BLASTX nr result

ID: Atractylodes22_contig00019593 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00019593
         (665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302632.1| predicted protein [Populus trichocarpa] gi|1...   303   3e-80
ref|XP_002267317.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...   300   1e-79
ref|XP_002320867.1| predicted protein [Populus trichocarpa] gi|2...   300   2e-79
ref|XP_003588519.1| Ubiquitin ligase SINAT3 [Medicago truncatula...   300   2e-79
emb|CCG06554.1| E3 ubiquitin ligase [Lotus japonicus]                 298   5e-79

>ref|XP_002302632.1| predicted protein [Populus trichocarpa] gi|118486216|gb|ABK94950.1|
           unknown [Populus trichocarpa]
           gi|222844358|gb|EEE81905.1| predicted protein [Populus
           trichocarpa]
          Length = 330

 Score =  303 bits (775), Expect = 3e-80
 Identities = 139/147 (94%), Positives = 145/147 (98%)
 Frame = +3

Query: 3   KVDMHTGCTFNHRYVKSNPREVENATWMLTVFNCFGEYFCLHFEAFQLGMAPVYMAFVRF 182
           KVDMH+GCTFNHRYVKSNPREVENATWMLTVF+CFG+YFCLHFEAFQLGMAPVYMAF+RF
Sbjct: 181 KVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRF 240

Query: 183 MGDEVEARNYSYSLEVGGNGRKLMWEGTPRSIRDSHRKVKDSHDGLIIQRNMALFFSGGD 362
           MGDE EARNYSYSLEVGGNGRKL+WEGTPRSIRDSHRKV+DSHDGLIIQRNMALFFSGGD
Sbjct: 241 MGDEAEARNYSYSLEVGGNGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGD 300

Query: 363 RKELKLRVTGRIWKEQQNPEGGVCIPN 443
           RKELKLRVTGRIWKEQQNPEGG CIPN
Sbjct: 301 RKELKLRVTGRIWKEQQNPEGGACIPN 327


>ref|XP_002267317.1| PREDICTED: E3 ubiquitin-protein ligase SINAT5 [Vitis vinifera]
           gi|297742353|emb|CBI34502.3| unnamed protein product
           [Vitis vinifera]
          Length = 316

 Score =  300 bits (769), Expect = 1e-79
 Identities = 137/147 (93%), Positives = 145/147 (98%)
 Frame = +3

Query: 3   KVDMHTGCTFNHRYVKSNPREVENATWMLTVFNCFGEYFCLHFEAFQLGMAPVYMAFVRF 182
           KVDMHTGCTFNHRYVKSNPREVENATWMLTVFNCFG+YFCLHFEAFQLGMAPVYMAF+RF
Sbjct: 167 KVDMHTGCTFNHRYVKSNPREVENATWMLTVFNCFGQYFCLHFEAFQLGMAPVYMAFLRF 226

Query: 183 MGDEVEARNYSYSLEVGGNGRKLMWEGTPRSIRDSHRKVKDSHDGLIIQRNMALFFSGGD 362
           MGDE+EARN+SYSLEVG NGRKL+WEGTPRSIRDSH+KV+DSHDGLIIQRNMALFFSGGD
Sbjct: 227 MGDEIEARNFSYSLEVGANGRKLIWEGTPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGD 286

Query: 363 RKELKLRVTGRIWKEQQNPEGGVCIPN 443
           RKELKLRVTGRIWKEQQNP+ GVCIPN
Sbjct: 287 RKELKLRVTGRIWKEQQNPDAGVCIPN 313


>ref|XP_002320867.1| predicted protein [Populus trichocarpa] gi|222861640|gb|EEE99182.1|
           predicted protein [Populus trichocarpa]
          Length = 330

 Score =  300 bits (768), Expect = 2e-79
 Identities = 137/147 (93%), Positives = 144/147 (97%)
 Frame = +3

Query: 3   KVDMHTGCTFNHRYVKSNPREVENATWMLTVFNCFGEYFCLHFEAFQLGMAPVYMAFVRF 182
           KVDMH+GCTFNHRYVKSNPREVENATWMLTVF+CFG+YFCLHFEAFQLGMAPVYMAF+RF
Sbjct: 181 KVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRF 240

Query: 183 MGDEVEARNYSYSLEVGGNGRKLMWEGTPRSIRDSHRKVKDSHDGLIIQRNMALFFSGGD 362
           MGDE EARNYSYSLEVGGNGRKL+WEG PRSIRDSHRKV+DSHDGL+IQRNMALFFSGGD
Sbjct: 241 MGDETEARNYSYSLEVGGNGRKLIWEGMPRSIRDSHRKVRDSHDGLVIQRNMALFFSGGD 300

Query: 363 RKELKLRVTGRIWKEQQNPEGGVCIPN 443
           RKELKLRVTGRIWKEQQNPEGG CIPN
Sbjct: 301 RKELKLRVTGRIWKEQQNPEGGACIPN 327


>ref|XP_003588519.1| Ubiquitin ligase SINAT3 [Medicago truncatula]
           gi|158516792|gb|ABW70159.1| SINA1 [Medicago truncatula]
           gi|355477567|gb|AES58770.1| Ubiquitin ligase SINAT3
           [Medicago truncatula]
          Length = 333

 Score =  300 bits (768), Expect = 2e-79
 Identities = 138/147 (93%), Positives = 145/147 (98%)
 Frame = +3

Query: 3   KVDMHTGCTFNHRYVKSNPREVENATWMLTVFNCFGEYFCLHFEAFQLGMAPVYMAFVRF 182
           KVDMHTGCTFNHRYVKSNPREVENATWMLTVF+CFG+YFCLHFEAFQLGMAPVYMAF+RF
Sbjct: 184 KVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRF 243

Query: 183 MGDEVEARNYSYSLEVGGNGRKLMWEGTPRSIRDSHRKVKDSHDGLIIQRNMALFFSGGD 362
           MGDE EARNY+YSLEVG NGRKL+WEGTPRSIRDSHRKV+DSHDGLIIQRNMALFFSGGD
Sbjct: 244 MGDENEARNYTYSLEVGANGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGD 303

Query: 363 RKELKLRVTGRIWKEQQNPEGGVCIPN 443
           RKELKLRVTGRIWKEQQNP+GGVCIPN
Sbjct: 304 RKELKLRVTGRIWKEQQNPDGGVCIPN 330


>emb|CCG06554.1| E3 ubiquitin ligase [Lotus japonicus]
          Length = 324

 Score =  298 bits (764), Expect = 5e-79
 Identities = 137/147 (93%), Positives = 144/147 (97%)
 Frame = +3

Query: 3   KVDMHTGCTFNHRYVKSNPREVENATWMLTVFNCFGEYFCLHFEAFQLGMAPVYMAFVRF 182
           KVDMHTGCTFNHRYVKSNPREVENATWMLTVF+CFG+YFCLHFEAFQLGMAPVYMAF+RF
Sbjct: 175 KVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRF 234

Query: 183 MGDEVEARNYSYSLEVGGNGRKLMWEGTPRSIRDSHRKVKDSHDGLIIQRNMALFFSGGD 362
           MGDE EARNYSYSLEVG NGRKL+WEGTPRS+RDSHRKV+DSHDGLIIQRNMALFFSGGD
Sbjct: 235 MGDENEARNYSYSLEVGANGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGD 294

Query: 363 RKELKLRVTGRIWKEQQNPEGGVCIPN 443
           RKELKLRVTGRIWKEQQNP+ GVCIPN
Sbjct: 295 RKELKLRVTGRIWKEQQNPDAGVCIPN 321


Top