BLASTX nr result

ID: Atractylodes22_contig00019764 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00019764
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514651.1| replication factor A 1, rfa1, putative [Rici...   104   6e-21
ref|XP_002328669.1| predicted protein [Populus trichocarpa] gi|2...    97   9e-19
ref|XP_003524615.1| PREDICTED: replication protein A 70 kDa DNA-...    96   3e-18
emb|CBI15109.3| unnamed protein product [Vitis vinifera]               95   5e-18
ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-...    95   5e-18

>ref|XP_002514651.1| replication factor A 1, rfa1, putative [Ricinus communis]
           gi|223546255|gb|EEF47757.1| replication factor A 1,
           rfa1, putative [Ricinus communis]
          Length = 622

 Score =  104 bits (260), Expect = 6e-21
 Identities = 53/81 (65%), Positives = 65/81 (80%)
 Frame = +3

Query: 114 KKTVVVSLWNVLATDLGQKLLDMADESPIVAIKSLRVSDFQGNNI*ICFFASGVSLSTLG 293
           KKTVVVSLWN LATD+GQ+LLDMAD+SP+VAIK+L+V DFQ           GVSLSTLG
Sbjct: 348 KKTVVVSLWNDLATDVGQELLDMADKSPVVAIKALKVGDFQ-----------GVSLSTLG 396

Query: 294 KSIVEINPDIPASQKLRSW*D 356
           +SI+++NPD P S+KL+SW D
Sbjct: 397 RSIIQVNPDTPESKKLKSWFD 417


>ref|XP_002328669.1| predicted protein [Populus trichocarpa] gi|222838845|gb|EEE77196.1|
           predicted protein [Populus trichocarpa]
          Length = 603

 Score = 96.7 bits (239), Expect(2) = 9e-19
 Identities = 51/81 (62%), Positives = 62/81 (76%)
 Frame = +3

Query: 114 KKTVVVSLWNVLATDLGQKLLDMADESPIVAIKSLRVSDFQGNNI*ICFFASGVSLSTLG 293
           KKTVVVSLWN LAT +GQ+L D+AD+SP+VAIKSL+V DFQ           G+SLSTLG
Sbjct: 329 KKTVVVSLWNELATSVGQELHDIADKSPVVAIKSLKVGDFQ-----------GISLSTLG 377

Query: 294 KSIVEINPDIPASQKLRSW*D 356
           KSIV++NP I  S+KLR+W D
Sbjct: 378 KSIVQVNPVIAESEKLRNWYD 398



 Score = 21.6 bits (44), Expect(2) = 9e-19
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +2

Query: 416 LVHMYCSEGKETSM 457
           L + Y SEGKETSM
Sbjct: 393 LRNWYDSEGKETSM 406


>ref|XP_003524615.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Glycine max]
          Length = 620

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 49/81 (60%), Positives = 61/81 (75%)
 Frame = +3

Query: 114 KKTVVVSLWNVLATDLGQKLLDMADESPIVAIKSLRVSDFQGNNI*ICFFASGVSLSTLG 293
           KKTVVVSLWN LAT  G++LLD+ D+SP+VAIKSL+V DFQ           GVSLST+G
Sbjct: 347 KKTVVVSLWNELATTTGEELLDIVDKSPVVAIKSLKVGDFQ-----------GVSLSTIG 395

Query: 294 KSIVEINPDIPASQKLRSW*D 356
           +S+V +NPDIP ++ LRSW D
Sbjct: 396 RSVVLVNPDIPEAKNLRSWYD 416


>emb|CBI15109.3| unnamed protein product [Vitis vinifera]
          Length = 602

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 53/81 (65%), Positives = 60/81 (74%)
 Frame = +3

Query: 114 KKTVVVSLWNVLATDLGQKLLDMADESPIVAIKSLRVSDFQGNNI*ICFFASGVSLSTLG 293
           KKTVVVSLWN  AT++GQ+LLD AD+ PIVAIKSL+V DFQ           GVSLSTL 
Sbjct: 327 KKTVVVSLWNDHATNVGQELLDNADKFPIVAIKSLKVGDFQ-----------GVSLSTLS 375

Query: 294 KSIVEINPDIPASQKLRSW*D 356
           KSIV +NPD P S+KLRSW D
Sbjct: 376 KSIVLVNPDTPESKKLRSWYD 396


>ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit isoform
           1 [Vitis vinifera]
          Length = 625

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 53/81 (65%), Positives = 60/81 (74%)
 Frame = +3

Query: 114 KKTVVVSLWNVLATDLGQKLLDMADESPIVAIKSLRVSDFQGNNI*ICFFASGVSLSTLG 293
           KKTVVVSLWN  AT++GQ+LLD AD+ PIVAIKSL+V DFQ           GVSLSTL 
Sbjct: 350 KKTVVVSLWNDHATNVGQELLDNADKFPIVAIKSLKVGDFQ-----------GVSLSTLS 398

Query: 294 KSIVEINPDIPASQKLRSW*D 356
           KSIV +NPD P S+KLRSW D
Sbjct: 399 KSIVLVNPDTPESKKLRSWYD 419