BLASTX nr result

ID: Atractylodes22_contig00019757 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00019757
         (809 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135585.1| PREDICTED: F-box protein PP2-B15-like [Cucum...    42   2e-06
ref|XP_002270262.1| PREDICTED: putative F-box protein PP2-B2 iso...    43   9e-06
ref|XP_002270223.1| PREDICTED: putative F-box protein PP2-B2 iso...    43   9e-06

>ref|XP_004135585.1| PREDICTED: F-box protein PP2-B15-like [Cucumis sativus]
           gi|449485647|ref|XP_004157234.1| PREDICTED: F-box
           protein PP2-B15-like [Cucumis sativus]
          Length = 270

 Score = 41.6 bits (96), Expect(2) = 2e-06
 Identities = 18/36 (50%), Positives = 25/36 (69%)
 Frame = +3

Query: 159 MDEDVYWEKKLPNDYQQCIEASDNPLNYTSKKELYF 266
           +D DV WEK LP D ++ +   D+P+ Y +KKELYF
Sbjct: 37  VDSDVVWEKFLPFDCKKVLLRLDSPIVYATKKELYF 72



 Score = 36.2 bits (82), Expect(2) = 2e-06
 Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
 Frame = +1

Query: 385 FSLCKSTDGICSMLSASEILIGDSN---YKDLITLSLVESRFSEVKKLPDTNWYRFVCRL 555
           F + K T   C +L A E+ I  SN   Y        ++SRF EV +L    W      +
Sbjct: 87  FYIDKETGKKCYILGARELQIQWSNNPLYWSWNRQPFLKSRFEEVAELRTIWWLEIKGSI 146

Query: 556 RSPMFSPQHIYACYLVFKFPD 618
            + + S + +Y  YL+ KF D
Sbjct: 147 NTKLLSSKTLYFAYLLVKFAD 167


>ref|XP_002270262.1| PREDICTED: putative F-box protein PP2-B2 isoform 2 [Vitis vinifera]
          Length = 294

 Score = 42.7 bits (99), Expect(2) = 9e-06
 Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
 Frame = +1

Query: 385 FSLCKSTDGICSMLSASEI-LIGDSNYKDLITLSLVESRFSEVKKLPDTNWYRFVCRLRS 561
           F L K +   C MLSA ++ +I  S  +     S+ ESRFSE+  L D  W      + +
Sbjct: 111 FWLEKRSGKKCFMLSARDLAIIWGSTPRYWRWFSVPESRFSEIAYLNDVCWLEVKGVINA 170

Query: 562 PMFSPQHIYACYLVFKFPDN 621
            M SP+  YA YLVF    N
Sbjct: 171 CMLSPRTNYAAYLVFNLKTN 190



 Score = 33.1 bits (74), Expect(2) = 9e-06
 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
 Frame = +3

Query: 159 MDEDVYWEKKLPNDYQQCIEASDNP---LNYTSKKELYF 266
           ++ D  W + LP+DYQQ +  S  P    + +SKKEL+F
Sbjct: 57  VESDALWLRFLPDDYQQILARSAEPPSLSDSSSKKELFF 95


>ref|XP_002270223.1| PREDICTED: putative F-box protein PP2-B2 isoform 1 [Vitis vinifera]
          Length = 287

 Score = 42.7 bits (99), Expect(2) = 9e-06
 Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
 Frame = +1

Query: 385 FSLCKSTDGICSMLSASEI-LIGDSNYKDLITLSLVESRFSEVKKLPDTNWYRFVCRLRS 561
           F L K +   C MLSA ++ +I  S  +     S+ ESRFSE+  L D  W      + +
Sbjct: 111 FWLEKRSGKKCFMLSARDLAIIWGSTPRYWRWFSVPESRFSEIAYLNDVCWLEVKGVINA 170

Query: 562 PMFSPQHIYACYLVFKFPDN 621
            M SP+  YA YLVF    N
Sbjct: 171 CMLSPRTNYAAYLVFNLKTN 190



 Score = 33.1 bits (74), Expect(2) = 9e-06
 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
 Frame = +3

Query: 159 MDEDVYWEKKLPNDYQQCIEASDNP---LNYTSKKELYF 266
           ++ D  W + LP+DYQQ +  S  P    + +SKKEL+F
Sbjct: 57  VESDALWLRFLPDDYQQILARSAEPPSLSDSSSKKELFF 95


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