BLASTX nr result

ID: Atractylodes22_contig00019664 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00019664
         (852 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529477.1| RNA recognition motif-containing protein, pu...    69   1e-09

>ref|XP_002529477.1| RNA recognition motif-containing protein, putative [Ricinus communis]
            gi|223531035|gb|EEF32887.1| RNA recognition
            motif-containing protein, putative [Ricinus communis]
          Length = 902

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 59/162 (36%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
 Frame = +1

Query: 10   QAYPSNTVSDPN---LTVTQKSHVQGLSFNLPHHEAVASMTSSSCQTP-QGVQFALPMQA 177
            Q YPS + S PN   + V   + +Q  S NLPH   +AS   +S   P QG Q ALP   
Sbjct: 718  QPYPSIS-SAPNSSEIMVPGTAQIQDFSVNLPHQGGIASRPLNSVNLPSQGGQVALPPHV 776

Query: 178  SQQYQLD------YSQDMHTVSGLEQNADAPSMIHPGVNAVTSSSHVYGTNVYEPQSVVP 339
            SQQYQL+      YS  MH   G    + +PS+I    N V  SS   G N  + QS +P
Sbjct: 777  SQQYQLEVPHQKAYSGMMHGTEG----SYSPSVIQQSNNPVVFSSQAQGGNHSQTQSGLP 832

Query: 340  AGVGNSGXXXXXXXXXXXSALCGASQQTLNFDADKDERYQST 465
                +S            +A   A Q T   + DK++RYQST
Sbjct: 833  L---SSDKVNWEVSSQLQTAPFVADQGTSEVEVDKNQRYQST 871


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