BLASTX nr result

ID: Atractylodes22_contig00019860 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00019860
         (226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509838.1| zinc finger protein, putative [Ricinus commu...    62   5e-08
ref|XP_002298018.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_002279473.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...    60   1e-07
ref|XP_002278353.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...    60   1e-07
ref|XP_003633623.1| PREDICTED: uncharacterized protein LOC100257...    59   4e-07

>ref|XP_002509838.1| zinc finger protein, putative [Ricinus communis]
           gi|223549737|gb|EEF51225.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 164

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 26/37 (70%), Positives = 31/37 (83%)
 Frame = -3

Query: 224 CRTPFIPDDLQDSFNERLWAASGIADYYGDSSLVSDL 114
           CRTP IPDD+Q++FNERLWAASGI D+YGD S +  L
Sbjct: 128 CRTPVIPDDMQEAFNERLWAASGIPDFYGDYSQIGAL 164


>ref|XP_002298018.1| predicted protein [Populus trichocarpa] gi|222845276|gb|EEE82823.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 26/36 (72%), Positives = 30/36 (83%)
 Frame = -3

Query: 224 CRTPFIPDDLQDSFNERLWAASGIADYYGDSSLVSD 117
           CRTP IPDD+Q+SFNERLWAASGI D+YG+ S   D
Sbjct: 135 CRTPVIPDDMQESFNERLWAASGIPDFYGEYSQTPD 170


>ref|XP_002279473.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Vitis vinifera]
          Length = 168

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 24/32 (75%), Positives = 29/32 (90%)
 Frame = -3

Query: 224 CRTPFIPDDLQDSFNERLWAASGIADYYGDSS 129
           CRTPFIPDD+Q++FNERLWAAS + D+YGD S
Sbjct: 133 CRTPFIPDDMQEAFNERLWAASALPDFYGDYS 164


>ref|XP_002278353.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B [Vitis vinifera]
          Length = 167

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 24/37 (64%), Positives = 30/37 (81%)
 Frame = -3

Query: 224 CRTPFIPDDLQDSFNERLWAASGIADYYGDSSLVSDL 114
           CRTPF+PD++QD FN+RLWAASGI D+Y +   VS L
Sbjct: 131 CRTPFVPDEMQDEFNQRLWAASGITDFYSEYGTVSGL 167


>ref|XP_003633623.1| PREDICTED: uncharacterized protein LOC100257890 [Vitis vinifera]
          Length = 290

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 23/37 (62%), Positives = 29/37 (78%)
 Frame = -3

Query: 224 CRTPFIPDDLQDSFNERLWAASGIADYYGDSSLVSDL 114
           CRTPF+PD++QD FN+RLW ASGI D+Y +   VS L
Sbjct: 254 CRTPFVPDEMQDEFNQRLWVASGITDFYSEYGTVSGL 290


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