BLASTX nr result

ID: Atractylodes22_contig00019921 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00019921
         (684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36942.3| unnamed protein product [Vitis vinifera]              197   2e-48
ref|XP_002275930.1| PREDICTED: DNA mismatch repair protein Msh6-...   197   2e-48
ref|XP_003554547.1| PREDICTED: DNA mismatch repair protein Msh6-...   195   6e-48
ref|XP_003625965.1| DNA mismatch repair protein Msh6-1 [Medicago...   191   2e-46
ref|XP_002320307.1| predicted protein [Populus trichocarpa] gi|2...   191   2e-46

>emb|CBI36942.3| unnamed protein product [Vitis vinifera]
          Length = 1237

 Score =  197 bits (501), Expect = 2e-48
 Identities = 98/131 (74%), Positives = 110/131 (83%)
 Frame = +1

Query: 277  EHHVSWRQLISTAAELDVLISIAIASDLYEGPTCRPLIVDPSVEDEAPFLAAKNLGHPVL 456
            EHH  WRQL+S+ AELDVLIS+AIA+D YEGPTCRP+I   S  +E P   AK+LGHPVL
Sbjct: 891  EHHDKWRQLVSSTAELDVLISLAIANDYYEGPTCRPVISGLSNSNEVPCFTAKSLGHPVL 950

Query: 457  RNDSLGDATFVPNDICIGGSNHARFTLLIGTNMGGKSTLLRQVCLAVILAQVGADVPAEI 636
            R+DSLG  TFVPNDI IGGS+HA F LL G NMGGKSTLLRQVCLAVILAQVGADVPAE 
Sbjct: 951  RSDSLGKGTFVPNDITIGGSDHACFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAES 1010

Query: 637  FKMSPMDRIFV 669
            F++SP+DRIFV
Sbjct: 1011 FELSPVDRIFV 1021


>ref|XP_002275930.1| PREDICTED: DNA mismatch repair protein Msh6-1-like [Vitis vinifera]
          Length = 1297

 Score =  197 bits (501), Expect = 2e-48
 Identities = 98/131 (74%), Positives = 110/131 (83%)
 Frame = +1

Query: 277  EHHVSWRQLISTAAELDVLISIAIASDLYEGPTCRPLIVDPSVEDEAPFLAAKNLGHPVL 456
            EHH  WRQL+S+ AELDVLIS+AIA+D YEGPTCRP+I   S  +E P   AK+LGHPVL
Sbjct: 951  EHHDKWRQLVSSTAELDVLISLAIANDYYEGPTCRPVISGLSNSNEVPCFTAKSLGHPVL 1010

Query: 457  RNDSLGDATFVPNDICIGGSNHARFTLLIGTNMGGKSTLLRQVCLAVILAQVGADVPAEI 636
            R+DSLG  TFVPNDI IGGS+HA F LL G NMGGKSTLLRQVCLAVILAQVGADVPAE 
Sbjct: 1011 RSDSLGKGTFVPNDITIGGSDHACFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAES 1070

Query: 637  FKMSPMDRIFV 669
            F++SP+DRIFV
Sbjct: 1071 FELSPVDRIFV 1081


>ref|XP_003554547.1| PREDICTED: DNA mismatch repair protein Msh6-1-like [Glycine max]
          Length = 1269

 Score =  195 bits (496), Expect = 6e-48
 Identities = 96/131 (73%), Positives = 106/131 (80%)
 Frame = +1

Query: 277  EHHVSWRQLISTAAELDVLISIAIASDLYEGPTCRPLIVDPSVEDEAPFLAAKNLGHPVL 456
            EHH  W+QL+ST AELDVLIS+AIA D YEGPTCRP  V      EAP+L AK+LGHPVL
Sbjct: 933  EHHAKWKQLVSTTAELDVLISLAIAGDYYEGPTCRPSFVGTLCTKEAPYLHAKSLGHPVL 992

Query: 457  RNDSLGDATFVPNDICIGGSNHARFTLLIGTNMGGKSTLLRQVCLAVILAQVGADVPAEI 636
            R+D+LG   FVPNDI IGGS+HA F LL G NMGGKSTLLRQVCL VILAQVGADVPAE 
Sbjct: 993  RSDTLGKGDFVPNDITIGGSDHASFILLTGPNMGGKSTLLRQVCLTVILAQVGADVPAES 1052

Query: 637  FKMSPMDRIFV 669
            F +SP+DRIFV
Sbjct: 1053 FDLSPVDRIFV 1063


>ref|XP_003625965.1| DNA mismatch repair protein Msh6-1 [Medicago truncatula]
            gi|355500980|gb|AES82183.1| DNA mismatch repair protein
            Msh6-1 [Medicago truncatula]
          Length = 1312

 Score =  191 bits (484), Expect = 2e-46
 Identities = 92/131 (70%), Positives = 108/131 (82%)
 Frame = +1

Query: 277  EHHVSWRQLISTAAELDVLISIAIASDLYEGPTCRPLIVDPSVEDEAPFLAAKNLGHPVL 456
            EHH  W+QL+S  AELDVLI++AIASD YEGPTCRP  V     +EAP++ AK+LGHPVL
Sbjct: 975  EHHTQWKQLVSATAELDVLINLAIASDYYEGPTCRPSFVGTLCTNEAPYIYAKSLGHPVL 1034

Query: 457  RNDSLGDATFVPNDICIGGSNHARFTLLIGTNMGGKSTLLRQVCLAVILAQVGADVPAEI 636
            R+D+LG + FVPNDI IGG + A F LL G NMGGKSTLLRQVCLAVILAQVGADVP+E 
Sbjct: 1035 RSDTLGKSAFVPNDITIGGPDQASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPSES 1094

Query: 637  FKMSPMDRIFV 669
            F++SP+DRIFV
Sbjct: 1095 FELSPVDRIFV 1105


>ref|XP_002320307.1| predicted protein [Populus trichocarpa] gi|222861080|gb|EEE98622.1|
            predicted protein [Populus trichocarpa]
          Length = 1288

 Score =  191 bits (484), Expect = 2e-46
 Identities = 94/131 (71%), Positives = 106/131 (80%)
 Frame = +1

Query: 277  EHHVSWRQLISTAAELDVLISIAIASDLYEGPTCRPLIVDPSVEDEAPFLAAKNLGHPVL 456
            ++H  WRQL+S  AELDVLIS+AIASD YEGP C P IV  S+  + P L+AK LGHPVL
Sbjct: 951  KYHDKWRQLVSATAELDVLISLAIASDFYEGPACCPTIVGSSLSSQVPCLSAKKLGHPVL 1010

Query: 457  RNDSLGDATFVPNDICIGGSNHARFTLLIGTNMGGKSTLLRQVCLAVILAQVGADVPAEI 636
            R+DSLG   FVPNDI IGGS  ARF LL G NMGGKSTLLRQVCLAVILAQ+GADVPAE 
Sbjct: 1011 RSDSLGKGAFVPNDISIGGSGRARFILLTGPNMGGKSTLLRQVCLAVILAQIGADVPAES 1070

Query: 637  FKMSPMDRIFV 669
            F++SP+DRIFV
Sbjct: 1071 FELSPVDRIFV 1081


Top