BLASTX nr result

ID: Atractylodes22_contig00019971 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00019971
         (619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83839.1| hypothetical protein VITISV_023230 [Vitis vinifera]    88   1e-15
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]    75   7e-12
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]    57   1e-08
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni...    55   4e-08
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group...    50   2e-07

>emb|CAN83839.1| hypothetical protein VITISV_023230 [Vitis vinifera]
          Length = 731

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 66/210 (31%), Positives = 94/210 (44%), Gaps = 4/210 (1%)
 Frame = -2

Query: 618 FPHIRDYLKQKLDFCSNKCVFIGYSPHHKGYKCLHPSEEFT*LKV*CSINLNFHLHKIFY 439
           FPH+R Y   KL F S+KC+F+GYS  HKGY CLHP       K+  S N+ F+ H+  Y
Sbjct: 100 FPHLRPYNSHKLQFRSSKCLFLGYSSTHKGYLCLHPFG-----KIYISRNVIFNEHEFPY 154

Query: 438 QPQLPLQYIKDPSLNNYVHRLPPISN----NNDCQINTQSASFTPKNQISPVTSLPTQXX 271
              L L+Y     ++     LP  S+       C          P+  + PV S      
Sbjct: 155 SELLGLKYDVSHPIS-----LPESSSLFTTFCSCYAAVVKDMIRPRTNLLPVASAIASGI 209

Query: 270 XXXXXXSNDRTHI*CFQTSPILHINQXXXXXXXXXXXPMITRSKTGIYKPKIFLVSCQFP 91
                    +  +    TSP    +            PMITR+K GI+KPK++  + + P
Sbjct: 210 QYGLRQPT-QIPLLDVHTSPTSQPSMSLSAHAPAPCHPMITRAKAGIFKPKVY-AALKHP 267

Query: 90  IIINQLNQSVPTSAEQALTDPPWKVAIDEE 1
           +  + L    P   +Q L DP WK+A+ EE
Sbjct: 268 LSFS-LGSIEPMCVKQVLADPNWKIAMKEE 296


>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
          Length = 1271

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 58/206 (28%), Positives = 91/206 (44%)
 Frame = -2

Query: 618  FPHIRDYLKQKLDFCSNKCVFIGYSPHHKGYKCLHPSEEFT*LKV*CSINLNFHLHKIFY 439
            +P+IR Y K KL + S++CVF+GYS +HKGY CL+P           +  L    H +F+
Sbjct: 559  YPYIRPYNKNKLSYRSSQCVFLGYSSNHKGYMCLNP----------LTGRLYVTRHVVFH 608

Query: 438  QPQLPLQYIKDPSLNNYVHRLPPISNNNDCQINTQSASFTPKNQISPVTSLPTQXXXXXX 259
            +   P Q   D S +      P     +   +++  +  TP     P+T++P+       
Sbjct: 609  ETVFPFQSTPDQSSSVVTIPTPAFLPCSSPPVSSLRSHTTPSTSSPPLTNMPSSTISLPD 668

Query: 258  XXSNDRTHI*CFQTSPILHINQXXXXXXXXXXXPMITRSKTGIYKPKIFLVSCQFPIIIN 79
                    I    TS     NQ           PM+TR+K GI K K++  S        
Sbjct: 669  LIQVPFADI---STSEPHPTNQ----------HPMVTRAKNGISKKKVYFSS-------- 707

Query: 78   QLNQSVPTSAEQALTDPPWKVAIDEE 1
              + S PT+  QA+ D  W +A+++E
Sbjct: 708  --HISEPTTFTQAVKDSNWVLAMEKE 731


>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
          Length = 1262

 Score = 56.6 bits (135), Expect(2) = 1e-08
 Identities = 23/35 (65%), Positives = 27/35 (77%)
 Frame = -2

Query: 618 FPHIRDYLKQKLDFCSNKCVFIGYSPHHKGYKCLH 514
           FPH+R Y K KLDF S+ C F+GYS  HKGYKCL+
Sbjct: 548 FPHLRPYNKHKLDFRSSPCTFLGYSSKHKGYKCLN 582



 Score = 28.1 bits (61), Expect(2) = 1e-08
 Identities = 10/19 (52%), Positives = 17/19 (89%)
 Frame = -1

Query: 508 GRVYIAKSVMFNKLEFPFA 452
           GR++I++SV+F++  FPFA
Sbjct: 585 GRMFISRSVVFDETRFPFA 603


>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
           gi|108706314|gb|ABF94109.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1247

 Score = 55.1 bits (131), Expect(2) = 4e-08
 Identities = 22/37 (59%), Positives = 28/37 (75%)
 Frame = -2

Query: 618 FPHIRDYLKQKLDFCSNKCVFIGYSPHHKGYKCLHPS 508
           +PH+R Y  +KL F S +C F+GYSP HKG+KCL PS
Sbjct: 485 WPHLRPYNARKLQFRSKQCTFLGYSPLHKGFKCLDPS 521



 Score = 27.7 bits (60), Expect(2) = 4e-08
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -1

Query: 514 SLGRVYIAKSVMFNKLEFPFA 452
           S GRVYI+  V+F++  FPFA
Sbjct: 521 STGRVYISHDVIFDENVFPFA 541


>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108708884|gb|ABF96679.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1437

 Score = 50.4 bits (119), Expect(2) = 2e-07
 Identities = 21/37 (56%), Positives = 26/37 (70%)
 Frame = -2

Query: 618 FPHIRDYLKQKLDFCSNKCVFIGYSPHHKGYKCLHPS 508
           +P++R Y K KL F S  C F+GYS  HKG+KCL PS
Sbjct: 685 WPNLRPYNKHKLQFRSTTCTFLGYSTLHKGFKCLDPS 721



 Score = 30.0 bits (66), Expect(2) = 2e-07
 Identities = 11/22 (50%), Positives = 18/22 (81%)
 Frame = -1

Query: 514 SLGRVYIAKSVMFNKLEFPFAQ 449
           S GRVYI++ V+F++ +FPF +
Sbjct: 721 STGRVYISRDVVFDETQFPFTK 742


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