BLASTX nr result

ID: Atractylodes22_contig00019461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00019461
         (1146 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252...   189   1e-45
emb|CAN80359.1| hypothetical protein VITISV_002028 [Vitis vinifera]   189   1e-45
ref|XP_002510115.1| transcription initiation factor, putative [R...   143   7e-32
ref|XP_002520510.1| transcription initiation factor, putative [R...   138   3e-30
ref|XP_002320699.1| predicted protein [Populus trichocarpa] gi|2...   137   4e-30

>ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252311 [Vitis vinifera]
          Length = 922

 Score =  189 bits (479), Expect = 1e-45
 Identities = 114/232 (49%), Positives = 155/232 (66%), Gaps = 12/232 (5%)
 Frame = +3

Query: 486  DLQMRQGAVHPSMGASQVGISTQAMNSINLP--DRQAAFSDMKRMHGGNLTHFPSNSALQ 659
            D QMRQ  +H ++G++Q+G ++QAMN +++P  +RQ++ +D KR+ GG+L H  ++S LQ
Sbjct: 397  DSQMRQVPLHQNIGSTQMGGTSQAMNPMSVPKFERQSSVNDPKRVQGGSLPHPSNSSTLQ 456

Query: 660  QNSGHWQQSMHKDQSLLSSMAYVKPEPVDQMNDQQHRSQLSTLQGPSSFSPGQLEQGSAL 839
            Q+S  WQ S +K+Q  +SSMAYVK EP DQ N+QQ +SQLST Q  SSF   Q+E+G+A+
Sbjct: 457  QSSVPWQSSTNKEQ--ISSMAYVKQEPADQTNEQQQKSQLSTPQSLSSFPAVQVEKGNAI 514

Query: 840  SGFSQDESFEMLSSRPNFSTSMSKPETMSITAQLERQ---NVSAAN--SSLVS--GSNAK 998
             G  +DES E  +SR  FS+SMS     S+++ +      NV+  +   S+ S  G N +
Sbjct: 515  PGILKDESLEKQASRIGFSSSMSMLPPNSVSSSMGTHLDPNVTLGSRIPSVTSPVGINTR 574

Query: 999  TPPKKPSVGQKKPLEA---XXXXXXXXXXXXGAFSDQSIEQLNDVTAVSGVN 1145
            TPPKKPS+GQKKPLEA               GAF DQSIEQLNDVTAVSGVN
Sbjct: 575  TPPKKPSIGQKKPLEALGSSPPLPSKKQKVSGAFLDQSIEQLNDVTAVSGVN 626


>emb|CAN80359.1| hypothetical protein VITISV_002028 [Vitis vinifera]
          Length = 906

 Score =  189 bits (479), Expect = 1e-45
 Identities = 114/232 (49%), Positives = 155/232 (66%), Gaps = 12/232 (5%)
 Frame = +3

Query: 486  DLQMRQGAVHPSMGASQVGISTQAMNSINLP--DRQAAFSDMKRMHGGNLTHFPSNSALQ 659
            D QMRQ  +H ++G++Q+G ++QAMN +++P  +RQ++ +D KR+ GG+L H  ++S LQ
Sbjct: 442  DSQMRQVPLHQNIGSTQMGGTSQAMNPMSVPKFERQSSVNDPKRVQGGSLPHPSNSSTLQ 501

Query: 660  QNSGHWQQSMHKDQSLLSSMAYVKPEPVDQMNDQQHRSQLSTLQGPSSFSPGQLEQGSAL 839
            Q+S  WQ S +K+Q  +SSMAYVK EP DQ N+QQ +SQLST Q  SSF   Q+E+G+A+
Sbjct: 502  QSSVPWQSSTNKEQ--ISSMAYVKQEPADQTNEQQQKSQLSTPQSLSSFPAVQVEKGNAI 559

Query: 840  SGFSQDESFEMLSSRPNFSTSMSKPETMSITAQLERQ---NVSAAN--SSLVS--GSNAK 998
             G  +DES E  +SR  FS+SMS     S+++ +      NV+  +   S+ S  G N +
Sbjct: 560  PGILKDESLEKQASRIGFSSSMSMLPPNSVSSSMGTHLDPNVTLGSRIPSVTSPVGINTR 619

Query: 999  TPPKKPSVGQKKPLEA---XXXXXXXXXXXXGAFSDQSIEQLNDVTAVSGVN 1145
            TPPKKPS+GQKKPLEA               GAF DQSIEQLNDVTAVSGVN
Sbjct: 620  TPPKKPSIGQKKPLEALGSSPPLPSKKQKVSGAFLDQSIEQLNDVTAVSGVN 671


>ref|XP_002510115.1| transcription initiation factor, putative [Ricinus communis]
            gi|223550816|gb|EEF52302.1| transcription initiation
            factor, putative [Ricinus communis]
          Length = 925

 Score =  143 bits (361), Expect = 7e-32
 Identities = 98/234 (41%), Positives = 139/234 (59%), Gaps = 14/234 (5%)
 Frame = +3

Query: 486  DLQMRQGAVHPSMGASQVGISTQAMNSINLP--DRQAAFSDMKRMHGGNLTHFPSNSALQ 659
            DLQMRQ + H +M ++Q+G ST  +N +++   +R  + SD  R+  G+++ + + SAL 
Sbjct: 396  DLQMRQIS-HSTMASTQIGGSTPTLNMVHVSKFERPNSVSDPSRVQSGSMSQYNNKSALP 454

Query: 660  QNSGHWQQSMHKDQS--LLSSMAYVKPEPVDQMNDQQHRSQLSTLQGPSSFSPGQLEQGS 833
            QNS  WQ   +K+Q+  L  S  YVK EP++Q  DQQ + QLS  QG S+ +PG  EQG+
Sbjct: 455  QNSIPWQAPTNKEQTSPLFPSTNYVKQEPLEQATDQQQKPQLSNPQGLSA-APG--EQGN 511

Query: 834  ALSGFSQDESFEMLSSRPNFSTSMSKPETMSITAQLERQ---NVSAA----NSSLVSGSN 992
            A+   S+++S E  SS+  FS   +   + S++  +  Q   N+ A     + +   G N
Sbjct: 512  AVPVNSKEDSLEKPSSKVGFSNPSTAVPSNSVSPSIAIQPDPNIQAGPRFPSGAASVGVN 571

Query: 993  AKTPPKKPSVGQKKPLEAXXXXXXXXXXXX---GAFSDQSIEQLNDVTAVSGVN 1145
            A+TP KK S+GQKKPLEA               GAF DQSIEQLNDVTAVSGVN
Sbjct: 572  ARTPTKKLSIGQKKPLEALGSSPPMSSKKQKVSGAFLDQSIEQLNDVTAVSGVN 625


>ref|XP_002520510.1| transcription initiation factor, putative [Ricinus communis]
            gi|223540352|gb|EEF41923.1| transcription initiation
            factor, putative [Ricinus communis]
          Length = 927

 Score =  138 bits (347), Expect = 3e-30
 Identities = 94/234 (40%), Positives = 131/234 (55%), Gaps = 14/234 (5%)
 Frame = +3

Query: 486  DLQMRQGAVHPSMGASQVGISTQAMNSINLP--DRQAAFSDMKRMHGGNLTHFPSNSALQ 659
            DLQMR+ + HP+ GA+Q+G S QAM+ I +   +R  + +D  ++  G+   + + SALQ
Sbjct: 363  DLQMRKIS-HPTTGATQIGGSAQAMDMIKVSKFERPNSGTDPNKVQSGSAAQYTNKSALQ 421

Query: 660  QNSGHWQQSMHKDQ--SLLSSMAYVKPEPVDQMNDQQHRSQLSTLQGPSSFSPGQLEQGS 833
             NS  WQ   +K+Q  S   S  YVK EPV+Q  +Q  +SQLS    P   S   +EQG+
Sbjct: 422  PNSAPWQPPTNKEQKSSPFPSKNYVKQEPVEQATEQHQKSQLSN---PQDLSAAPVEQGN 478

Query: 834  ALSGFSQDESFEMLSSRPNFSTSMSKPETMSITAQLERQ-----NVSAANSSLVS--GSN 992
            A++   + +S E  SS+   S   S   + S++  +  +      V +   S+ +  G N
Sbjct: 479  AVTSNLKVDSLEKQSSKVGISIPSSMVPSSSVSTSIATRLDPIIQVGSQIQSIAASPGVN 538

Query: 993  AKTPPKKPSVGQKKPLEAXXXXXXXXXXXXG---AFSDQSIEQLNDVTAVSGVN 1145
            A+TPPKKP +GQKKPLEA                A SDQSIEQLNDVTAVSGVN
Sbjct: 539  ARTPPKKPLIGQKKPLEALGSSPPMSSKKQKISVASSDQSIEQLNDVTAVSGVN 592


>ref|XP_002320699.1| predicted protein [Populus trichocarpa] gi|222861472|gb|EEE99014.1|
            predicted protein [Populus trichocarpa]
          Length = 875

 Score =  137 bits (346), Expect = 4e-30
 Identities = 90/228 (39%), Positives = 124/228 (54%), Gaps = 8/228 (3%)
 Frame = +3

Query: 486  DLQMRQGAVHPSMGASQVGISTQAMNSINLPDRQAAFSDMKRMHGGNLTHFPSNSALQQN 665
            D Q RQ   H ++G +Q+G    +M S    +RQ +  D  R+H G+++H+ + SALQQN
Sbjct: 369  DPQTRQIPHHQNLGVTQIGGPMHSMISTPKFERQNSADDPSRVHSGSVSHYTNKSALQQN 428

Query: 666  SGHWQQSMHKDQS--LLSSMAYVKPEPVDQMNDQQHRSQLSTLQGPSSFSPGQLEQGSAL 839
            S  WQ   ++++S    SS+ YVKP  ++Q  +QQ++ QLS+                  
Sbjct: 429  SAPWQAPSNREKSPASFSSLNYVKPGLLEQAGEQQNKPQLSS------------------ 470

Query: 840  SGFSQDESFEMLSSRPNFSTSMSKPETMSITAQLERQNVSAANSSLV---SGSNAKTPPK 1010
                QD+S +  S++  FST        SI  Q++    + +  S V   +G NA+TPPK
Sbjct: 471  ---PQDQSLDKQSTKIVFSTVPPNSAPPSIATQMDPNGQAGSRISSVASPAGVNARTPPK 527

Query: 1011 KPSVGQKKPLEA---XXXXXXXXXXXXGAFSDQSIEQLNDVTAVSGVN 1145
            KPSVGQKKP EA               GAFSDQSIEQLNDVTAVSGVN
Sbjct: 528  KPSVGQKKPFEALGSSPPASTKKHKVSGAFSDQSIEQLNDVTAVSGVN 575


Top