BLASTX nr result

ID: Atractylodes22_contig00019589 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00019589
         (678 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310517.1| predicted protein [Populus trichocarpa] gi|2...   151   1e-34
emb|CBI37530.3| unnamed protein product [Vitis vinifera]              148   8e-34
ref|XP_002274138.1| PREDICTED: probable polygalacturonase [Vitis...   148   8e-34
emb|CAN76963.1| hypothetical protein VITISV_043959 [Vitis vinifera]   148   8e-34
ref|XP_002526639.1| polygalacturonase, putative [Ricinus communi...   148   1e-33

>ref|XP_002310517.1| predicted protein [Populus trichocarpa] gi|222853420|gb|EEE90967.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score =  151 bits (382), Expect = 1e-34
 Identities = 77/110 (70%), Positives = 85/110 (77%), Gaps = 1/110 (0%)
 Frame = +2

Query: 350 SDTGIDLDLSGSDI-CDGSLPARELKMSIVEFGGVGDGVTSNTAAFTEAVRKMKSFEGKG 526
           S TG+  D   S +   G LP R+  MSI EFGGVGDG TSNT  F +A+R ++ F   G
Sbjct: 9   SKTGVSADTRTSCVGFFGELPERKAVMSIREFGGVGDGKTSNTETFRKAIRYLQRFGESG 68

Query: 527 GAQLNVPRGRWVTGSFNLTSNFTLFLEEGAVILGSQDPNEWPIIEPLPSY 676
           GAQLNVP+GRWVTGSFNLTSNFTLFLEEGAVILGSQDP EWPIIEPLPSY
Sbjct: 69  GAQLNVPKGRWVTGSFNLTSNFTLFLEEGAVILGSQDPKEWPIIEPLPSY 118


>emb|CBI37530.3| unnamed protein product [Vitis vinifera]
          Length = 528

 Score =  148 bits (374), Expect = 8e-34
 Identities = 83/145 (57%), Positives = 96/145 (66%), Gaps = 3/145 (2%)
 Frame = +2

Query: 251 KPSWAFPXXXXXXXXXXXXQITTNESGFQERPV---SDTGIDLDLSGSDICDGSLPAREL 421
           +PSWAF             QI T ++ F    V    +TGI  +          +P R++
Sbjct: 17  RPSWAFLLLVFIVLVVSCFQIGT-KTVFPRWVVLGGGETGISEEAPSCFGLFREVPPRKV 75

Query: 422 KMSIVEFGGVGDGVTSNTAAFTEAVRKMKSFEGKGGAQLNVPRGRWVTGSFNLTSNFTLF 601
            MSI +FGGVGDGVTSNT  F  A+R M+SF   GG+QLNVPRGRWVTGSFNLTSNFTLF
Sbjct: 76  VMSIRDFGGVGDGVTSNTETFRRAIRYMQSFGNIGGSQLNVPRGRWVTGSFNLTSNFTLF 135

Query: 602 LEEGAVILGSQDPNEWPIIEPLPSY 676
           LEEGAVILGSQD  +WPIIEPLPSY
Sbjct: 136 LEEGAVILGSQDLEDWPIIEPLPSY 160


>ref|XP_002274138.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
          Length = 488

 Score =  148 bits (374), Expect = 8e-34
 Identities = 83/145 (57%), Positives = 96/145 (66%), Gaps = 3/145 (2%)
 Frame = +2

Query: 251 KPSWAFPXXXXXXXXXXXXQITTNESGFQERPV---SDTGIDLDLSGSDICDGSLPAREL 421
           +PSWAF             QI T ++ F    V    +TGI  +          +P R++
Sbjct: 17  RPSWAFLLLVFIVLVVSCFQIGT-KTVFPRWVVLGGGETGISEEAPSCFGLFREVPPRKV 75

Query: 422 KMSIVEFGGVGDGVTSNTAAFTEAVRKMKSFEGKGGAQLNVPRGRWVTGSFNLTSNFTLF 601
            MSI +FGGVGDGVTSNT  F  A+R M+SF   GG+QLNVPRGRWVTGSFNLTSNFTLF
Sbjct: 76  VMSIRDFGGVGDGVTSNTETFRRAIRYMQSFGNIGGSQLNVPRGRWVTGSFNLTSNFTLF 135

Query: 602 LEEGAVILGSQDPNEWPIIEPLPSY 676
           LEEGAVILGSQD  +WPIIEPLPSY
Sbjct: 136 LEEGAVILGSQDLEDWPIIEPLPSY 160


>emb|CAN76963.1| hypothetical protein VITISV_043959 [Vitis vinifera]
          Length = 479

 Score =  148 bits (374), Expect = 8e-34
 Identities = 83/145 (57%), Positives = 96/145 (66%), Gaps = 3/145 (2%)
 Frame = +2

Query: 251 KPSWAFPXXXXXXXXXXXXQITTNESGFQERPV---SDTGIDLDLSGSDICDGSLPAREL 421
           +PSWAF             QI T ++ F    V    +TGI  +          +P R++
Sbjct: 6   RPSWAFLLLVFIVLVVSCFQIGT-KTVFPRWVVLGGGETGISEEAPSCFGLFREVPPRKV 64

Query: 422 KMSIVEFGGVGDGVTSNTAAFTEAVRKMKSFEGKGGAQLNVPRGRWVTGSFNLTSNFTLF 601
            MSI +FGGVGDGVTSNT  F  A+R M+SF   GG+QLNVPRGRWVTGSFNLTSNFTLF
Sbjct: 65  VMSIRDFGGVGDGVTSNTETFRRAIRYMQSFGNIGGSQLNVPRGRWVTGSFNLTSNFTLF 124

Query: 602 LEEGAVILGSQDPNEWPIIEPLPSY 676
           LEEGAVILGSQD  +WPIIEPLPSY
Sbjct: 125 LEEGAVILGSQDLEDWPIIEPLPSY 149


>ref|XP_002526639.1| polygalacturonase, putative [Ricinus communis]
           gi|223534031|gb|EEF35751.1| polygalacturonase, putative
           [Ricinus communis]
          Length = 480

 Score =  148 bits (373), Expect = 1e-33
 Identities = 72/91 (79%), Positives = 78/91 (85%)
 Frame = +2

Query: 404 LPARELKMSIVEFGGVGDGVTSNTAAFTEAVRKMKSFEGKGGAQLNVPRGRWVTGSFNLT 583
           LP RE+  SIV+FGGVGDG TSNT  F +AVR M+ F  KGG+QL VPRGRW+TGSFNLT
Sbjct: 71  LPRREVVRSIVDFGGVGDGKTSNTETFRKAVRYMQRFAEKGGSQLIVPRGRWLTGSFNLT 130

Query: 584 SNFTLFLEEGAVILGSQDPNEWPIIEPLPSY 676
           SNFTLFLEEGAVILGSQDP EWPIIEPLPSY
Sbjct: 131 SNFTLFLEEGAVILGSQDPKEWPIIEPLPSY 161


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