BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00019548
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    69   6e-10

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 37/114 (32%), Positives = 64/114 (56%)
 Frame = +2

Query: 86  PTQAQRIEQLEEQFASLRSSIXXXXXXXXXXXXXQMQKSLADQIASSLEQMTKKFGEDLT 265
           PT  QR++ LE Q A+L++SI               + ++ADQI+  +E+  KK  EDL 
Sbjct: 4   PTTNQRLDLLEAQMANLQNSIAAQISDSVGLAMEAAKITIADQISQRMEEAMKKSKEDLD 63

Query: 266 TISSRLEGRITKNQEDHESLIAMMKKDQIRLQDEVQSSFRELRGKGPREGKKMQ 427
             + RLEGRI + +E+ E ++ + + DQ + Q EV S+  +L+ +  + G + +
Sbjct: 64  VANFRLEGRIERTRENLEGMLTVARADQNKFQTEVSSALAKLQPEKEKNGNRKE 117