BLASTX nr result

ID: Atractylodes22_contig00019382 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00019382
         (885 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520700.1| RNA binding protein, putative [Ricinus commu...   432   e-119
ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 i...   427   e-117
ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 i...   419   e-115
ref|XP_004148884.1| PREDICTED: CUGBP Elav-like family member 2-l...   409   e-112
ref|XP_002320377.1| predicted protein [Populus trichocarpa] gi|2...   409   e-112

>ref|XP_002520700.1| RNA binding protein, putative [Ricinus communis]
           gi|223540085|gb|EEF41662.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 436

 Score =  432 bits (1112), Expect = e-119
 Identities = 218/308 (70%), Positives = 242/308 (78%), Gaps = 14/308 (4%)
 Frame = -3

Query: 883 NIIKDKATRASRGCCFVICPSREEADKAVDALHNKSTLPGASSPLQVKYADGELERLEHK 704
           NIIKDK TRASRGCCFVICPSR+EADKAV+A HNK TLPGASSPLQVKYADGELERLEHK
Sbjct: 45  NIIKDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHK 104

Query: 703 LFVGMLPKNVSEGEVSALFSQYGTLKDLQILRGSQQTSKGCAFVKYETKEQAFAAIEGLN 524
           LFVGMLPKNVSE EVS LFS YGT+KDLQILRGSQQTSKGCAF+KYETKEQA AA+E +N
Sbjct: 105 LFVGMLPKNVSEAEVSELFSTYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAIN 164

Query: 523 GKHEMEGSTVPLVVKWADTEKERQARKAQKAQSLASNLANVDPTQHPSLFGALPMGYMSP 344
           GKH+MEGS+VPLVVKWADTEKERQAR+AQK QS ASNL N D +QHPSLFGALPMGY+  
Sbjct: 165 GKHKMEGSSVPLVVKWADTEKERQARRAQKVQSQASNLPNAD-SQHPSLFGALPMGYVPQ 223

Query: 343 FNSYGYQATGTYGLMQYRLPPVQNQPPFTNLTP--NQANALRGG---------SPRNYAV 197
           +N YGYQA GTYGLM YRLPP+Q+QP F ++ P  NQ NALRGG          PRNYA+
Sbjct: 224 YNGYGYQAPGTYGLMPYRLPPLQSQPAFHSIIPPVNQGNALRGGVRPDLGPSMGPRNYAL 283

Query: 196 PPAGYMGSAYPAMPRVQYPLPYPGGM---RPFGGPSSPVPPEVAKKHXXXXXXXXXXXTD 26
           PPA Y+GSAYPA+P +QYP+ YPGGM   RP       V P V   +             
Sbjct: 284 PPASYVGSAYPAVPGIQYPMAYPGGMMSPRPLSSSPGAVSPTVGSSNSATSSGVSSSSGG 343

Query: 25  HVEGPPGA 2
            +EGPPG+
Sbjct: 344 QLEGPPGS 351



 Score = 63.9 bits (154), Expect = 5e-08
 Identities = 34/115 (29%), Positives = 68/115 (59%), Gaps = 1/115 (0%)
 Frame = -3

Query: 706 KLFVGMLPKNVSEGEVSALFSQYGTLKDLQILRG-SQQTSKGCAFVKYETKEQAFAAIEG 530
           KLFVG +PK+++E ++ A+F ++  + ++ I++  + + S+GC FV   ++++A  A+  
Sbjct: 16  KLFVGQVPKHMTEVQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVNA 75

Query: 529 LNGKHEMEGSTVPLVVKWADTEKERQARKAQKAQSLASNLANVDPTQHPSLFGAL 365
            + K  + G++ PL VK+AD E ER   K      L  N++  + ++  S +G +
Sbjct: 76  CHNKKTLPGASSPLQVKYADGELERLEHKLFVGM-LPKNVSEAEVSELFSTYGTI 129


>ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 isoform 1 [Vitis
           vinifera] gi|296086641|emb|CBI32276.3| unnamed protein
           product [Vitis vinifera]
          Length = 437

 Score =  427 bits (1099), Expect = e-117
 Identities = 215/307 (70%), Positives = 243/307 (79%), Gaps = 13/307 (4%)
 Frame = -3

Query: 883 NIIKDKATRASRGCCFVICPSREEADKAVDALHNKSTLPGASSPLQVKYADGELERLEHK 704
           NIIKDKATRASRGCCFVICPSR+EADKAV+A HNK TLPGASSPLQVKYADGELERLEHK
Sbjct: 45  NIIKDKATRASRGCCFVICPSRQEADKAVNACHNKRTLPGASSPLQVKYADGELERLEHK 104

Query: 703 LFVGMLPKNVSEGEVSALFSQYGTLKDLQILRGSQQTSKGCAFVKYETKEQAFAAIEGLN 524
           LFVGMLPKNVSE EVS+LFS+YGT+KDLQILRGSQQTSKGCAF+KYETKEQA AA+E +N
Sbjct: 105 LFVGMLPKNVSEAEVSSLFSKYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAIN 164

Query: 523 GKHEMEGSTVPLVVKWADTEKERQARKAQKAQSLASNLANVDPTQHPSLFGALPMGYMSP 344
           GKH+MEGS+VPLVVKWADTEKERQARKAQKAQS ASNL + D  QHPSLFGALP+GY+ P
Sbjct: 165 GKHKMEGSSVPLVVKWADTEKERQARKAQKAQSQASNLPSADSGQHPSLFGALPLGYVPP 224

Query: 343 FNSYGYQATGTYGLMQYRLPPVQNQPPFTNLTP--NQANAL--------RGGSPRNYAVP 194
           +N YGYQA G YGLMQYR+PP+Q+Q  F N+ P  NQ +A+        R  +PRNYAVP
Sbjct: 225 YNGYGYQAPGAYGLMQYRMPPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYAVP 284

Query: 193 PAGYMGSAYPAMPRVQYPLPYPGGM---RPFGGPSSPVPPEVAKKHXXXXXXXXXXXTDH 23
            A YMGSAYPA+P +QYP+ Y GG+   +P  G     PP +   +              
Sbjct: 285 SASYMGSAYPALPGLQYPMAYHGGIMSHQPLSGSPGSRPPAMMTSNSPTNSGAGASSGGQ 344

Query: 22  VEGPPGA 2
           VEGPPGA
Sbjct: 345 VEGPPGA 351



 Score = 66.2 bits (160), Expect = 9e-09
 Identities = 31/89 (34%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
 Frame = -3

Query: 706 KLFVGMLPKNVSEGEVSALFSQYGTLKDLQILRG-SQQTSKGCAFVKYETKEQAFAAIEG 530
           KLFVG +PKN++E ++ A+F ++  + ++ I++  + + S+GC FV   ++++A  A+  
Sbjct: 16  KLFVGQVPKNMTEAQLLAMFKEFALVDEVNIIKDKATRASRGCCFVICPSRQEADKAVNA 75

Query: 529 LNGKHEMEGSTVPLVVKWADTEKERQARK 443
            + K  + G++ PL VK+AD E ER   K
Sbjct: 76  CHNKRTLPGASSPLQVKYADGELERLEHK 104


>ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 isoform 2 [Vitis
           vinifera]
          Length = 447

 Score =  419 bits (1078), Expect = e-115
 Identities = 215/317 (67%), Positives = 243/317 (76%), Gaps = 23/317 (7%)
 Frame = -3

Query: 883 NIIKDKATRASRGCCFVICPSREEADKAVDALHNKSTLPGASSPLQVKYADGELERL--- 713
           NIIKDKATRASRGCCFVICPSR+EADKAV+A HNK TLPGASSPLQVKYADGELERL   
Sbjct: 45  NIIKDKATRASRGCCFVICPSRQEADKAVNACHNKRTLPGASSPLQVKYADGELERLGVI 104

Query: 712 -------EHKLFVGMLPKNVSEGEVSALFSQYGTLKDLQILRGSQQTSKGCAFVKYETKE 554
                  EHKLFVGMLPKNVSE EVS+LFS+YGT+KDLQILRGSQQTSKGCAF+KYETKE
Sbjct: 105 FCHPCYPEHKLFVGMLPKNVSEAEVSSLFSKYGTIKDLQILRGSQQTSKGCAFLKYETKE 164

Query: 553 QAFAAIEGLNGKHEMEGSTVPLVVKWADTEKERQARKAQKAQSLASNLANVDPTQHPSLF 374
           QA AA+E +NGKH+MEGS+VPLVVKWADTEKERQARKAQKAQS ASNL + D  QHPSLF
Sbjct: 165 QALAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQKAQSQASNLPSADSGQHPSLF 224

Query: 373 GALPMGYMSPFNSYGYQATGTYGLMQYRLPPVQNQPPFTNLTP--NQANAL--------R 224
           GALP+GY+ P+N YGYQA G YGLMQYR+PP+Q+Q  F N+ P  NQ +A+        R
Sbjct: 225 GALPLGYVPPYNGYGYQAPGAYGLMQYRMPPMQSQAAFHNMIPQVNQGSAMRAIAPDLAR 284

Query: 223 GGSPRNYAVPPAGYMGSAYPAMPRVQYPLPYPGGM---RPFGGPSSPVPPEVAKKHXXXX 53
             +PRNYAVP A YMGSAYPA+P +QYP+ Y GG+   +P  G     PP +   +    
Sbjct: 285 AVAPRNYAVPSASYMGSAYPALPGLQYPMAYHGGIMSHQPLSGSPGSRPPAMMTSNSPTN 344

Query: 52  XXXXXXXTDHVEGPPGA 2
                     VEGPPGA
Sbjct: 345 SGAGASSGGQVEGPPGA 361



 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 30/85 (35%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
 Frame = -3

Query: 706 KLFVGMLPKNVSEGEVSALFSQYGTLKDLQILRG-SQQTSKGCAFVKYETKEQAFAAIEG 530
           KLFVG +PKN++E ++ A+F ++  + ++ I++  + + S+GC FV   ++++A  A+  
Sbjct: 16  KLFVGQVPKNMTEAQLLAMFKEFALVDEVNIIKDKATRASRGCCFVICPSRQEADKAVNA 75

Query: 529 LNGKHEMEGSTVPLVVKWADTEKER 455
            + K  + G++ PL VK+AD E ER
Sbjct: 76  CHNKRTLPGASSPLQVKYADGELER 100


>ref|XP_004148884.1| PREDICTED: CUGBP Elav-like family member 2-like [Cucumis sativus]
           gi|449491521|ref|XP_004158924.1| PREDICTED: CUGBP
           Elav-like family member 2-like [Cucumis sativus]
          Length = 438

 Score =  409 bits (1050), Expect = e-112
 Identities = 210/305 (68%), Positives = 238/305 (78%), Gaps = 11/305 (3%)
 Frame = -3

Query: 883 NIIKDKATRASRGCCFVICPSREEADKAVDALHNKSTLPGASSPLQVKYADGELERLEHK 704
           NII+DK TRASRGCCFVICPSR+EADKAV+A HNK TLPGASSPLQVKYADGELERLEHK
Sbjct: 52  NIIRDKTTRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHK 111

Query: 703 LFVGMLPKNVSEGEVSALFSQYGTLKDLQILRGSQQTSKGCAFVKYETKEQAFAAIEGLN 524
           LF+GMLPKNVSE EVS LFSQYGT+KDLQILRGSQQTSKGCAF+KYETK+QA AA+E +N
Sbjct: 112 LFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAIN 171

Query: 523 GKHEMEGSTVPLVVKWADTEKERQARKAQKAQSLASNLANVDPTQHPSLFGALPMGYMSP 344
           GK +MEGS+VPLVVKWADTEKERQARKAQKAQS A+N+ N D +QHPSLFGA+P+GY+ P
Sbjct: 172 GKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQATNVLNAD-SQHPSLFGAMPLGYVPP 230

Query: 343 FNSYGYQATGTYGLMQYRLPPVQNQPPFTNLTP--NQANALRGGSP--------RNYAVP 194
           +N YGYQA G+YGLMQY LPP+QNQ  F N+ P  NQ NA+RG  P        RNYA+P
Sbjct: 231 YNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMP 290

Query: 193 PAGYMGSAYPAMPRVQYPLPYPGG-MRPFGGPSSPVPPEVAKKHXXXXXXXXXXXTDHVE 17
           PA Y  SAYP +P +Q+P+ YPGG M P    SSP P                     +E
Sbjct: 291 PASY--SAYPGVPALQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNSPTSSMGKGSGGQIE 348

Query: 16  GPPGA 2
           GPPGA
Sbjct: 349 GPPGA 353



 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 32/101 (31%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
 Frame = -3

Query: 742 KYADGELERLEHKLFVGMLPKNVSEGEVSALFSQYGTLKDLQILRG-SQQTSKGCAFVKY 566
           K +  + E    KLFVG +PK+++E ++  +F ++  + ++ I+R  + + S+GC FV  
Sbjct: 11  KESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTRASRGCCFVIC 70

Query: 565 ETKEQAFAAIEGLNGKHEMEGSTVPLVVKWADTEKERQARK 443
            ++++A  A+   + K  + G++ PL VK+AD E ER   K
Sbjct: 71  PSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHK 111


>ref|XP_002320377.1| predicted protein [Populus trichocarpa] gi|222861150|gb|EEE98692.1|
           predicted protein [Populus trichocarpa]
          Length = 432

 Score =  409 bits (1050), Expect = e-112
 Identities = 213/308 (69%), Positives = 235/308 (76%), Gaps = 14/308 (4%)
 Frame = -3

Query: 883 NIIKDKATRASRGCCFVICPSREEADKAVDALHNKSTLPGASSPLQVKYADGELERLEHK 704
           NIIKDK TRASRGCCF+ICPSR+EADKAV+A HNK TLPGASSPLQVKYADGELERLEHK
Sbjct: 46  NIIKDKTTRASRGCCFLICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHK 105

Query: 703 LFVGMLPKNVSEGEVSALFSQYGTLKDLQILRGSQQTSKGCAFVKYETKEQAFAAIEGLN 524
           LFVGMLPKNVSE EVS LFS+YGT+KDLQILRGSQQTSK CAF+KYETKEQA AA+E +N
Sbjct: 106 LFVGMLPKNVSEAEVSDLFSKYGTIKDLQILRGSQQTSKSCAFLKYETKEQALAALEDIN 165

Query: 523 GKHEMEGSTVPLVVKWADTEKERQARKAQKAQSLASNLANVDPTQHPSLFGALPMGYMSP 344
           GKH+MEGS+VPLVVKWADTEKERQAR+AQKAQS A  + N D +QHPSLFGALPMGY  P
Sbjct: 166 GKHKMEGSSVPLVVKWADTEKERQARRAQKAQSQA--MPNTD-SQHPSLFGALPMGYAPP 222

Query: 343 FNSYGYQATGTYGLMQYRLPPVQNQPPFTNLTP--NQANALRGG---------SPRNYAV 197
           +N YGYQA G YGLM YRLPP+QNQP F ++ P  NQ N LRGG         SPRNYA 
Sbjct: 223 YNGYGYQAPGVYGLMPYRLPPMQNQPAFHSMVPPVNQGNVLRGGIRPDLSPNISPRNYA- 281

Query: 196 PPAGYMGSAYPAMPRVQYPLPYPGGM---RPFGGPSSPVPPEVAKKHXXXXXXXXXXXTD 26
            PA YMGSAYP +  +QYP+ YPG M   RP       + P V   +             
Sbjct: 282 -PATYMGSAYPTVTGLQYPVAYPGAMMTHRPLSSSPGALSPTVVSSNSATPSGVGGSSGV 340

Query: 25  HVEGPPGA 2
            VEGPPGA
Sbjct: 341 QVEGPPGA 348



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 31/89 (34%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
 Frame = -3

Query: 706 KLFVGMLPKNVSEGEVSALFSQYGTLKDLQILRG-SQQTSKGCAFVKYETKEQAFAAIEG 530
           KLFVG +PKN++E E+ A+F  +  + ++ I++  + + S+GC F+   ++++A  A+  
Sbjct: 17  KLFVGQVPKNMTEAELLAMFKDFALVDEVNIIKDKTTRASRGCCFLICPSRQEADKAVNA 76

Query: 529 LNGKHEMEGSTVPLVVKWADTEKERQARK 443
            + K  + G++ PL VK+AD E ER   K
Sbjct: 77  CHNKKTLPGASSPLQVKYADGELERLEHK 105


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