BLASTX nr result

ID: Atractylodes22_contig00019798 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00019798
         (870 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|2...    66   1e-08
ref|XP_002331320.1| f-box family protein [Populus trichocarpa] g...    62   2e-07
ref|XP_002331319.1| f-box family protein [Populus trichocarpa] g...    60   5e-07

>ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|222873904|gb|EEF11035.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 57/202 (28%), Positives = 91/202 (45%), Gaps = 19/202 (9%)
 Frame = -1

Query: 867 VFSKCVNLKNLTLERFLVKGVEVFDIISPQLSNLTLVHGFCSKVINLIAPQLENLTAIDC 688
           +FS C NL+NLT+E   +  +E F+I +  L +L +++   S+++               
Sbjct: 188 IFSSCPNLENLTIEDICLNTIENFNIHALNLKSLEILNWRYSRIMR-------------- 233

Query: 687 SIKYLNAPPGLSSLCYRGDNPPQLSNDRFHSLNKVAV-----FYR-SYMRYKEED----- 541
             K +   P L+S  + G+ P   S     SL+ V V     +YR  Y  Y +ED     
Sbjct: 234 GCKVMLFAPKLTSFKFDGNTPLFWSEVNLTSLDDVNVVLQRYYYRHDYQFYVDEDEYISG 293

Query: 540 --------ARKTINMLQQLHSARFLTLNADIVECISSFPDLLSHLPSPFSNLICLNIDSS 385
                       + ML Q  SA+ LTL+ +I+E +S  P  L+  PSPFSNL  L     
Sbjct: 294 EDETKQGFCLDLLKMLHQFCSAKSLTLSMNIIEVLSKVPAALNKHPSPFSNLKYL----K 349

Query: 384 MRKDAYKIKMLPQARNFLLENS 319
           ++ D   + +     N+ L +S
Sbjct: 350 LKTDHKDVTLPAHVLNYFLSSS 371


>ref|XP_002331320.1| f-box family protein [Populus trichocarpa]
           gi|222873903|gb|EEF11034.1| f-box family protein
           [Populus trichocarpa]
          Length = 453

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 56/213 (26%), Positives = 93/213 (43%), Gaps = 22/213 (10%)
 Frame = -1

Query: 867 VFSKCVNLKNLTLERFLVKGVEVFDIISPQLSNLTLVHGFCSKVINLIAPQLENLTAIDC 688
           +FS C NL+NLT+E   +  +E F+I +  L +L +++   +++                
Sbjct: 207 IFSSCPNLENLTIEDICLNVIENFNIHALSLKSLEILNWRYNRIKQ-------------- 252

Query: 687 SIKYLNAPPGLSSLCYRGDNPPQLSNDRFHSLNKVAVFYRSYMR-------------YKE 547
             K +   P L+S  + G+ P   S+    SL+ V V  + Y                 E
Sbjct: 253 GCKVMLVAPKLTSFKFDGNTPLFWSDVNLTSLDDVNVVLQRYHHSHNYPFYVVEDEYISE 312

Query: 546 EDARKT------INMLQQLHSARFLTLNADIVECISSFPDLLSHLPSPFSNLICLNIDSS 385
           ED  +       I ML Q  SA+ LTL+ +I+E +S  P  L   PSPFSNL  L + + 
Sbjct: 313 EDETEQGLGLNLIKMLHQFCSAKSLTLSMNIIEILSEVPAALDKHPSPFSNLKYLKLKTD 372

Query: 384 MRK---DAYKIKMLPQARNFLLENSPSATLIME 295
            +     A+ +    ++ +FL   +  A  + E
Sbjct: 373 HKDVTLPAHVLNYFLRSASFLKAQTHEAVKLFE 405


>ref|XP_002331319.1| f-box family protein [Populus trichocarpa]
           gi|222873902|gb|EEF11033.1| f-box family protein
           [Populus trichocarpa]
          Length = 453

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 55/213 (25%), Positives = 91/213 (42%), Gaps = 22/213 (10%)
 Frame = -1

Query: 867 VFSKCVNLKNLTLERFLVKGVEVFDIISPQLSNLTLVHGFCSKVINLIAPQLENLTAIDC 688
           +FS C NL+NL +E   +  +E F+I +  L +L +++    +++               
Sbjct: 207 IFSTCPNLENLKIEDIYLNTIENFNIHALNLKSLEILNWRYGRIMR-------------- 252

Query: 687 SIKYLNAPPGLSSLCYRGDNPPQLSNDRFHSLNKVAVFYRSYMR-------------YKE 547
             K +   P L+S  + G+ P   S     SL+ V V  + Y                 E
Sbjct: 253 GCKVMLFAPKLTSFKFYGNTPLFWSEVNLTSLDDVNVVLQRYQHSHNYPFYVVEDEYISE 312

Query: 546 EDARKT------INMLQQLHSARFLTLNADIVECISSFPDLLSHLPSPFSNLICLNIDSS 385
           ED  +       I ML Q  SA+ LTL+ +I+E +S  P  L   PSPFSNL  L + + 
Sbjct: 313 EDETEQGLGLNLIKMLHQFCSAKSLTLSMNIIEILSEVPAALDKHPSPFSNLKYLKLKTD 372

Query: 384 MRK---DAYKIKMLPQARNFLLENSPSATLIME 295
            +     A+ +    ++ +FL   +  A  + E
Sbjct: 373 HKDVTLPAHVLNYFLRSASFLKAQTHEAVKLFE 405


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