BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00019452
         (616 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD ...    96   5e-18
emb|CBI32760.3| unnamed protein product [Vitis vinifera]               96   5e-18
ref|XP_004143265.1| PREDICTED: RNA polymerase sigma factor sigF,...    95   1e-17
ref|XP_003590454.1| RNA polymerase sigma factor [Medicago trunca...    94   2e-17
ref|XP_002519509.1| RNA polymerase sigma factor rpoD, putative [...    93   4e-17

>ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
          Length = 572

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 48/94 (51%), Positives = 67/94 (71%)
 Frame = +3

Query: 3   EITADTTIDSPDTNISKQLIRNHISNLLDVLDPNERKVIRLRYGIGVEVHKSLSLVNVGL 182
           E+TADT I+ PD +++KQL+R H+ NLL VL P ER++IRLR+GIG  + ++LS   +GL
Sbjct: 478 EVTADTGIEIPDVSVAKQLMRQHVRNLLHVLTPKERRIIRLRFGIGDGIPRTLS--EIGL 535

Query: 183 IMGLSGERIRQIECGSLFKLKQYSESQELAAYKD 284
           + G S ER+RQ+E  +L KLKQ   S  L +Y D
Sbjct: 536 VFGFSKERVRQLEQRALHKLKQCLSSHGLESYTD 569


>emb|CBI32760.3| unnamed protein product [Vitis vinifera]
          Length = 561

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 48/94 (51%), Positives = 67/94 (71%)
 Frame = +3

Query: 3   EITADTTIDSPDTNISKQLIRNHISNLLDVLDPNERKVIRLRYGIGVEVHKSLSLVNVGL 182
           E+TADT I+ PD +++KQL+R H+ NLL VL P ER++IRLR+GIG  + ++LS   +GL
Sbjct: 467 EVTADTGIEIPDVSVAKQLMRQHVRNLLHVLTPKERRIIRLRFGIGDGIPRTLS--EIGL 524

Query: 183 IMGLSGERIRQIECGSLFKLKQYSESQELAAYKD 284
           + G S ER+RQ+E  +L KLKQ   S  L +Y D
Sbjct: 525 VFGFSKERVRQLEQRALHKLKQCLSSHGLESYTD 558


>ref|XP_004143265.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           [Cucumis sativus] gi|449482444|ref|XP_004156283.1|
           PREDICTED: RNA polymerase sigma factor sigF,
           chloroplastic-like [Cucumis sativus]
          Length = 562

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 46/94 (48%), Positives = 68/94 (72%)
 Frame = +3

Query: 3   EITADTTIDSPDTNISKQLIRNHISNLLDVLDPNERKVIRLRYGIGVEVHKSLSLVNVGL 182
           EITAD+ +D+PD ++ ++L+R HI NLL +L P ER++IRLR+GI  E  +  +L+ +G 
Sbjct: 468 EITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGI--EDGREKTLLEIGN 525

Query: 183 IMGLSGERIRQIECGSLFKLKQYSESQELAAYKD 284
           + GLS ER+RQ+E  +L+KLK+   SQ L AY D
Sbjct: 526 MFGLSKERVRQLENRALYKLKRCCNSQGLGAYAD 559


>ref|XP_003590454.1| RNA polymerase sigma factor [Medicago truncatula]
           gi|355479502|gb|AES60705.1| RNA polymerase sigma factor
           [Medicago truncatula]
          Length = 567

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 48/94 (51%), Positives = 67/94 (71%)
 Frame = +3

Query: 3   EITADTTIDSPDTNISKQLIRNHISNLLDVLDPNERKVIRLRYGIGVEVHKSLSLVNVGL 182
           EITAD  I+SP+ +++KQL+R H+ N+L++L P ER++IRLR+G      KSLS   +G 
Sbjct: 473 EITADCAIESPNMSVAKQLMRRHVLNVLNILRPKERRIIRLRFGFEDGEEKSLS--EIGE 530

Query: 183 IMGLSGERIRQIECGSLFKLKQYSESQELAAYKD 284
           I GLS ER+RQ+E  +L+KLK+Y   Q L AY D
Sbjct: 531 IFGLSRERVRQLESRALYKLKKYLVGQGLDAYAD 564


>ref|XP_002519509.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
           gi|223541372|gb|EEF42923.1| RNA polymerase sigma factor
           rpoD, putative [Ricinus communis]
          Length = 548

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 48/94 (51%), Positives = 66/94 (70%)
 Frame = +3

Query: 3   EITADTTIDSPDTNISKQLIRNHISNLLDVLDPNERKVIRLRYGIGVEVHKSLSLVNVGL 182
           EITAD  ++ P+  ++KQL+R H+ +LL++L+P ERK+IRLRYGI  E  K  SL  +G 
Sbjct: 454 EITADIEVEIPELCVAKQLMRKHVLSLLNILNPRERKIIRLRYGI--EDGKKKSLSEIGS 511

Query: 183 IMGLSGERIRQIECGSLFKLKQYSESQELAAYKD 284
           + GLS ER+RQ+E  +L+KLKQ   S  L AY D
Sbjct: 512 VFGLSKERVRQLESRALYKLKQCLASHGLEAYAD 545