BLASTX nr result

ID: Atractylodes22_contig00019854 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00019854
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48359.1| unknown [Lotus japonicus]                               78   8e-13
ref|XP_004144627.1| PREDICTED: RING-H2 finger protein ATL18-like...    69   4e-10
ref|XP_002514390.1| conserved hypothetical protein [Ricinus comm...    65   9e-09
gb|AAD33582.1|AF132014_1 RING-H2 zinc finger protein ATL4 [Arabi...    60   3e-07
ref|XP_002448374.1| hypothetical protein SORBIDRAFT_06g026220 [S...    60   3e-07

>gb|AFK48359.1| unknown [Lotus japonicus]
          Length = 137

 Score = 78.2 bits (191), Expect = 8e-13
 Identities = 44/131 (33%), Positives = 69/131 (52%), Gaps = 11/131 (8%)
 Frame = -3

Query: 548 MMNIVFYICLLIPVLRIKSDLLN----YAKDFMSYLFGYDGVNPRFHEEDVCLVDLPIIR 381
           ++ IVFY C+LIP+  +K  L +    ++KD + +L                +  LP+ R
Sbjct: 13  VVTIVFYTCILIPLKELKGALASLFGLFSKDVVEFL--------------AVISSLPVAR 58

Query: 380 FEDLHNR-------RHRSVDRLCFICSADYDKDDVLCQLSRCGHVFHSDCVGKLLHRKQT 222
           FEDL  +            +++C IC  +++ +D + +L R GHVFH +C+ + L R Q 
Sbjct: 59  FEDLRRQCCCEGGDDDELREKICSICLVEFEGEDAVSKLERRGHVFHLNCIEQWLDRCQF 118

Query: 221 SCPFCRSPLFS 189
           SCP CRS LFS
Sbjct: 119 SCPLCRSFLFS 129


>ref|XP_004144627.1| PREDICTED: RING-H2 finger protein ATL18-like [Cucumis sativus]
           gi|449500186|ref|XP_004161028.1| PREDICTED: RING-H2
           finger protein ATL18-like [Cucumis sativus]
          Length = 125

 Score = 69.3 bits (168), Expect = 4e-10
 Identities = 41/130 (31%), Positives = 67/130 (51%), Gaps = 5/130 (3%)
 Frame = -3

Query: 557 SKMMMNIVFYICLLIPVLRIKSDLLNYAKDFMSYLFGYDGVNPRFHEEDV-----CLVDL 393
           S  M  IVF  C+ IP+ ++K+ + +           +D ++ R  +        C V L
Sbjct: 7   SMSMATIVFLTCVWIPLSQLKAAISSM----------FDILSGRTCQMLTTASLPCEVKL 56

Query: 392 PIIRFEDLHNRRHRSVDRLCFICSADYDKDDVLCQLSRCGHVFHSDCVGKLLHRKQTSCP 213
            + RFE+L  R   S + +C +C  ++ ++ ++ QL RC HVFH +C+   L R Q +CP
Sbjct: 57  LVCRFEELQ-RAVGSEEEICSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCP 115

Query: 212 FCRSPLFSGL 183
            CRS +F  L
Sbjct: 116 LCRSFIFQPL 125


>ref|XP_002514390.1| conserved hypothetical protein [Ricinus communis]
           gi|223546487|gb|EEF47986.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 85

 Score = 64.7 bits (156), Expect = 9e-09
 Identities = 28/72 (38%), Positives = 42/72 (58%)
 Frame = -3

Query: 407 CLVDLPIIRFEDLHNRRHRSVDRLCFICSADYDKDDVLCQLSRCGHVFHSDCVGKLLHRK 228
           C+  +   RF +L      S + LC IC  ++++ D + Q+SRC H+FH DC+ K L R 
Sbjct: 12  CINGVAAARFGELQRCGSGSDENLCCICLVEFEEGDEVSQVSRCMHLFHLDCIAKWLQRH 71

Query: 227 QTSCPFCRSPLF 192
             +CP CRS +F
Sbjct: 72  NFTCPLCRSLVF 83


>gb|AAD33582.1|AF132014_1 RING-H2 zinc finger protein ATL4 [Arabidopsis thaliana]
          Length = 326

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 37/106 (34%), Positives = 50/106 (47%), Gaps = 7/106 (6%)
 Frame = -3

Query: 419 EEDVCLVDLPIIRFEDLHNRRHRSVDRLCFICSADYDKDDVLCQLSRCGHVFHSDCVGKL 240
           E    L  LPI +F  +  R        C +C + ++ +D L  L  C H FH+DC+   
Sbjct: 81  ERSSVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFESEDQLRLLPLCCHAFHADCIDIW 140

Query: 239 LHRKQTSCPFCRSPLFS-------GLSPVSCNNNF*KHQRRLEFCS 123
           L   QT CP CRSPLF+        L+ V  NN   ++  RLE  S
Sbjct: 141 LVSNQT-CPLCRSPLFASESDLMKSLAVVGSNNGGGENSFRLEIGS 185


>ref|XP_002448374.1| hypothetical protein SORBIDRAFT_06g026220 [Sorghum bicolor]
           gi|241939557|gb|EES12702.1| hypothetical protein
           SORBIDRAFT_06g026220 [Sorghum bicolor]
          Length = 194

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
 Frame = -3

Query: 491 DLLNYAKDFMSYLFGYDGVNPRFHEEDVCLVD--LPIIRFEDLHNRRHRSVDRLCFICSA 318
           DLL+   D    L       P F      +++  LP++RF++L   R   V   C +C +
Sbjct: 41  DLLDLGDDHHQALLQQQHRRPEFRAVPAMVIEEVLPVVRFDELEEAR---VGGDCAVCLS 97

Query: 317 DYDKDDVLCQLSRCGHVFHSDCVGKLLHRKQTSCPFCRSPL 195
                D + +LS C HVFH  C+ + +   Q +CP CR+PL
Sbjct: 98  GIGGRDEVRRLSNCRHVFHRACLDRWMEHDQRTCPLCRAPL 138


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