BLASTX nr result

ID: Atractylodes22_contig00019446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00019446
         (953 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247...   185   2e-44
ref|XP_002523656.1| chromodomain helicase DNA binding protein, p...   172   1e-40
ref|XP_002303505.1| chromatin remodeling complex subunit [Populu...   171   2e-40
emb|CBI27197.3| unnamed protein product [Vitis vinifera]              169   1e-39
ref|XP_002329920.1| chromatin remodeling complex subunit [Populu...   163   5e-38

>ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247555 [Vitis vinifera]
          Length = 2355

 Score =  185 bits (469), Expect = 2e-44
 Identities = 87/138 (63%), Positives = 104/138 (75%), Gaps = 4/138 (2%)
 Frame = -1

Query: 689 MKNNESSTSDVINGNWVLKRKRKKISFGPVKSNGNENVSESHTST----SSKCKIKKENS 522
           MK N S TS +IN NWVLKRKR+K+  GP  SNG E  S +  ST    S+K ++K E S
Sbjct: 1   MKENGSMTSKMINRNWVLKRKRRKLPCGPDLSNGKEGTSIASESTGNTSSAKRRLKGEAS 60

Query: 521 SDRSPSKKKGNDGSYYECVICDLGGALLCCDGCPKTYHIACLDPPLKRIPNGKWQCPNCC 342
           SDRS  KKKGNDG Y+ECVICDLGG LLCCD CP+TYH+ CL+PPLKRIPNGKWQCP CC
Sbjct: 61  SDRSALKKKGNDGYYFECVICDLGGNLLCCDSCPRTYHLQCLNPPLKRIPNGKWQCPKCC 120

Query: 341 SENNSIEVINKLDPTSKR 288
            +++S+E ++ LD  SKR
Sbjct: 121 QKSDSLEPMSHLDSISKR 138


>ref|XP_002523656.1| chromodomain helicase DNA binding protein, putative [Ricinus
           communis] gi|223537108|gb|EEF38742.1| chromodomain
           helicase DNA binding protein, putative [Ricinus
           communis]
          Length = 2257

 Score =  172 bits (435), Expect = 1e-40
 Identities = 81/138 (58%), Positives = 100/138 (72%), Gaps = 4/138 (2%)
 Frame = -1

Query: 689 MKNNESSTSDVINGNWVLKRKRKKISFGPVKSNGNEN----VSESHTSTSSKCKIKKENS 522
           MK+N S+TS +IN NWVLKRKRKKI +G V +NG E     +     ++++K + K E  
Sbjct: 1   MKDNGSTTSKMINRNWVLKRKRKKILYGRVLANGKEEKLAPLESPRNASAAKRRSKCELG 60

Query: 521 SDRSPSKKKGNDGSYYECVICDLGGALLCCDGCPKTYHIACLDPPLKRIPNGKWQCPNCC 342
           SD S SKKKGNDG YYECVICDLGG LLCCD CP+ YH+ CLDPPLKRIP GKWQCP C 
Sbjct: 61  SDLSSSKKKGNDGYYYECVICDLGGNLLCCDSCPRVYHLQCLDPPLKRIPMGKWQCPKCY 120

Query: 341 SENNSIEVINKLDPTSKR 288
            +++ ++ I +LD  SKR
Sbjct: 121 QKSDPLKSITQLDSISKR 138


>ref|XP_002303505.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222840937|gb|EEE78484.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 2327

 Score =  171 bits (433), Expect = 2e-40
 Identities = 83/135 (61%), Positives = 100/135 (74%), Gaps = 1/135 (0%)
 Frame = -1

Query: 689 MKNNESSTSDVINGNWVLKRKRKKISFGPVKSNGNENVSESHTSTSS-KCKIKKENSSDR 513
           MK+N S++S +I+ NWVLKRKRKKI +G V S   E+  ES  +TS+ K + K E SSD 
Sbjct: 1   MKDNGSTSSKMISRNWVLKRKRKKILYGRVVSTSKEDNLESPRNTSAAKRRPKSELSSDL 60

Query: 512 SPSKKKGNDGSYYECVICDLGGALLCCDGCPKTYHIACLDPPLKRIPNGKWQCPNCCSEN 333
           S SKKKGNDG YYECVICDLGG LLCCD CP+ YH+ CLDPPLKRIP GKWQCP C  ++
Sbjct: 61  STSKKKGNDGYYYECVICDLGGNLLCCDSCPRVYHLQCLDPPLKRIPMGKWQCPKCSKKS 120

Query: 332 NSIEVINKLDPTSKR 288
           + ++ IN L   SKR
Sbjct: 121 DPLKSINPLGSISKR 135


>emb|CBI27197.3| unnamed protein product [Vitis vinifera]
          Length = 1638

 Score =  169 bits (427), Expect = 1e-39
 Identities = 81/128 (63%), Positives = 94/128 (73%), Gaps = 5/128 (3%)
 Frame = -1

Query: 689 MKNNESSTSDVINGNWVLKRKRKKISFGPVKSNGNENVSESHTST----SSKCKIKKENS 522
           MK N S TS +IN NWVLKRKR+K+  GP  SNG E  S +  ST    S+K ++K E S
Sbjct: 1   MKENGSMTSKMINRNWVLKRKRRKLPCGPDLSNGKEGTSIASESTGNTSSAKRRLKGEAS 60

Query: 521 SDRSPSKKKGNDGSYYECVICDLGGALLCCDGCPKTYHIACLDPPLKRIPNGKWQCPNC- 345
           SDRS  KKKGNDG Y+ECVICDLGG LLCCD CP+TYH+ CL+PPLKRIPNGKWQCP C 
Sbjct: 61  SDRSALKKKGNDGYYFECVICDLGGNLLCCDSCPRTYHLQCLNPPLKRIPNGKWQCPKCF 120

Query: 344 CSENNSIE 321
           CS    ++
Sbjct: 121 CSIEKKLD 128


>ref|XP_002329920.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222871157|gb|EEF08288.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 2332

 Score =  163 bits (413), Expect = 5e-38
 Identities = 78/125 (62%), Positives = 93/125 (74%), Gaps = 1/125 (0%)
 Frame = -1

Query: 659 VINGNWVLKRKRKKISFGPVKSNGNENVSESHTSTSS-KCKIKKENSSDRSPSKKKGNDG 483
           +I+ NWVLKRKRKKI +G V S G E+  ES  +TS+ K + K E SSD S SKKKGNDG
Sbjct: 1   MISRNWVLKRKRKKILYGRVVSTGKEDNLESPRNTSAAKRRPKSEQSSDLSSSKKKGNDG 60

Query: 482 SYYECVICDLGGALLCCDGCPKTYHIACLDPPLKRIPNGKWQCPNCCSENNSIEVINKLD 303
            YYECVICDLGG LLCCD CP+ YH+ CLDPPLKRIP GKWQCP C  +++ ++ I+ L 
Sbjct: 61  YYYECVICDLGGNLLCCDSCPRVYHLQCLDPPLKRIPMGKWQCPKCSQKSDPLKSISPLG 120

Query: 302 PTSKR 288
             SKR
Sbjct: 121 SISKR 125


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