BLASTX nr result

ID: Atractylodes22_contig00019440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00019440
         (1065 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22695.3| unnamed protein product [Vitis vinifera]              313   6e-83
ref|XP_002269721.1| PREDICTED: SKP1-like protein 21-like [Vitis ...   313   6e-83
ref|XP_002513681.1| ubiquitin-protein ligase, putative [Ricinus ...   301   2e-79
ref|XP_002318211.1| predicted protein [Populus trichocarpa] gi|2...   296   8e-78
ref|XP_004145972.1| PREDICTED: SKP1-like protein 21-like [Cucumi...   292   1e-76

>emb|CBI22695.3| unnamed protein product [Vitis vinifera]
          Length = 358

 Score =  313 bits (801), Expect = 6e-83
 Identities = 172/263 (65%), Positives = 194/263 (73%), Gaps = 8/263 (3%)
 Frame = -2

Query: 1064 VPGRSNKERKTFDEKFIRMDTKKLCELTSGADSLQLRPLVDLTSRALARMIEGKTPEEIR 885
            VPGRSNKERK+FDEKFIRMDTKKLCELTS ADSLQL+PLVDLTSRALAR+IEGKTPEEIR
Sbjct: 80   VPGRSNKERKSFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIR 139

Query: 884  ETFHLPDDLTEEEKLEPLRNRTDDPRIRLLNRLYARKRKELKVREKSKNXXXXXXXXXXX 705
            ETFHLPDDLTEEEKLEPLRN TDDPRIRLLNRLYARKRKELK REK KN           
Sbjct: 140  ETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELKEREKLKNVEVEEERVDER 199

Query: 704  XXXXXXLFINSGDEDSKGVKSAXXXXXXXXXXXXXXDPSLNIENGNHRKETDNL-SSSHN 528
                   FIN  D DSKGV+++              D S N  NG+H+KE D + +S HN
Sbjct: 200  SVDDLLSFINGEDGDSKGVRASKNKKKNRRRKDQMKDSSSNNVNGDHKKELDGVHTSCHN 259

Query: 527  SETED--VPSPSKISKLLGSSSPMNSPELDF-----DDELDPAMKEELDREVEDFARRLN 369
            +E ++  V +PSK SKL    +   SP+L+F     DDELDPAMKE+LDREVEDFARRLN
Sbjct: 260  AEADEMLVSTPSKTSKLQELPASTFSPKLEFDDGDIDDELDPAMKEQLDREVEDFARRLN 319

Query: 368  SVWPERVQGIISLGQDRSIAPVS 300
            S WPER+Q I+SLGQ R + P+S
Sbjct: 320  SDWPERMQEILSLGQQRRLVPIS 342


>ref|XP_002269721.1| PREDICTED: SKP1-like protein 21-like [Vitis vinifera]
          Length = 359

 Score =  313 bits (801), Expect = 6e-83
 Identities = 172/263 (65%), Positives = 194/263 (73%), Gaps = 8/263 (3%)
 Frame = -2

Query: 1064 VPGRSNKERKTFDEKFIRMDTKKLCELTSGADSLQLRPLVDLTSRALARMIEGKTPEEIR 885
            VPGRSNKERK+FDEKFIRMDTKKLCELTS ADSLQL+PLVDLTSRALAR+IEGKTPEEIR
Sbjct: 80   VPGRSNKERKSFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIR 139

Query: 884  ETFHLPDDLTEEEKLEPLRNRTDDPRIRLLNRLYARKRKELKVREKSKNXXXXXXXXXXX 705
            ETFHLPDDLTEEEKLEPLRN TDDPRIRLLNRLYARKRKELK REK KN           
Sbjct: 140  ETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELKEREKLKNVEVEEERVDER 199

Query: 704  XXXXXXLFINSGDEDSKGVKSAXXXXXXXXXXXXXXDPSLNIENGNHRKETDNL-SSSHN 528
                   FIN  D DSKGV+++              D S N  NG+H+KE D + +S HN
Sbjct: 200  SVDDLLSFINGEDGDSKGVRASKNKKKNRRRKDQMKDSSSNNVNGDHKKELDGVHTSCHN 259

Query: 527  SETED--VPSPSKISKLLGSSSPMNSPELDF-----DDELDPAMKEELDREVEDFARRLN 369
            +E ++  V +PSK SKL    +   SP+L+F     DDELDPAMKE+LDREVEDFARRLN
Sbjct: 260  AEADEMLVSTPSKTSKLQELPASTFSPKLEFDDGDIDDELDPAMKEQLDREVEDFARRLN 319

Query: 368  SVWPERVQGIISLGQDRSIAPVS 300
            S WPER+Q I+SLGQ R + P+S
Sbjct: 320  SDWPERMQEILSLGQQRRLVPIS 342


>ref|XP_002513681.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223547589|gb|EEF49084.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 378

 Score =  301 bits (770), Expect = 2e-79
 Identities = 166/262 (63%), Positives = 191/262 (72%), Gaps = 7/262 (2%)
 Frame = -2

Query: 1064 VPGRSNKERKTFDEKFIRMDTKKLCELTSGADSLQLRPLVDLTSRALARMIEGKTPEEIR 885
            VPGRSNKERKTFDEKFIRMDTK+LCELTS ADSLQL+PLVDLTSRALAR+IEGKTPEEIR
Sbjct: 68   VPGRSNKERKTFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIR 127

Query: 884  ETFHLPDDLTEEEKLEPLRNRTDDPRIRLLNRLYARKRKELKVREKSKNXXXXXXXXXXX 705
            ETFHLPDDLTEEEKLEPLRN TDDPRIRLLNRLYARKRKELK REK KN           
Sbjct: 128  ETFHLPDDLTEEEKLEPLRNVTDDPRIRLLNRLYARKRKELKEREKMKNVEVEEERVDER 187

Query: 704  XXXXXXLFINSGDEDSKGVKSAXXXXXXXXXXXXXXDPSLNIENGNHRKETDNL-SSSHN 528
                   +IN  D D KG +++              + S N  N NH K+T++  S+ H+
Sbjct: 188  SVDDLLSYINGADGDPKGGRTSKNKKKNRRRKDQSKESSSNNLNENHNKKTNSCPSACHS 247

Query: 527  SETED-VPSPSKISKLLGSSSPMNSPELDF-----DDELDPAMKEELDREVEDFARRLNS 366
             E  D V SPSK S+    ++ + SP+L+F     DD+LDPAMKEELDREVEDFARRLNS
Sbjct: 248  GEVRDMVASPSKTSRQESGAASL-SPKLEFDDADIDDDLDPAMKEELDREVEDFARRLNS 306

Query: 365  VWPERVQGIISLGQDRSIAPVS 300
             WPER+Q I+SLGQ+R + P+S
Sbjct: 307  DWPERMQEILSLGQERRLVPLS 328


>ref|XP_002318211.1| predicted protein [Populus trichocarpa] gi|222858884|gb|EEE96431.1|
            predicted protein [Populus trichocarpa]
          Length = 363

 Score =  296 bits (757), Expect = 8e-78
 Identities = 167/263 (63%), Positives = 185/263 (70%), Gaps = 8/263 (3%)
 Frame = -2

Query: 1064 VPGRSNKERKTFDEKFIRMDTKKLCELTSGADSLQLRPLVDLTSRALARMIEGKTPEEIR 885
            VPG SNKERKTFDEKFIRMDTK+LCELTS ADSLQL+PLVDLTSRALAR+IEGKTPEEIR
Sbjct: 80   VPGHSNKERKTFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIR 139

Query: 884  ETFHLPDDLTEEEKLEPLRNRTDDPRIRLLNRLYARKRKELKVREKSKNXXXXXXXXXXX 705
            ETFHLPDDLTEEEKLEPL N TDDPRIRLLNRLYARKR+EL+ REK KN           
Sbjct: 140  ETFHLPDDLTEEEKLEPLGNITDDPRIRLLNRLYARKRRELREREKLKNVDVEDERSDNR 199

Query: 704  XXXXXXLFINSGDEDSKGVKSAXXXXXXXXXXXXXXDPSLNIENGNHRKETDNLSS-SHN 528
                   FIN  D DSKG +++              D S N  N N +KE+D L S S N
Sbjct: 200  SVEDLLSFINGEDGDSKGGRNSKNKKKNRRRKEQAKDSSSNNPNENQKKESDTLPSVSLN 259

Query: 527  SETEDV--PSPSKISKLLGSSSPMNSPELDF-----DDELDPAMKEELDREVEDFARRLN 369
             E  D+   SPSK S   G S+   SP+LDF     DD+LDPAMKEELDREVEDFARRLN
Sbjct: 260  DEVNDILAASPSKTSNFQGCSAVTFSPKLDFDDADIDDDLDPAMKEELDREVEDFARRLN 319

Query: 368  SVWPERVQGIISLGQDRSIAPVS 300
            S WPER+Q I+SL Q +   P+S
Sbjct: 320  SDWPERMQEILSLDQKKRPVPLS 342


>ref|XP_004145972.1| PREDICTED: SKP1-like protein 21-like [Cucumis sativus]
            gi|449524038|ref|XP_004169030.1| PREDICTED: SKP1-like
            protein 21-like [Cucumis sativus]
          Length = 425

 Score =  292 bits (747), Expect = 1e-76
 Identities = 170/264 (64%), Positives = 187/264 (70%), Gaps = 10/264 (3%)
 Frame = -2

Query: 1064 VPGRSNKERKTFDEKFIRMDTKKLCELTSGADSLQLRPLVDLTSRALARMIEGKTPEEIR 885
            VPGRSNKERKTFDEKFIRMDTKKLCELTS ADSLQL+PLVDLTSRALAR+IEGKTPEEIR
Sbjct: 80   VPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIR 139

Query: 884  ETFHLPDDLTEEEKLEPLRNRTDDPRIRLLNRLYARKRKELKVREKSKNXXXXXXXXXXX 705
            ETFHLPDDLTEEEKLEPLRN TDDPRIRLLNRLYARKRKEL+ REK KN           
Sbjct: 140  ETFHLPDDLTEEEKLEPLRNITDDPRIRLLNRLYARKRKELREREKLKN-VEIEERVDDR 198

Query: 704  XXXXXXLFINSGDEDSKGVK-SAXXXXXXXXXXXXXXDPSLNIENGNHRK-ETDNL-SSS 534
                   FIN GD DSK VK +                 S   ENGNH K E D L S  
Sbjct: 199  SVDDLLSFINGGDGDSKAVKTNKNKKKNRRRKDQQKDSSSTTNENGNHDKIELDALPSCC 258

Query: 533  HNSETEDV--PSPSKISKLLGSSSPMNSPELDFD-----DELDPAMKEELDREVEDFARR 375
             N+E   +   SPS+  K   S++ M S +++FD     D+LDPAMKEELDREVEDFARR
Sbjct: 259  QNNEFNQILGASPSRTVKSQDSAAAMYSSKIEFDDADIYDDLDPAMKEELDREVEDFARR 318

Query: 374  LNSVWPERVQGIISLGQDRSIAPV 303
            LNS WPERVQ I+SLGQ+R++  V
Sbjct: 319  LNSDWPERVQEILSLGQERNLVTV 342


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