BLASTX nr result
ID: Atractylodes22_contig00019764
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes22_contig00019764 (457 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002514651.1| replication factor A 1, rfa1, putative [Rici... 104 6e-21 ref|XP_002328669.1| predicted protein [Populus trichocarpa] gi|2... 97 9e-19 ref|XP_003524615.1| PREDICTED: replication protein A 70 kDa DNA-... 96 3e-18 emb|CBI15109.3| unnamed protein product [Vitis vinifera] 95 5e-18 ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-... 95 5e-18 >ref|XP_002514651.1| replication factor A 1, rfa1, putative [Ricinus communis] gi|223546255|gb|EEF47757.1| replication factor A 1, rfa1, putative [Ricinus communis] Length = 622 Score = 104 bits (260), Expect = 6e-21 Identities = 53/81 (65%), Positives = 65/81 (80%) Frame = +3 Query: 114 KKTVVVSLWNVLATDLGQKLLDMADESPIVAIKSLRVSDFQGNNI*ICFFASGVSLSTLG 293 KKTVVVSLWN LATD+GQ+LLDMAD+SP+VAIK+L+V DFQ GVSLSTLG Sbjct: 348 KKTVVVSLWNDLATDVGQELLDMADKSPVVAIKALKVGDFQ-----------GVSLSTLG 396 Query: 294 KSIVEINPDIPASQKLRSW*D 356 +SI+++NPD P S+KL+SW D Sbjct: 397 RSIIQVNPDTPESKKLKSWFD 417 >ref|XP_002328669.1| predicted protein [Populus trichocarpa] gi|222838845|gb|EEE77196.1| predicted protein [Populus trichocarpa] Length = 603 Score = 96.7 bits (239), Expect(2) = 9e-19 Identities = 51/81 (62%), Positives = 62/81 (76%) Frame = +3 Query: 114 KKTVVVSLWNVLATDLGQKLLDMADESPIVAIKSLRVSDFQGNNI*ICFFASGVSLSTLG 293 KKTVVVSLWN LAT +GQ+L D+AD+SP+VAIKSL+V DFQ G+SLSTLG Sbjct: 329 KKTVVVSLWNELATSVGQELHDIADKSPVVAIKSLKVGDFQ-----------GISLSTLG 377 Query: 294 KSIVEINPDIPASQKLRSW*D 356 KSIV++NP I S+KLR+W D Sbjct: 378 KSIVQVNPVIAESEKLRNWYD 398 Score = 21.6 bits (44), Expect(2) = 9e-19 Identities = 10/14 (71%), Positives = 11/14 (78%) Frame = +2 Query: 416 LVHMYCSEGKETSM 457 L + Y SEGKETSM Sbjct: 393 LRNWYDSEGKETSM 406 >ref|XP_003524615.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like [Glycine max] Length = 620 Score = 95.9 bits (237), Expect = 3e-18 Identities = 49/81 (60%), Positives = 61/81 (75%) Frame = +3 Query: 114 KKTVVVSLWNVLATDLGQKLLDMADESPIVAIKSLRVSDFQGNNI*ICFFASGVSLSTLG 293 KKTVVVSLWN LAT G++LLD+ D+SP+VAIKSL+V DFQ GVSLST+G Sbjct: 347 KKTVVVSLWNELATTTGEELLDIVDKSPVVAIKSLKVGDFQ-----------GVSLSTIG 395 Query: 294 KSIVEINPDIPASQKLRSW*D 356 +S+V +NPDIP ++ LRSW D Sbjct: 396 RSVVLVNPDIPEAKNLRSWYD 416 >emb|CBI15109.3| unnamed protein product [Vitis vinifera] Length = 602 Score = 95.1 bits (235), Expect = 5e-18 Identities = 53/81 (65%), Positives = 60/81 (74%) Frame = +3 Query: 114 KKTVVVSLWNVLATDLGQKLLDMADESPIVAIKSLRVSDFQGNNI*ICFFASGVSLSTLG 293 KKTVVVSLWN AT++GQ+LLD AD+ PIVAIKSL+V DFQ GVSLSTL Sbjct: 327 KKTVVVSLWNDHATNVGQELLDNADKFPIVAIKSLKVGDFQ-----------GVSLSTLS 375 Query: 294 KSIVEINPDIPASQKLRSW*D 356 KSIV +NPD P S+KLRSW D Sbjct: 376 KSIVLVNPDTPESKKLRSWYD 396 >ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit isoform 1 [Vitis vinifera] Length = 625 Score = 95.1 bits (235), Expect = 5e-18 Identities = 53/81 (65%), Positives = 60/81 (74%) Frame = +3 Query: 114 KKTVVVSLWNVLATDLGQKLLDMADESPIVAIKSLRVSDFQGNNI*ICFFASGVSLSTLG 293 KKTVVVSLWN AT++GQ+LLD AD+ PIVAIKSL+V DFQ GVSLSTL Sbjct: 350 KKTVVVSLWNDHATNVGQELLDNADKFPIVAIKSLKVGDFQ-----------GVSLSTLS 398 Query: 294 KSIVEINPDIPASQKLRSW*D 356 KSIV +NPD P S+KLRSW D Sbjct: 399 KSIVLVNPDTPESKKLRSWYD 419