BLASTX nr result

ID: Atractylodes22_contig00019913 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00019913
         (1376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003591343.1| Photosystem Q(B) protein [Medicago truncatul...    78   6e-12
sp|P13910.2|PSBA_VICFA RecName: Full=Photosystem Q(B) protein; A...    78   6e-12
emb|CAD55821.1| putative photosystem II protein [Tectona grandis]      77   8e-12
ref|XP_002519782.1| Photosystem Q(B) protein, putative [Ricinus ...    77   8e-12
gb|ADY76069.1| PsbA [Hydrangea serrata]                                77   1e-11

>ref|XP_003591343.1| Photosystem Q(B) protein [Medicago truncatula]
           gi|355480391|gb|AES61594.1| Photosystem Q(B) protein
           [Medicago truncatula]
          Length = 297

 Score = 77.8 bits (190), Expect = 6e-12
 Identities = 36/47 (76%), Positives = 41/47 (87%)
 Frame = +1

Query: 559 KIIVLHFLLGVACYMGREWELSFRLGMRPWIVVAYSSFPCFSIALIL 699
           ++IVLHFLLGVACYMGREWELSFRLGMRPWIVVAYS+    + A+ L
Sbjct: 77  ELIVLHFLLGVACYMGREWELSFRLGMRPWIVVAYSAPVAAATAVFL 123


>sp|P13910.2|PSBA_VICFA RecName: Full=Photosystem Q(B) protein; AltName: Full=32 kDa
           thylakoid membrane protein; AltName: Full=Photosystem II
           protein D1; Flags: Precursor gi|28564242|emb|CAA35688.2|
           psbA [Vicia faba]
          Length = 353

 Score = 77.8 bits (190), Expect = 6e-12
 Identities = 36/47 (76%), Positives = 41/47 (87%)
 Frame = +1

Query: 559 KIIVLHFLLGVACYMGREWELSFRLGMRPWIVVAYSSFPCFSIALIL 699
           ++IVLHFLLGVACYMGREWELSFRLGMRPWIVVAYS+    + A+ L
Sbjct: 113 ELIVLHFLLGVACYMGREWELSFRLGMRPWIVVAYSAPVAAATAVFL 159


>emb|CAD55821.1| putative photosystem II protein [Tectona grandis]
          Length = 318

 Score = 77.4 bits (189), Expect = 8e-12
 Identities = 36/47 (76%), Positives = 40/47 (85%)
 Frame = +1

Query: 559 KIIVLHFLLGVACYMGREWELSFRLGMRPWIVVAYSSFPCFSIALIL 699
           ++IVLHFLLGVACYMGREWELSFRLGMRPWI VAYSS    + A+ L
Sbjct: 104 ELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSSPVAAATAVFL 150


>ref|XP_002519782.1| Photosystem Q(B) protein, putative [Ricinus communis]
           gi|223541021|gb|EEF42578.1| Photosystem Q(B) protein,
           putative [Ricinus communis]
          Length = 263

 Score = 77.4 bits (189), Expect = 8e-12
 Identities = 34/37 (91%), Positives = 37/37 (100%)
 Frame = +1

Query: 559 KIIVLHFLLGVACYMGREWELSFRLGMRPWIVVAYSS 669
           ++IVLHFLLGVACYMGREWELSFRLGMRPWIVVAYS+
Sbjct: 113 ELIVLHFLLGVACYMGREWELSFRLGMRPWIVVAYSA 149


>gb|ADY76069.1| PsbA [Hydrangea serrata]
          Length = 353

 Score = 76.6 bits (187), Expect = 1e-11
 Identities = 36/47 (76%), Positives = 41/47 (87%)
 Frame = +1

Query: 559 KIIVLHFLLGVACYMGREWELSFRLGMRPWIVVAYSSFPCFSIALIL 699
           ++IVLHFLLGVACYMGREWELS RLGMRPWIVVAYS+    +IA+ L
Sbjct: 113 ELIVLHFLLGVACYMGREWELSSRLGMRPWIVVAYSAPVAAAIAVFL 159


Top