BLASTX nr result

ID: Atractylodes22_contig00019948 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00019948
         (1021 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19367.3| unnamed protein product [Vitis vinifera]              209   7e-52
ref|XP_002320019.1| predicted protein [Populus trichocarpa] gi|2...   201   2e-49
ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 hom...   199   1e-48
ref|XP_002510055.1| protein binding protein, putative [Ricinus c...   184   3e-44
ref|XP_003545351.1| PREDICTED: pre-mRNA-processing factor 40 hom...   170   6e-40

>emb|CBI19367.3| unnamed protein product [Vitis vinifera]
          Length = 1030

 Score =  209 bits (533), Expect = 7e-52
 Identities = 122/270 (45%), Positives = 147/270 (54%), Gaps = 8/270 (2%)
 Frame = -3

Query: 788 QFWPSVHTQQGQPFMQLASGSQQFRPLGQ-------GMPPGQNQLPQFSQPLQQMSAWPG 630
           QF P+V  QQG PF+  AS  QQFRP+GQ       G P GQNQ PQFSQ +QQ+   P 
Sbjct: 33  QFRPAVPGQQGHPFIPAAS--QQFRPIGQNISSPNVGGPSGQNQPPQFSQAMQQLPPRPN 90

Query: 629 QPVHTTPSSLASQMPFMHPNMTSTSCSPQFQNSATP-NNHVPGLGGPGVNLXXXXXXXXX 453
           QP    PSS    MP++  N   TS SPQ   +A P N+H+PGL GPG+           
Sbjct: 91  QPGPIAPSSQPIPMPYIQQNRPLTSSSPQPNQTAPPLNSHMPGLAGPGMPFSSSYTFAPA 150

Query: 452 XFGQAQNAMNVPSQFQSVSQMHTPITPLGGQHWLPSGTQGAPAVTXXXXXXXXXXXXXXX 273
            FGQ Q+ +N  +QFQ +SQMH P+   GGQ WL SG+Q    VT               
Sbjct: 151 SFGQPQSTINASAQFQPISQMHAPV---GGQPWLSSGSQSGALVT--------------- 192

Query: 272 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEASSDWQEYTSGDGRRYFYNKRTNIS 93
                                             ++SSDWQE+TS DGRRY+YNK+T +S
Sbjct: 193 ---------PVHQAGQQPSVTADIPAGNVPNPTHQSSSDWQEHTSADGRRYYYNKKTRLS 243

Query: 92  SWEKPLELMTPLERTDASTVWKEFTTAEGK 3
           SWEKPLELMTP+ER DASTVWKEFTT EG+
Sbjct: 244 SWEKPLELMTPIERADASTVWKEFTTPEGR 273


>ref|XP_002320019.1| predicted protein [Populus trichocarpa] gi|222860792|gb|EEE98334.1|
           predicted protein [Populus trichocarpa]
          Length = 1019

 Score =  201 bits (512), Expect = 2e-49
 Identities = 121/277 (43%), Positives = 149/277 (53%), Gaps = 7/277 (2%)
 Frame = -3

Query: 812 NNFQNSGAQFWPSVHTQQGQPFMQLASGSQQFRPLGQGMPPG-------QNQLPQFSQPL 654
           +N Q+SG QF P V TQQGQPF+Q+AS  QQFRP+GQGMP         Q+Q  QFSQP+
Sbjct: 3   SNPQSSGGQFRPMVPTQQGQPFIQVAS--QQFRPVGQGMPSSHVGMPAVQSQHLQFSQPI 60

Query: 653 QQMSAWPGQPVHTTPSSLASQMPFMHPNMTSTSCSPQFQNSATPNNHVPGLGGPGVNLXX 474
           QQ+  WP QP    PS+ A  MP+   N   TS  PQ QN+   +NH+  +G  GV    
Sbjct: 61  QQLPPWPNQP--GAPSAQALSMPYGQLNRPLTSSQPQ-QNAPPLSNHMHVVGTSGVPNSS 117

Query: 473 XXXXXXXXFGQAQNAMNVPSQFQSVSQMHTPITPLGGQHWLPSGTQGAPAVTXXXXXXXX 294
                   FG  QN+ +   QF  +SQMH  + P+GGQ WL SG+ GA  V         
Sbjct: 118 PYAFAPSSFGLTQNSASALPQFPPMSQMHAHVVPMGGQPWLSSGSHGASLV--------- 168

Query: 293 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEASSDWQEYTSGDGRRYFY 114
                                                   Q++ SDWQE+T+ DGRRY+Y
Sbjct: 169 --------------PPVQPTVVQPSISSSSDSTVAVSSNSQQSLSDWQEHTASDGRRYYY 214

Query: 113 NKRTNISSWEKPLELMTPLERTDASTVWKEFTTAEGK 3
           N+RT  SSW+KP ELMTP+ER DASTVWKEFTT EGK
Sbjct: 215 NRRTKQSSWDKPFELMTPIERADASTVWKEFTTQEGK 251


>ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Vitis
           vinifera]
          Length = 1020

 Score =  199 bits (505), Expect = 1e-48
 Identities = 120/270 (44%), Positives = 144/270 (53%), Gaps = 8/270 (2%)
 Frame = -3

Query: 788 QFWPSVHTQQGQPFMQLASGSQQFRPLGQ-------GMPPGQNQLPQFSQPLQQMSAWPG 630
           QF P+V  QQG PF+  AS  QQFRP+GQ       G P GQNQ PQFSQ +QQ+   P 
Sbjct: 47  QFRPAVPGQQGHPFIPAAS--QQFRPIGQNISSPNVGGPSGQNQPPQFSQAMQQLPPRPN 104

Query: 629 QPVHTTPSSLASQMPFMHPNMTSTSCSPQFQNSATP-NNHVPGLGGPGVNLXXXXXXXXX 453
           QP    PSS    MP++  N   TS SPQ   +A P N+H+PGL  P             
Sbjct: 105 QPGPIAPSSQPIPMPYIQQNRPLTSSSPQPNQTAPPLNSHMPGLFAPA------------ 152

Query: 452 XFGQAQNAMNVPSQFQSVSQMHTPITPLGGQHWLPSGTQGAPAVTXXXXXXXXXXXXXXX 273
            FGQ Q+ +N  +QFQ +SQMH P+   GGQ WL SG+Q    VT               
Sbjct: 153 SFGQPQSTINASAQFQPISQMHAPV---GGQPWLSSGSQSGALVT--------------- 194

Query: 272 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEASSDWQEYTSGDGRRYFYNKRTNIS 93
                                             ++SSDWQE+TS DGRRY+YNK+T +S
Sbjct: 195 -------PVHQAGQQPSVTADIPVSAGNVPNPTHQSSSDWQEHTSADGRRYYYNKKTRLS 247

Query: 92  SWEKPLELMTPLERTDASTVWKEFTTAEGK 3
           SWEKPLELMTP+ER DASTVWKEFTT EG+
Sbjct: 248 SWEKPLELMTPIERADASTVWKEFTTPEGR 277


>ref|XP_002510055.1| protein binding protein, putative [Ricinus communis]
           gi|223550756|gb|EEF52242.1| protein binding protein,
           putative [Ricinus communis]
          Length = 970

 Score =  184 bits (467), Expect = 3e-44
 Identities = 120/280 (42%), Positives = 138/280 (49%), Gaps = 10/280 (3%)
 Frame = -3

Query: 812 NNFQNSGAQFWPSVHTQQGQPFMQLASGSQQFRPLGQGMPP--------GQNQLPQFSQP 657
           N  Q+SG QF P+   QQGQPFM      QQF P+ QGMP         GQ Q  QFSQP
Sbjct: 3   NTSQSSGTQFRPA---QQGQPFMP-----QQFLPVVQGMPSNVGMPMPAGQTQTLQFSQP 54

Query: 656 LQQMSAWPGQPVHTTPSSLASQMP-FMHPNMTS-TSCSPQFQNSATPNNHVPGLGGPGVN 483
           +Q    WP  P H  PSS    +P ++H N    TS  PQ Q +A+       L  P   
Sbjct: 55  MQP-PPWPNHPAHVAPSSQPVPLPPYVHQNRPPLTSGPPQLQQTAS-------LFAPS-- 104

Query: 482 LXXXXXXXXXXFGQAQNAMNVPSQFQSVSQMHTPITPLGGQHWLPSGTQGAPAVTXXXXX 303
                      +GQ QN     SQFQ + QMHTP+ P GGQHWLPSG+ G    T     
Sbjct: 105 ----------SYGQLQNNAISSSQFQPMPQMHTPVVPAGGQHWLPSGSNGVAVAT----- 149

Query: 302 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEASSDWQEYTSGDGRR 123
                                                      Q++ SDWQE+T+ DGRR
Sbjct: 150 --------------------PVQPTGQQPSVSSSSDSVLNVPNQQSLSDWQEHTASDGRR 189

Query: 122 YFYNKRTNISSWEKPLELMTPLERTDASTVWKEFTTAEGK 3
           Y+YNKRT  SSWEKPLELMTPLER DASTVWKEFTT EGK
Sbjct: 190 YYYNKRTKQSSWEKPLELMTPLERADASTVWKEFTTPEGK 229


>ref|XP_003545351.1| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Glycine
           max]
          Length = 1002

 Score =  170 bits (430), Expect = 6e-40
 Identities = 111/278 (39%), Positives = 137/278 (49%), Gaps = 8/278 (2%)
 Frame = -3

Query: 812 NNFQNSGAQFWPSVHTQQGQPFMQLASGSQQFRPLGQ-------GMPPGQNQLPQFSQPL 654
           NN Q S  QF P    QQGQPF+ +   SQQF P G        GMP  Q Q  Q+SQP+
Sbjct: 3   NNSQPSSMQFRPVTQAQQGQPFVPM--NSQQFGPAGHAIPSSNAGMPVIQGQQLQYSQPM 60

Query: 653 QQMSAWPGQPVHTTPSSLASQMPFMHPNMTSTSCSPQFQNSATP-NNHVPGLGGPGVNLX 477
           QQ++  P QP H  PSS A  M ++  N   TS  P  Q +  P +NH+PGL        
Sbjct: 61  QQLTQRPMQPGHPAPSSQAIPMQYIQTNRPLTSIPPHSQQNVPPLSNHMPGLAVSVA--A 118

Query: 476 XXXXXXXXXFGQAQNAMNVPSQFQSVSQMHTPITPLGGQHWLPSGTQGAPAVTXXXXXXX 297
                    +GQ Q+  N  +Q+Q   QM  P +   GQ W  S +Q A AVT       
Sbjct: 119 PHSSYFTLSYGQQQDNANALAQYQHPPQMFAPPS---GQPWPSSASQSAVAVTSVQPAGV 175

Query: 296 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEASSDWQEYTSGDGRRYF 117
                                                    Q++ SDWQE+TS DGRRY+
Sbjct: 176 QSSGATSTDAVINATN-------------------------QQSLSDWQEHTSADGRRYY 210

Query: 116 YNKRTNISSWEKPLELMTPLERTDASTVWKEFTTAEGK 3
           YNKRT  SSWEKPLELM+P+ER DASTVWKEFT++EG+
Sbjct: 211 YNKRTRQSSWEKPLELMSPIERADASTVWKEFTSSEGR 248


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