BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00019740
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003615969.1| Pseudouridylate synthase [Medicago truncatul...    85   5e-15
ref|XP_002881100.1| tRNA pseudouridine synthase family protein [...    77   1e-12
ref|NP_180591.1| putative tRNA pseudouridine synthase [Arabidops...    76   2e-12
ref|XP_002517734.1| pseudouridylate synthase, putative [Ricinus ...    76   3e-12
ref|XP_004145230.1| PREDICTED: putative tRNA pseudouridine synth...    75   6e-12

>ref|XP_003615969.1| Pseudouridylate synthase [Medicago truncatula]
           gi|355517304|gb|AES98927.1| Pseudouridylate synthase
           [Medicago truncatula]
          Length = 483

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 53/112 (47%), Positives = 66/112 (58%), Gaps = 12/112 (10%)
 Frame = -3

Query: 304 CSCSSYPQSTTSLETLPHLPPNHSVNHTTLERWVPHRKRKVLMRVGHAGIDFRAMK---- 137
           C CSS   STT  ++LP LPP         E+WVP+ K+KV+MRVG+ G DFR ++    
Sbjct: 33  CFCSS---STT--DSLPSLPP---------EKWVPYLKKKVVMRVGYIGTDFRGLQIQRN 78

Query: 136 --------KELEIAIYKAGGIHESNFRDPLKNSWATSSLIHDEVHSLSTMIS 5
                   KELE AI+K GGI +SN+ D  K +W  SS     VHSLSTMIS
Sbjct: 79  DHKLSTIEKELETAIFKVGGIRDSNYGDLDKINWGRSSRTDKGVHSLSTMIS 130


>ref|XP_002881100.1| tRNA pseudouridine synthase family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297326939|gb|EFH57359.1| tRNA
           pseudouridine synthase family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 507

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 50/138 (36%), Positives = 77/138 (55%), Gaps = 18/138 (13%)
 Frame = -3

Query: 361 KLLLSSPIYGNGTKSIRI------LCSCSSYPQSTTSLETLPHLPPNHSVNHTTLERWVP 200
           ++ + S ++   T+ IR+      L S +++  S+TSL       P+ S N    ++W  
Sbjct: 7   RIPIPSRVFWYPTRLIRVTPALVRLSSSAAFQPSSTSLS------PSSSDNFLA-DKWES 59

Query: 199 HRKRKVLMRVGHAGIDFRAMK------------KELEIAIYKAGGIHESNFRDPLKNSWA 56
           +RK+KV++R+G+ G D+R ++             ELE+AIYKAGGI +SN+ D  K  WA
Sbjct: 60  YRKKKVVIRIGYVGTDYRGLQIQRDDPSLKTIEGELEVAIYKAGGIRDSNYGDLHKIGWA 119

Query: 55  TSSLIHDEVHSLSTMISL 2
            SS     VHSL+T ISL
Sbjct: 120 RSSRTDKGVHSLATSISL 137


>ref|NP_180591.1| putative tRNA pseudouridine synthase [Arabidopsis thaliana]
           gi|3914486|sp|O22928.1|PUSH_ARATH RecName: Full=Putative
           tRNA pseudouridine synthase; AltName: Full=tRNA
           pseudouridylate synthase; AltName: Full=tRNA-uridine
           isomerase gi|2347206|gb|AAC16945.1| putative
           pseudouridine synthase [Arabidopsis thaliana]
           gi|330253276|gb|AEC08370.1| putative tRNA pseudouridine
           synthase [Arabidopsis thaliana]
          Length = 510

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 46/132 (34%), Positives = 71/132 (53%), Gaps = 12/132 (9%)
 Frame = -3

Query: 361 KLLLSSPIYGNGTKSIRILCSCSSYPQSTTSLETLPHLPPNHSVNHTTLERWVPHRKRKV 182
           ++ + S ++   T+ IR+  +   +  S     +   L P  S N    ++W  +RK+KV
Sbjct: 7   RIPIPSRVFWYPTRLIRVTPALLRFSSSAAFQPSSTSLSPPSSDNFLA-DKWESYRKKKV 65

Query: 181 LMRVGHAGIDFRAMK------------KELEIAIYKAGGIHESNFRDPLKNSWATSSLIH 38
           ++R+G+ G D+R ++             ELE+AIYKAGGI +SN+ D  K  WA SS   
Sbjct: 66  VIRIGYVGTDYRGLQIQRDDPSIKTIEGELEVAIYKAGGIRDSNYGDLHKIGWARSSRTD 125

Query: 37  DEVHSLSTMISL 2
             VHSL+T ISL
Sbjct: 126 KGVHSLATSISL 137


>ref|XP_002517734.1| pseudouridylate synthase, putative [Ricinus communis]
           gi|223543132|gb|EEF44666.1| pseudouridylate synthase,
           putative [Ricinus communis]
          Length = 377

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 42/98 (42%), Positives = 59/98 (60%), Gaps = 12/98 (12%)
 Frame = -3

Query: 259 LPHLPPNHSVNHTTLERWVPHRKRKVLMRVGHAGIDFRAMKK------------ELEIAI 116
           LP    + S  H   ++W P RK+KV++RVG+ G D+R ++K            ELE AI
Sbjct: 31  LPSRLSSQSHAHILSQKWEPFRKKKVVLRVGYVGTDYRGLQKQEDEHSLSTIEAELECAI 90

Query: 115 YKAGGIHESNFRDPLKNSWATSSLIHDEVHSLSTMISL 2
           +KAGGI +SN+ +  K +WA SS     VHSL+TMIS+
Sbjct: 91  FKAGGILDSNYGNLHKIAWARSSRTDKGVHSLATMISM 128


>ref|XP_004145230.1| PREDICTED: putative tRNA pseudouridine synthase-like [Cucumis
           sativus]
          Length = 507

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 53/154 (34%), Positives = 81/154 (52%), Gaps = 14/154 (9%)
 Frame = -3

Query: 421 MATSTPLFSLSPLVHRQTASKLLLSSPIYGNGTKSIR--ILCSCSSYPQSTTSLETLPHL 248
           M+ S+    LSP + + ++S      P++ + T  +R  +L   SS   ST +  T    
Sbjct: 1   MSVSSLRLPLSPWITKASSSCFRFPDPVFVSRTPPLRPALLHFFSSSTASTDAFST--RC 58

Query: 247 PPNHSVNHTTLERWVPHRKRKVLMRVGHAGIDFRAMK------------KELEIAIYKAG 104
            P+       L +W   RK+KV++R+G+ G D+R ++            +ELE AIYKAG
Sbjct: 59  APDQ------LRKWQAFRKKKVVLRIGYVGTDYRGLQMQRNQLSHPTIEQELEDAIYKAG 112

Query: 103 GIHESNFRDPLKNSWATSSLIHDEVHSLSTMISL 2
           GI +SN+ +  K SWA SS     VHSL+T I+L
Sbjct: 113 GICDSNYGNLNKISWARSSRTDKGVHSLATTITL 146