BLASTX nr result

ID: Atractylodes22_contig00019663 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00019663
         (668 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277913.1| PREDICTED: zinc finger CCCH domain-containin...    78   1e-12
ref|XP_002510504.1| nucleic acid binding protein, putative [Rici...    77   4e-12
ref|XP_002306911.1| predicted protein [Populus trichocarpa] gi|2...    69   1e-09
gb|AAO14624.2|AF467900_1 hypothetical protein [Prunus persica]         67   4e-09
ref|XP_003523552.1| PREDICTED: zinc finger CCCH domain-containin...    65   1e-08

>ref|XP_002277913.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like [Vitis
           vinifera]
          Length = 457

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 45/103 (43%), Positives = 66/103 (64%), Gaps = 7/103 (6%)
 Frame = -3

Query: 624 PTTMASHSGNGMLPP-------GMVSGVEPGVVSAAYSALNSAMSNNSQGNLIDSNLLMK 466
           P+  +S++ N   PP       GMV GVEP VV+AA +A  + M +N QGNLID +LL+K
Sbjct: 193 PSASSSNAPNIPNPPANENVAAGMVPGVEPDVVAAASAAFTAVMRSNEQGNLIDHDLLIK 252

Query: 465 ILSNPALIEKLVSTHGPSTSGQQISQSLSNPTLPGISIAEPPP 337
           ILSNP +IE++V+    S+S     Q++ N  LP I++++ PP
Sbjct: 253 ILSNPKIIERIVTDQVVSSSN---PQAVPNQRLPPIALSDQPP 292


>ref|XP_002510504.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223551205|gb|EEF52691.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 461

 Score = 76.6 bits (187), Expect = 4e-12
 Identities = 41/89 (46%), Positives = 60/89 (67%)
 Frame = -3

Query: 594 GMLPPGMVSGVEPGVVSAAYSALNSAMSNNSQGNLIDSNLLMKILSNPALIEKLVSTHGP 415
           G+LP   V GVEP VV+AA +A  +   +N QG+LID +LL+KIL+NP LIEKLV  +G 
Sbjct: 216 GVLP---VPGVEPDVVAAASAAFAAVNKSNEQGSLIDHDLLIKILNNPKLIEKLVQDYGA 272

Query: 414 STSGQQISQSLSNPTLPGISIAEPPPPVP 328
           +++GQ + +    P    + +++PPPP P
Sbjct: 273 ASNGQNVPK----PAPSFVPLSDPPPPPP 297


>ref|XP_002306911.1| predicted protein [Populus trichocarpa] gi|222856360|gb|EEE93907.1|
           predicted protein [Populus trichocarpa]
          Length = 398

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 43/114 (37%), Positives = 64/114 (56%), Gaps = 5/114 (4%)
 Frame = -3

Query: 666 PDTSSVASNTSLQAPTTMASHSGNGMLP-----PGMVSGVEPGVVSAAYSALNSAMSNNS 502
           P    ++S   L A    +S S    +P      G++ GVEPG V+AA SA  +A+ +N 
Sbjct: 151 PSMGPMSSQAQLLASGVPSSQSSIPSIPNEKPTAGLLPGVEPGAVAAA-SAAFAAVKSNE 209

Query: 501 QGNLIDSNLLMKILSNPALIEKLVSTHGPSTSGQQISQSLSNPTLPGISIAEPP 340
           QG+LID +LL+KILSNP L+EKLV+ +G   + Q I +     ++   S+   P
Sbjct: 210 QGSLIDHDLLIKILSNPKLVEKLVTDYGAVANAQNIPKPPLAESITQASLTATP 263


>gb|AAO14624.2|AF467900_1 hypothetical protein [Prunus persica]
          Length = 441

 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 43/113 (38%), Positives = 59/113 (52%), Gaps = 5/113 (4%)
 Frame = -3

Query: 660 TSSVASNTSLQAPTTMA-----SHSGNGMLPPGMVSGVEPGVVSAAYSALNSAMSNNSQG 496
           T S  S   + AP+        +H  +     G+  GVEP VV+AA +A  + +++N  G
Sbjct: 180 TQSFLSVQGIAAPSQSVVPNNRNHPTSNKPVAGIPVGVEPDVVAAASAAFGAIVNSNEHG 239

Query: 495 NLIDSNLLMKILSNPALIEKLVSTHGPSTSGQQISQSLSNPTLPGISIAEPPP 337
           N+ID  LL+KILSNP +IEKLV    P T              P +SIA+PPP
Sbjct: 240 NMIDHELLIKILSNPKMIEKLVKDPQPMTRP------------PQMSIADPPP 280


>ref|XP_003523552.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like
           [Glycine max]
          Length = 430

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 52/191 (27%), Positives = 76/191 (39%)
 Frame = -3

Query: 651 VASNTSLQAPTTMASHSGNGMLPPGMVSGVEPGVVSAAYSALNSAMSNNSQGNLIDSNLL 472
           V+ +  L +     S+S   M    +  G+   V  AA  AL + + +N  GN +D  LL
Sbjct: 176 VSQSLQLASGVLKDSNSATSMQ---LACGLASDVAVAASVALTNLVKSNEHGNFVDHELL 232

Query: 471 MKILSNPALIEKLVSTHGPSTSGQQISQSLSNPTLPGISIAEPPPPVPGQTTHQXXXXXX 292
             IL+NP +IEKLV  +G   + Q +  + S+      + + PP P+ GQTT        
Sbjct: 233 NNILNNPEVIEKLVGDYGAINNSQYVHNAGSSLA----AFSNPPIPIQGQTTTPSSVVFS 288

Query: 291 XXXXXXXXXXSRMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGLSSMGAAPAKKDIN 112
                      +                                  +SS    P  +D+N
Sbjct: 289 TTSSYTPPIGGQAEPVTTQWPPRPAVSSAI----------------VSSPIEVPPARDVN 332

Query: 111 YYKSLIQQHGG 79
           YYKSLIQQHGG
Sbjct: 333 YYKSLIQQHGG 343


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