BLASTX nr result

ID: Atractylodes22_contig00019834 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00019834
         (750 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511675.1| Auxin-induced protein X10A, putative [Ricinu...    65   2e-16
gb|AFK48613.1| unknown [Medicago truncatula]                           63   3e-15
ref|NP_191628.1| SAUR-like auxin-responsive protein [Arabidopsis...    62   2e-13
ref|NP_192978.1| SAUR-like auxin-responsive protein [Arabidopsis...    53   2e-10
ref|XP_004160639.1| PREDICTED: uncharacterized LOC101208334 [Cuc...    69   1e-09

>ref|XP_002511675.1| Auxin-induced protein X10A, putative [Ricinus communis]
           gi|223548855|gb|EEF50344.1| Auxin-induced protein X10A,
           putative [Ricinus communis]
          Length = 168

 Score = 65.1 bits (157), Expect(2) = 2e-16
 Identities = 28/35 (80%), Positives = 31/35 (88%)
 Frame = +3

Query: 645 VPKGKMAVYVGQNDGDFERVLVPVLYINHPLFGQL 749
           VPKG +AVYVGQ DGDF RVLVPV+Y NHPLFG+L
Sbjct: 86  VPKGHLAVYVGQKDGDFHRVLVPVIYFNHPLFGEL 120



 Score = 47.0 bits (110), Expect(2) = 2e-16
 Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
 Frame = +2

Query: 287 MKKIRGFLLKHRVISLFRCVRRRNQTSSAGYRRLNPSS-----RSLSKLLKWGARLKAKA 451
           M K +GF +  R++ + R + RR + +   Y RL  S      + L+KL+ WG RL   A
Sbjct: 1   MMKFKGFKIGKRLVRISRWIFRRTRNNPR-YDRLCSSGPTCRLKPLTKLINWGRRLTKGA 59

Query: 452 TAICSKNPGFRLDYLRLGGDPIEE 523
            ++CS  PG    Y  +G +PI E
Sbjct: 60  KSLCSAKPG--SGYTHIGEEPIHE 81


>gb|AFK48613.1| unknown [Medicago truncatula]
          Length = 162

 Score = 63.2 bits (152), Expect(2) = 3e-15
 Identities = 27/35 (77%), Positives = 31/35 (88%)
 Frame = +3

Query: 645 VPKGKMAVYVGQNDGDFERVLVPVLYINHPLFGQL 749
           VPKG +AVYVGQ DG+F RVLVPV+Y NHPLFG+L
Sbjct: 79  VPKGHLAVYVGQKDGEFRRVLVPVVYFNHPLFGEL 113



 Score = 44.7 bits (104), Expect(2) = 3e-15
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
 Frame = +2

Query: 377 YRRLNPSSRS---LSKLLKWGARLKAKATAICSKNPGFRLDYLRLGGDPIEET 526
           YRRL  S       +KLL WG ++  KA ++CSK    +  YL +G DP+E++
Sbjct: 23  YRRLGASPEKNHLTTKLLSWGRKITTKARSLCSKAGSGKFGYLPVGSDPVEQS 75


>ref|NP_191628.1| SAUR-like auxin-responsive protein [Arabidopsis thaliana]
           gi|14190479|gb|AAK55720.1|AF380639_1 AT3g60690/T4C21_100
           [Arabidopsis thaliana] gi|7329679|emb|CAB82673.1|
           putative protein [Arabidopsis thaliana]
           gi|15809736|gb|AAL06796.1| AT3g60690/T4C21_100
           [Arabidopsis thaliana] gi|332646576|gb|AEE80097.1|
           SAUR-like auxin-responsive protein [Arabidopsis
           thaliana]
          Length = 170

 Score = 62.0 bits (149), Expect(2) = 2e-13
 Identities = 25/35 (71%), Positives = 31/35 (88%)
 Frame = +3

Query: 645 VPKGKMAVYVGQNDGDFERVLVPVLYINHPLFGQL 749
           VPKG  AVY+G+ DGDF+RVLVP++Y NHPLFG+L
Sbjct: 88  VPKGHSAVYIGKKDGDFQRVLVPIVYFNHPLFGEL 122



 Score = 40.0 bits (92), Expect(2) = 2e-13
 Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
 Frame = +2

Query: 287 MKKIRGFLLKHRVISLFRCVRRRNQTSSAGYRRLNPS-----SRSLSKLLKWGARLKA-K 448
           M+K+RG  ++  +  + R + RR +   + Y RL+P+      R+++KL+ WG  L +  
Sbjct: 1   MRKLRGIKIRRPIKQISRWILRRIKIRRSRYTRLSPNRPVCKPRAITKLISWGRSLTSHS 60

Query: 449 ATAICSK--NPGFRLDYLRLGGDPIEE 523
           A  I SK  N G    Y+ +G +PI E
Sbjct: 61  ARFIGSKCSNSG----YIPIGQEPIRE 83


>ref|NP_192978.1| SAUR-like auxin-responsive protein [Arabidopsis thaliana]
           gi|5281052|emb|CAB45988.1| putative protein [Arabidopsis
           thaliana] gi|7267943|emb|CAB78284.1| putative protein
           [Arabidopsis thaliana] gi|332657727|gb|AEE83127.1|
           SAUR-like auxin-responsive protein [Arabidopsis
           thaliana]
          Length = 157

 Score = 53.1 bits (126), Expect(2) = 2e-10
 Identities = 21/39 (53%), Positives = 31/39 (79%)
 Frame = +3

Query: 633 AHAAVPKGKMAVYVGQNDGDFERVLVPVLYINHPLFGQL 749
           ++  VP+G + V+VG++D D  RV+VPV+Y NHPLFG+L
Sbjct: 72  SNRVVPRGHLVVHVGESDDDTRRVVVPVIYFNHPLFGEL 110



 Score = 38.1 bits (87), Expect(2) = 2e-10
 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
 Frame = +2

Query: 287 MKKIRGFLLKHRVISLFRCVRRRNQTSSAGYRRLNPSS--RSLSKLLKWGARLKAKATAI 460
           MK++RGF + HR + +F+ + R    +    R  NP +  RSL++ L  GA+   +    
Sbjct: 1   MKRVRGFKIGHRFVKIFKWIPRNRCPT----RITNPVTGIRSLARCLSRGAK---RLCGG 53

Query: 461 CSKNPGFRLDYLRLGGDP 514
             KNPG   + +RLG DP
Sbjct: 54  SKKNPG--QNQIRLGKDP 69


>ref|XP_004160639.1| PREDICTED: uncharacterized LOC101208334 [Cucumis sativus]
          Length = 169

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 30/37 (81%), Positives = 34/37 (91%)
 Frame = +3

Query: 639 AAVPKGKMAVYVGQNDGDFERVLVPVLYINHPLFGQL 749
           AAVPKG +AVYVGQNDG+F RVLVPV+Y NHPLFG+L
Sbjct: 82  AAVPKGHLAVYVGQNDGEFHRVLVPVIYFNHPLFGEL 118


Top