BLASTX nr result

ID: Atractylodes22_contig00019393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00019393
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004167072.1| PREDICTED: pentatricopeptide repeat-containi...   187   2e-45
ref|XP_004147297.1| PREDICTED: pentatricopeptide repeat-containi...   187   2e-45
ref|XP_002324476.1| predicted protein [Populus trichocarpa] gi|2...   179   8e-43
ref|XP_003606459.1| Pentatricopeptide repeat-containing protein ...   171   2e-40
gb|AAC73020.1| hypothetical protein [Arabidopsis thaliana]            153   4e-35

>ref|XP_004167072.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27800,
           mitochondrial-like [Cucumis sativus]
          Length = 428

 Score =  187 bits (476), Expect = 2e-45
 Identities = 90/132 (68%), Positives = 109/132 (82%)
 Frame = -1

Query: 398 SKSYRKRVNRRNLLVSKPTLDEFQFRRAVSQLLPRFKPQELCHLIHLQQDPLVCLELFNW 219
           S+S+RKR N+R     KP LDE QF+ AVS++ PRF  +ELC++I LQ+DPLVC ELFNW
Sbjct: 83  SRSFRKRANKRLKSSLKPKLDETQFQLAVSKIPPRFTSEELCNVISLQRDPLVCFELFNW 142

Query: 218 ASQQPRFTHDVSTFHVTIKKLGAAKMYDEMNHVVNQVLANPSFGSEVLYNTMIYFFTEAR 39
           ASQQPRF HD S++ +TIKKLG AKMY+EM+HVVNQ LA  S GSE LYNTMIYFFTEAR
Sbjct: 143 ASQQPRFRHDDSSYEITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIYFFTEAR 202

Query: 38  KLSRAVNVYKHI 3
           KL+RAVN++KH+
Sbjct: 203 KLTRAVNIFKHM 214


>ref|XP_004147297.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27800,
           mitochondrial-like [Cucumis sativus]
          Length = 428

 Score =  187 bits (476), Expect = 2e-45
 Identities = 90/132 (68%), Positives = 109/132 (82%)
 Frame = -1

Query: 398 SKSYRKRVNRRNLLVSKPTLDEFQFRRAVSQLLPRFKPQELCHLIHLQQDPLVCLELFNW 219
           S+S+RKR N+R     KP LDE QF+ AVS++ PRF  +ELC++I LQ+DPLVC ELFNW
Sbjct: 83  SRSFRKRANKRLKSSLKPKLDETQFQLAVSKIPPRFTSEELCNVISLQRDPLVCFELFNW 142

Query: 218 ASQQPRFTHDVSTFHVTIKKLGAAKMYDEMNHVVNQVLANPSFGSEVLYNTMIYFFTEAR 39
           ASQQPRF HD S++ +TIKKLG AKMY+EM+HVVNQ LA  S GSE LYNTMIYFFTEAR
Sbjct: 143 ASQQPRFRHDDSSYEITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIYFFTEAR 202

Query: 38  KLSRAVNVYKHI 3
           KL+RAVN++KH+
Sbjct: 203 KLTRAVNIFKHM 214


>ref|XP_002324476.1| predicted protein [Populus trichocarpa] gi|222865910|gb|EEF03041.1|
           predicted protein [Populus trichocarpa]
          Length = 440

 Score =  179 bits (453), Expect = 8e-43
 Identities = 95/170 (55%), Positives = 124/170 (72%), Gaps = 1/170 (0%)
 Frame = -1

Query: 509 SIASKSIRRLQQICKLPQNPKC-STQFSSRYMLVSLFSSKSYRKRVNRRNLLVSKPTLDE 333
           S  + + R+L+ +  L Q     S+ FS+ Y   +   S+S+RKR N+R    S+P LDE
Sbjct: 53  SYLNPTARKLKDVDLLAQTQILPSSNFSTFYSTKA--PSRSFRKRNNKRAKANSRPILDE 110

Query: 332 FQFRRAVSQLLPRFKPQELCHLIHLQQDPLVCLELFNWASQQPRFTHDVSTFHVTIKKLG 153
            +F+R+VSQL  RF  +ELC+ I L+ DPLVCLELFNWASQQ RF HD ST+HVTIKKLG
Sbjct: 111 AKFQRSVSQLPSRFTNEELCNNITLEDDPLVCLELFNWASQQHRFRHDASTYHVTIKKLG 170

Query: 152 AAKMYDEMNHVVNQVLANPSFGSEVLYNTMIYFFTEARKLSRAVNVYKHI 3
            AKMY EM+ VVNQ+LA P  G+E LYN++IY+FTEARKL+RAVN++K +
Sbjct: 171 IAKMYQEMDDVVNQLLAVPHIGNEALYNSIIYYFTEARKLTRAVNIFKRM 220


>ref|XP_003606459.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355507514|gb|AES88656.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 418

 Score =  171 bits (432), Expect = 2e-40
 Identities = 86/144 (59%), Positives = 111/144 (77%)
 Frame = -1

Query: 434 FSSRYMLVSLFSSKSYRKRVNRRNLLVSKPTLDEFQFRRAVSQLLPRFKPQELCHLIHLQ 255
           F+S +   +   S+SYR+R   R L  +KP LD+ +F+ A SQLLPRF P+EL ++I  Q
Sbjct: 48  FNSYHYYSTKTPSRSYRRRARNRFLKANKPVLDQEKFQFAQSQLLPRFTPEELRNVIANQ 107

Query: 254 QDPLVCLELFNWASQQPRFTHDVSTFHVTIKKLGAAKMYDEMNHVVNQVLANPSFGSEVL 75
           +DPLVCLELF+WAS QPRF H+ S+FHVTIKKLG AKMY EM+ VVNQ+LA  S G+E L
Sbjct: 108 RDPLVCLELFHWASHQPRFRHNESSFHVTIKKLGDAKMYQEMDDVVNQLLAVRSIGNEAL 167

Query: 74  YNTMIYFFTEARKLSRAVNVYKHI 3
           +N +IY+FTEARKL+RAV V+KH+
Sbjct: 168 FNMIIYYFTEARKLTRAVIVFKHM 191


>gb|AAC73020.1| hypothetical protein [Arabidopsis thaliana]
          Length = 427

 Score =  153 bits (387), Expect = 4e-35
 Identities = 74/147 (50%), Positives = 106/147 (72%)
 Frame = -1

Query: 443 STQFSSRYMLVSLFSSKSYRKRVNRRNLLVSKPTLDEFQFRRAVSQLLPRFKPQELCHLI 264
           ST FSSR    S   ++S R+R++ R    +KP L+  +F   +S+L PRF P+EL   I
Sbjct: 73  STWFSSR-RTSSQVPTRSLRRRISNRKKSSAKPILNVSKFHETISKLPPRFTPEELADAI 131

Query: 263 HLQQDPLVCLELFNWASQQPRFTHDVSTFHVTIKKLGAAKMYDEMNHVVNQVLANPSFGS 84
            L++DP +C  LFNWASQQPRFTH+  ++H+ I+KLGAAKMY EM+ +VNQVL+    G+
Sbjct: 132 TLEEDPFLCFHLFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGN 191

Query: 83  EVLYNTMIYFFTEARKLSRAVNVYKHI 3
           E LYN++I++FT+A KL RAVN+++H+
Sbjct: 192 ENLYNSIIFYFTKAGKLIRAVNIFRHM 218


Top