002269703.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 2-like protein
           [Vitis vinifera] gi|147867156|emb|CAN80504.1|
           hypothetical protein VITISV_035185 [Vitis vinifera]
           gi|297734127|emb|CBI15374.3| unnamed protein product
           [Vitis vinifera]
          Length = 157

 Score =  236 bits (601), Expect = 4e-60
 Identities = 116/156 (74%), Positives = 132/156 (84%)
 Frame = -2

Query: 573 GSDSXXXXXXXXXXXXXKLQALAPIAKPLAGKKLSKRTLKLVRKAAEHKCVKRGVKEVVK 394
           GSDS             KL ALAPIAKPLAGKKL KRTLKL+R+AAEHKC+KRGVKEVVK
Sbjct: 2   GSDSEAERSAHKEKEKKKLSALAPIAKPLAGKKLCKRTLKLIRRAAEHKCLKRGVKEVVK 61

Query: 393 SIRRGNKGVCVIAGNITPIDVITHVPILCEEAEIPYVYVSSKEDLANAGATKRPTCCILV 214
            IRRG+KG CVIAGNITPIDVITHVPILCEEA+IPYVYV SKEDLANAG+TKRPTCC+LV
Sbjct: 62  GIRRGDKGFCVIAGNITPIDVITHVPILCEEADIPYVYVPSKEDLANAGSTKRPTCCVLV 121

Query: 213 LPKPTKGELGEEDQQKLKTEYDQVASEITSLAASMF 106
           L KPTKGELG+E+Q+KLK EY QV S+++ L +++F
Sbjct: 122 LTKPTKGELGQEEQEKLKAEYTQVVSDVSGLTSTLF 157


>ref|XP_002311407.1| predicted protein [Populus trichocarpa] gi|118483385|gb|ABK93593.1|
           unknown [Populus trichocarpa]
           gi|118485555|gb|ABK94629.1| unknown [Populus
           trichocarpa] gi|222851227|gb|EEE88774.1| predicted
           protein [Populus trichocarpa]
          Length = 155

 Score =  230 bits (587), Expect = 1e-58
 Identities = 108/138 (78%), Positives = 130/138 (94%)
 Frame = -2

Query: 519 LQALAPIAKPLAGKKLSKRTLKLVRKAAEHKCVKRGVKEVVKSIRRGNKGVCVIAGNITP 340
           + +LAPIAKPLAGKKL KRTLKLVRKA+E KC+KRGVKEVVKSIRRG+KG+C+IAGNI+P
Sbjct: 18  ITSLAPIAKPLAGKKLCKRTLKLVRKASESKCLKRGVKEVVKSIRRGHKGLCIIAGNISP 77

Query: 339 IDVITHVPILCEEAEIPYVYVSSKEDLANAGATKRPTCCILVLPKPTKGELGEEDQQKLK 160
           IDVITHVPILCEE++IPYVYV+SKEDLA+AGATKRPTCC+LVL KPTKGE+G+EDQ+KLK
Sbjct: 78  IDVITHVPILCEESDIPYVYVTSKEDLASAGATKRPTCCVLVLTKPTKGEIGKEDQEKLK 137

Query: 159 TEYDQVASEITSLAASMF 106
            +YDQV S+++ L +S+F
Sbjct: 138 ADYDQVVSDVSELTSSLF 155


>gb|AFK48249.1| unknown [Lotus japonicus]
          Length = 157

 Score =  229 bits (584), Expect = 3e-58
 Identities = 111/156 (71%), Positives = 134/156 (85%)
 Frame = -2

Query: 573 GSDSXXXXXXXXXXXXXKLQALAPIAKPLAGKKLSKRTLKLVRKAAEHKCVKRGVKEVVK 394
           GSDS             KL A+APIAKPLAGKKL KRTLKLVR+AAEHKC+KRGVKEVVK
Sbjct: 2   GSDSEGEKSVQKEKERKKLLAVAPIAKPLAGKKLCKRTLKLVRRAAEHKCLKRGVKEVVK 61

Query: 393 SIRRGNKGVCVIAGNITPIDVITHVPILCEEAEIPYVYVSSKEDLANAGATKRPTCCILV 214
           SIRRG+KG+CVIAGNI+PIDVITHVP+LCEE+++PYVYV+SKEDLA+AGATKRPTCC+LV
Sbjct: 62  SIRRGHKGLCVIAGNISPIDVITHVPVLCEESDVPYVYVTSKEDLASAGATKRPTCCVLV 121

Query: 213 LPKPTKGELGEEDQQKLKTEYDQVASEITSLAASMF 106
           L KP KGE+ + +Q+KLK++YDQV S++T + AS+F
Sbjct: 122 LTKPAKGEMEKGEQEKLKSDYDQVVSDVTEITASLF 157


>ref|XP_002512015.1| H/ACA ribonucleoprotein complex subunit, putative [Ricinus
           communis] gi|223549195|gb|EEF50684.1| H/ACA
           ribonucleoprotein complex subunit, putative [Ricinus
           communis]
          Length = 157

 Score =  229 bits (584), Expect = 3e-58
 Identities = 113/156 (72%), Positives = 133/156 (85%)
 Frame = -2

Query: 573 GSDSXXXXXXXXXXXXXKLQALAPIAKPLAGKKLSKRTLKLVRKAAEHKCVKRGVKEVVK 394
           GSDS             K+ AL+PIAKPLAGKKL KRTLKLVRKAAEHKC+KRGVKEVVK
Sbjct: 2   GSDSEAERSHKHEKEKKKIIALSPIAKPLAGKKLCKRTLKLVRKAAEHKCLKRGVKEVVK 61

Query: 393 SIRRGNKGVCVIAGNITPIDVITHVPILCEEAEIPYVYVSSKEDLANAGATKRPTCCILV 214
           SIRRG+KG+CVIAGNI+PIDVITHVPILCEEA+IPYVYV SKEDLANAG TKRPTCC+LV
Sbjct: 62  SIRRGHKGLCVIAGNISPIDVITHVPILCEEADIPYVYVPSKEDLANAGVTKRPTCCVLV 121

Query: 213 LPKPTKGELGEEDQQKLKTEYDQVASEITSLAASMF 106
           L KP KGE+ +E+Q+KLK ++ QVA++++ LA+S+F
Sbjct: 122 LTKPPKGEIPQEEQEKLKADFSQVAADVSELASSLF 157


>dbj|BAJ53160.1| JHL10I11.6 [Jatropha curcas]
          Length = 155

 Score =  229 bits (583), Expect = 4e-58
 Identities = 106/136 (77%), Positives = 129/136 (94%)
 Frame = -2

Query: 513 ALAPIAKPLAGKKLSKRTLKLVRKAAEHKCVKRGVKEVVKSIRRGNKGVCVIAGNITPID 334
           AL+PIAKPLAGKKLSK+TLKLVRKAAEHKC+KRGVKEVVKSIRRG+KG+CVIAGNI+PID
Sbjct: 20  ALSPIAKPLAGKKLSKKTLKLVRKAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPID 79

Query: 333 VITHVPILCEEAEIPYVYVSSKEDLANAGATKRPTCCILVLPKPTKGELGEEDQQKLKTE 154
           VITHVPILCEE++IPY+YVSSKEDLANAGATKRPTCC+LVL KP KG++G+E+Q+KLK +
Sbjct: 80  VITHVPILCEESDIPYIYVSSKEDLANAGATKRPTCCVLVLTKPPKGDIGQEEQEKLKAD 139

Query: 153 YDQVASEITSLAASMF 106
           + QV ++++ L +S+F
Sbjct: 140 FSQVVADVSELTSSLF 155


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