BLASTX nr result

ID: Atractylodes22_contig00019282 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00019282
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531090.1| PREDICTED: high mobility group B protein 14-...   135   3e-30
ref|NP_001237839.1| uncharacterized protein LOC100305607 [Glycin...   131   5e-29
ref|XP_002305996.1| high mobility group family [Populus trichoca...   131   7e-29
ref|XP_004134634.1| PREDICTED: high mobility group B protein 14-...   129   2e-28
ref|XP_002275908.1| PREDICTED: high mobility group B protein 14 ...   128   4e-28

>ref|XP_003531090.1| PREDICTED: high mobility group B protein 14-like [Glycine max]
          Length = 148

 Score =  135 bits (341), Expect = 3e-30
 Identities = 71/113 (62%), Positives = 85/113 (75%), Gaps = 4/113 (3%)
 Frame = -3

Query: 329 MAKIASGSAPAETPKKTAHGKMAVRPRS----KLTMKQSNTAKRPKMAVAKKKASKLDAN 162
           MAK A GS  A +   ++  K+ +R +S    K +++Q+N+ K+PK A  KK     DA 
Sbjct: 1   MAKKAKGSHSASSASASSR-KLVLRIKSNEGIKRSVRQTNSRKKPK-AKQKKNKQMFDAM 58

Query: 161 KPKKPPTAFFYFLEDFRKDFQEQNPDVKSMREIGKACGEKWKIMTYEEKVQYY 3
           KPKKPPTAFFYFLEDFRK+FQEQNPDVKSMR+IGKACGEKWK MTYEEKVQYY
Sbjct: 59  KPKKPPTAFFYFLEDFRKEFQEQNPDVKSMRDIGKACGEKWKTMTYEEKVQYY 111


>ref|NP_001237839.1| uncharacterized protein LOC100305607 [Glycine max]
           gi|255626057|gb|ACU13373.1| unknown [Glycine max]
          Length = 150

 Score =  131 bits (330), Expect = 5e-29
 Identities = 69/114 (60%), Positives = 85/114 (74%), Gaps = 5/114 (4%)
 Frame = -3

Query: 329 MAKIASGSAPAETPKKTAHG-KMAVRPRS----KLTMKQSNTAKRPKMAVAKKKASKLDA 165
           MAK A GS  A +   ++   K+ +R +S    K +++Q+N+ K+ K A  KK   K DA
Sbjct: 1   MAKKAKGSHSASSASASSSSDKLVLRIKSNEGTKRSVRQTNSRKKLK-AKQKKNKQKFDA 59

Query: 164 NKPKKPPTAFFYFLEDFRKDFQEQNPDVKSMREIGKACGEKWKIMTYEEKVQYY 3
            KP+KPPTAFFYFLEDFRK+FQEQNPDV+SMR+IGKACGEKWK MTYEEKVQYY
Sbjct: 60  MKPRKPPTAFFYFLEDFRKEFQEQNPDVRSMRDIGKACGEKWKTMTYEEKVQYY 113


>ref|XP_002305996.1| high mobility group family [Populus trichocarpa]
           gi|222848960|gb|EEE86507.1| high mobility group family
           [Populus trichocarpa]
          Length = 165

 Score =  131 bits (329), Expect = 7e-29
 Identities = 69/127 (54%), Positives = 83/127 (65%), Gaps = 9/127 (7%)
 Frame = -3

Query: 356 ETSPSKYLAMAKIASGSAPAETPKKTAHGKMAVRPRSKLTMKQSN---------TAKRPK 204
           + S SK    +  +S ++   + + +  GKM +R RS    K+S            +RPK
Sbjct: 4   KASKSKKCRSSSSSSLASSTSSKRVSKEGKMVLRIRSNEITKRSTRQQRVVRSENERRPK 63

Query: 203 MAVAKKKASKLDANKPKKPPTAFFYFLEDFRKDFQEQNPDVKSMREIGKACGEKWKIMTY 24
               K K  K DA KPKKPPTAFFYFLEDFRK+FQEQNPDVKSMRE+GKACGEKWK MTY
Sbjct: 64  SKTKKNK--KFDAKKPKKPPTAFFYFLEDFRKEFQEQNPDVKSMREVGKACGEKWKTMTY 121

Query: 23  EEKVQYY 3
           EEKV+YY
Sbjct: 122 EEKVKYY 128


>ref|XP_004134634.1| PREDICTED: high mobility group B protein 14-like [Cucumis sativus]
           gi|449505924|ref|XP_004162605.1| PREDICTED: high
           mobility group B protein 14-like [Cucumis sativus]
          Length = 161

 Score =  129 bits (325), Expect = 2e-28
 Identities = 66/120 (55%), Positives = 83/120 (69%), Gaps = 4/120 (3%)
 Frame = -3

Query: 350 SPSKYLAMAKIASGSAPAETP----KKTAHGKMAVRPRSKLTMKQSNTAKRPKMAVAKKK 183
           +P K  + +   S  A +E      K++ + K A +     T K++ T K+P  +  KKK
Sbjct: 6   NPQKSSSASARDSSEASSENTGLRVKRSENMKSAAKASRFNTDKRAKTIKKPN-SKQKKK 64

Query: 182 ASKLDANKPKKPPTAFFYFLEDFRKDFQEQNPDVKSMREIGKACGEKWKIMTYEEKVQYY 3
             K D NKPKKPPTAFFYFL+DFRK+FQEQNPDVK+MR++GKACGEKWK MTYEEKVQYY
Sbjct: 65  NDKFDVNKPKKPPTAFFYFLDDFRKEFQEQNPDVKTMRDVGKACGEKWKTMTYEEKVQYY 124


>ref|XP_002275908.1| PREDICTED: high mobility group B protein 14 [Vitis vinifera]
           gi|297740668|emb|CBI30850.3| unnamed protein product
           [Vitis vinifera]
          Length = 175

 Score =  128 bits (322), Expect = 4e-28
 Identities = 67/127 (52%), Positives = 82/127 (64%), Gaps = 22/127 (17%)
 Frame = -3

Query: 317 ASGSAPAETPKKTAHGKMAVR-----------------PRSKLTMKQSNTAKRPKM---- 201
           +S S+PA  P      KMA+R                  R+ +  + S   K+P+     
Sbjct: 13  SSVSSPATNPNTMTKEKMALRVTSTERMVLRVRSTEKIKRAVMESRVSEKEKKPRSGNKA 72

Query: 200 -AVAKKKASKLDANKPKKPPTAFFYFLEDFRKDFQEQNPDVKSMREIGKACGEKWKIMTY 24
            A  KK++ ++D+ KPKKPPTAFFYFLEDFRK+FQEQNPDVKSMR+IGKACGEKWK MTY
Sbjct: 73  KAKTKKRSQRVDSKKPKKPPTAFFYFLEDFRKEFQEQNPDVKSMRDIGKACGEKWKTMTY 132

Query: 23  EEKVQYY 3
           EEKVQYY
Sbjct: 133 EEKVQYY 139


Top