BLASTX nr result
ID: Atractylodes22_contig00019268
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00019268
(2135 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containi... 808 0.0
emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera] 803 0.0
ref|NP_566237.1| pentatricopeptide repeat-containing protein [Ar... 749 0.0
ref|XP_002521980.1| pentatricopeptide repeat-containing protein,... 747 0.0
ref|XP_002884468.1| pentatricopeptide repeat-containing protein ... 746 0.0
>ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 808 bits (2088), Expect = 0.0
Identities = 387/567 (68%), Positives = 475/567 (83%), Gaps = 2/567 (0%)
Frame = -2
Query: 2047 SAEFSPKCFPFNAHPNPTTNSHHHYSLITCTNPNPNR--SSGTPSNVKLTTNLKPAHLQS 1874
S +F P+C PFN PT++SHH S++TC NPNPN +S V ++ +PAHLQS
Sbjct: 5 STDFFPRCPPFNPQLKPTSHSHHT-SIVTCRNPNPNDGFNSRNAPKVGVSAEARPAHLQS 63
Query: 1873 YTYRETHFMKLLNRSCKTGKYDESLYFLEHMVGKGYKPDVILCTKLIKGFFNTKRVEKAI 1694
Y +RETH MKLLNRSCK GK++ESLYFLE +V KGY PDVILCTKLIKGFFN K +EKA
Sbjct: 64 YDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKAS 123
Query: 1693 KVIQILESHGEPDVFAYNAVISGFCKLNQIESANRVLDRMRNQGFSPDVVTYNILIGSLC 1514
+V++ILESH EPDVFAYNAVISGFCK+N+IE+A +VL+RM+ +GF PD+VTYNI+IGSLC
Sbjct: 124 RVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLC 183
Query: 1513 SRGKLGLAMKMLEQLLEDGCMPSVITYTILIEATILEGGINKAMKLLDEMLSRGLQPDMY 1334
+R KLGLA+K+L+QLL D CMP+VITYTILIEATI+EGGIN+AMKLL+EML+RGL PDMY
Sbjct: 184 NRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMY 243
Query: 1333 TYNAIIRGLCREGMMDEAFEFVRSLPSKGCKPDVISYNILLRALLNQGKWGAAERLMEEM 1154
TYNAIIRG+C+EGM++ A E + SL SKGCKPDVISYNILLRA LNQGKW E+L+ EM
Sbjct: 244 TYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEM 303
Query: 1153 FSRNCDLNTVTYSILISSLCRDGKVDEAMNLLKIMVESGLAPDAFTFDPLISAFCKEGRL 974
FSR C+ N VTYSILISSLCR G++DEA+++LK+M+E L PD +++DPLISA CKEGRL
Sbjct: 304 FSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRL 363
Query: 973 DVAIAFLDYMISNGCLPDIVNYNTVLSALCKNGNADEALQIFERLGETGCPPDVSTYNTM 794
D+AI +DYMISNGCLPDIVNYNT+L+ALCKNGNA++AL+IF +L GCPP+VS+YNTM
Sbjct: 364 DLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTM 423
Query: 793 ISALWNNKEREKALSMVSEMIMKGINPDEITYNALISCLCRDGMVDEAFRLLESMESSGF 614
ISALW+ +R +AL MV MI KG++PDEITYN+LISCLCRDG+V+EA LL+ ME SGF
Sbjct: 424 ISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGF 483
Query: 613 MPTVITYNIMLLGLCKAHRMDDAIRVLEEMVERGCQPNQTTYVLLVEGVGFSGRRAEAMY 434
PTVI+YNI+LLGLCK R+DDAI + EM+E+GC+PN+TTY+LL+EG+GF+G R EAM
Sbjct: 484 RPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAME 543
Query: 433 LGNSLFRMKAISEELFKRLKKTFPLPD 353
L NSLF IS++ FKRL KTFP+ D
Sbjct: 544 LANSLFSRDVISQDSFKRLNKTFPMLD 570
>emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 803 bits (2075), Expect = 0.0
Identities = 386/567 (68%), Positives = 473/567 (83%), Gaps = 2/567 (0%)
Frame = -2
Query: 2047 SAEFSPKCFPFNAHPNPTTNSHHHYSLITCTNPNPNR--SSGTPSNVKLTTNLKPAHLQS 1874
S +F P C PF+ PT++SHH S++TC NPNPN +S V ++ +PAHLQS
Sbjct: 15 STDFFPHCPPFSPQLKPTSHSHHT-SIVTCRNPNPNDGYNSRNSPKVGVSAEARPAHLQS 73
Query: 1873 YTYRETHFMKLLNRSCKTGKYDESLYFLEHMVGKGYKPDVILCTKLIKGFFNTKRVEKAI 1694
Y +RETH MKLLNRSCK GK++ESLYFLE +V KGY PDVILCTKLIKGFFN K +EKA
Sbjct: 74 YDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKAS 133
Query: 1693 KVIQILESHGEPDVFAYNAVISGFCKLNQIESANRVLDRMRNQGFSPDVVTYNILIGSLC 1514
+V++ILESH EPDVFAYNAVISGFCK+NQIE+A +VL+RM+ +GF PD+VTYNI+IGSLC
Sbjct: 134 RVMEILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLC 193
Query: 1513 SRGKLGLAMKMLEQLLEDGCMPSVITYTILIEATILEGGINKAMKLLDEMLSRGLQPDMY 1334
+R KLGLA+ +L+QLL D CMP+VITYTILIEATI+EGGIN+AMKLL+EML+RGL PDMY
Sbjct: 194 NRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMY 253
Query: 1333 TYNAIIRGLCREGMMDEAFEFVRSLPSKGCKPDVISYNILLRALLNQGKWGAAERLMEEM 1154
TYNAIIRG+C+EGM++ A E + SL SKGC+PDVISYNILLRA LNQGKW E+L+ EM
Sbjct: 254 TYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEM 313
Query: 1153 FSRNCDLNTVTYSILISSLCRDGKVDEAMNLLKIMVESGLAPDAFTFDPLISAFCKEGRL 974
FSR C+ N VTYSILISSLCR G++DEA+++LK+M+E L PD +++DPLISA CKEGRL
Sbjct: 314 FSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRL 373
Query: 973 DVAIAFLDYMISNGCLPDIVNYNTVLSALCKNGNADEALQIFERLGETGCPPDVSTYNTM 794
D+AI +DYMISNGCLPDIVNYNT+L+ALCKNGNA++AL+IF +L GCPP+VS+YNTM
Sbjct: 374 DLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTM 433
Query: 793 ISALWNNKEREKALSMVSEMIMKGINPDEITYNALISCLCRDGMVDEAFRLLESMESSGF 614
ISALW+ +R +AL MV MI KGI+PDEITYN+LISCLCRDG+V+EA LL+ ME SGF
Sbjct: 434 ISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGF 493
Query: 613 MPTVITYNIMLLGLCKAHRMDDAIRVLEEMVERGCQPNQTTYVLLVEGVGFSGRRAEAMY 434
PTVI+YNI+LLGLCK R+DDAI + EM+E+GC+PN+TTY+LL+EG+GF+G R EAM
Sbjct: 494 RPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAME 553
Query: 433 LGNSLFRMKAISEELFKRLKKTFPLPD 353
L NSLF IS++ FKRL KTFP+ D
Sbjct: 554 LANSLFSRDVISQDSFKRLNKTFPMLD 580
>ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein
[Arabidopsis thaliana] gi|15810359|gb|AAL07067.1| unknown
protein [Arabidopsis thaliana] gi|22136960|gb|AAM91709.1|
unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 749 bits (1933), Expect = 0.0
Identities = 360/568 (63%), Positives = 453/568 (79%), Gaps = 14/568 (2%)
Frame = -2
Query: 2020 PFNAHPNPTTNSHHHYSLITCTNPNPNRSSG--------------TPSNVKLTTNLKPAH 1883
P++ + SH+ SL+T +N NPN +G T ++ L T + H
Sbjct: 22 PYSNSSHGLLLSHNRSSLLTFSNSNPNNDNGRSFSSSGARNLQTTTTTDATLPTERRQQH 81
Query: 1882 LQSYTYRETHFMKLLNRSCKTGKYDESLYFLEHMVGKGYKPDVILCTKLIKGFFNTKRVE 1703
QS +R+T +K+ +RSC++G Y ESL+ LE MV KGY PDVILCTKLIKGFF + +
Sbjct: 82 SQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIP 141
Query: 1702 KAIKVIQILESHGEPDVFAYNAVISGFCKLNQIESANRVLDRMRNQGFSPDVVTYNILIG 1523
KA++V++ILE G+PDVFAYNA+I+GFCK+N+I+ A RVLDRMR++ FSPD VTYNI+IG
Sbjct: 142 KAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIG 201
Query: 1522 SLCSRGKLGLAMKMLEQLLEDGCMPSVITYTILIEATILEGGINKAMKLLDEMLSRGLQP 1343
SLCSRGKL LA+K+L QLL D C P+VITYTILIEAT+LEGG+++A+KL+DEMLSRGL+P
Sbjct: 202 SLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKP 261
Query: 1342 DMYTYNAIIRGLCREGMMDEAFEFVRSLPSKGCKPDVISYNILLRALLNQGKWGAAERLM 1163
DM+TYN IIRG+C+EGM+D AFE VR+L KGC+PDVISYNILLRALLNQGKW E+LM
Sbjct: 262 DMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLM 321
Query: 1162 EEMFSRNCDLNTVTYSILISSLCRDGKVDEAMNLLKIMVESGLAPDAFTFDPLISAFCKE 983
+MFS CD N VTYSILI++LCRDGK++EAMNLLK+M E GL PDA+++DPLI+AFC+E
Sbjct: 322 TKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCRE 381
Query: 982 GRLDVAIAFLDYMISNGCLPDIVNYNTVLSALCKNGNADEALQIFERLGETGCPPDVSTY 803
GRLDVAI FL+ MIS+GCLPDIVNYNTVL+ LCKNG AD+AL+IF +LGE GC P+ S+Y
Sbjct: 382 GRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSY 441
Query: 802 NTMISALWNNKEREKALSMVSEMIMKGINPDEITYNALISCLCRDGMVDEAFRLLESMES 623
NTM SALW++ ++ +AL M+ EM+ GI+PDEITYN++ISCLCR+GMVDEAF LL M S
Sbjct: 442 NTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRS 501
Query: 622 SGFMPTVITYNIMLLGLCKAHRMDDAIRVLEEMVERGCQPNQTTYVLLVEGVGFSGRRAE 443
F P+V+TYNI+LLG CKAHR++DAI VLE MV GC+PN+TTY +L+EG+GF+G RAE
Sbjct: 502 CEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAE 561
Query: 442 AMYLGNSLFRMKAISEELFKRLKKTFPL 359
AM L N L R+ AISE FKRL +TFPL
Sbjct: 562 AMELANDLVRIDAISEYSFKRLHRTFPL 589
>ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223538784|gb|EEF40384.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 584
Score = 747 bits (1928), Expect = 0.0
Identities = 353/569 (62%), Positives = 456/569 (80%), Gaps = 2/569 (0%)
Frame = -2
Query: 2053 MISAEFSPKCFPFNAHPNPTTNSHHHYSLITCTNPNPNRSSGT--PSNVKLTTNLKPAHL 1880
+ S EF P F P T++ H ++++C P N ++ P V+++ + H+
Sbjct: 3 LFSTEFLPHSISFTTQPLKPTSNSLHSTIVSCIRPELNDANKVRNPQKVRVSAETRQTHV 62
Query: 1879 QSYTYRETHFMKLLNRSCKTGKYDESLYFLEHMVGKGYKPDVILCTKLIKGFFNTKRVEK 1700
S+ ++E H MKLLNRSC+ GKY+ESLYFLE MV KGY PDVILCTKLIKGFFN++ + K
Sbjct: 63 LSFDFKEVHLMKLLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGK 122
Query: 1699 AIKVIQILESHGEPDVFAYNAVISGFCKLNQIESANRVLDRMRNQGFSPDVVTYNILIGS 1520
A +V++ILE +G+PDVFAYNA+ISGF K NQ+E+ANRVLDRM+++GF PDVVTYNI+IGS
Sbjct: 123 ATRVMEILERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGS 182
Query: 1519 LCSRGKLGLAMKMLEQLLEDGCMPSVITYTILIEATILEGGINKAMKLLDEMLSRGLQPD 1340
CSRGKL LA+++ E+LL+D C P+VITYTILIEATIL+GGI+ AMKLLDEMLS+GL+PD
Sbjct: 183 FCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPD 242
Query: 1339 MYTYNAIIRGLCREGMMDEAFEFVRSLPSKGCKPDVISYNILLRALLNQGKWGAAERLME 1160
TYNAIIRG+C+E M+D+AFE +RSL S+GCKPD+I+YNILLR LL++GKW E+L+
Sbjct: 243 TLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLIS 302
Query: 1159 EMFSRNCDLNTVTYSILISSLCRDGKVDEAMNLLKIMVESGLAPDAFTFDPLISAFCKEG 980
EM S C N VT+SILI +LCRDGKV+EA+NLL+ M E GL PDA+ +DPLI+ FC+EG
Sbjct: 303 EMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREG 362
Query: 979 RLDVAIAFLDYMISNGCLPDIVNYNTVLSALCKNGNADEALQIFERLGETGCPPDVSTYN 800
RLD+A FL+YMIS+GCLPDIVNYNT+++ LC+ G AD+AL++FE+L E GCPP+VS+YN
Sbjct: 363 RLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYN 422
Query: 799 TMISALWNNKEREKALSMVSEMIMKGINPDEITYNALISCLCRDGMVDEAFRLLESMESS 620
T+ SALW++ +R +AL M+ +++ +GI+PDEITYN+LISCLCRDGMVDEA LL M+S
Sbjct: 423 TLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSG 482
Query: 619 GFMPTVITYNIMLLGLCKAHRMDDAIRVLEEMVERGCQPNQTTYVLLVEGVGFSGRRAEA 440
+ P V++YNI+LLGLCK +R +DAI VL M E+GCQPN+TTY+LL+EG+GFSG RAEA
Sbjct: 483 RYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEA 542
Query: 439 MYLGNSLFRMKAISEELFKRLKKTFPLPD 353
M L NSL M AISE+ F RL KTFPL D
Sbjct: 543 MELANSLHGMNAISEDSFNRLNKTFPLLD 571
>ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297330308|gb|EFH60727.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 598
Score = 746 bits (1927), Expect = 0.0
Identities = 357/563 (63%), Positives = 452/563 (80%), Gaps = 13/563 (2%)
Frame = -2
Query: 2008 HPNPTTNSHHHYSLITCTNPNPNRSSG-------------TPSNVKLTTNLKPAHLQSYT 1868
+ N + H+ SL+T +N NPN +G T ++ + T + H QS
Sbjct: 23 YSNSSHGLSHNRSLLTFSNSNPNHDNGKSFSSSGARNLQATTTDAAIPTERRQQHSQSLG 82
Query: 1867 YRETHFMKLLNRSCKTGKYDESLYFLEHMVGKGYKPDVILCTKLIKGFFNTKRVEKAIKV 1688
+R+T +K+ +RSC++G Y ESL+ LE MV KGY PDVILCTKLIKGFF + V KA++V
Sbjct: 83 FRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRV 142
Query: 1687 IQILESHGEPDVFAYNAVISGFCKLNQIESANRVLDRMRNQGFSPDVVTYNILIGSLCSR 1508
++ILE G+PDVFAYNA+I+GFCK+N+I+ A RVLDRMR++ FSPD VTYNI+IGSLCSR
Sbjct: 143 MEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSR 202
Query: 1507 GKLGLAMKMLEQLLEDGCMPSVITYTILIEATILEGGINKAMKLLDEMLSRGLQPDMYTY 1328
GKL LA+K+L+QLL D C P+VITYTILIEAT+LEGG+++A+KLLDEMLSRGL+PDM+TY
Sbjct: 203 GKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTY 262
Query: 1327 NAIIRGLCREGMMDEAFEFVRSLPSKGCKPDVISYNILLRALLNQGKWGAAERLMEEMFS 1148
N IIRG+C+EGM+D AFE +R+L KGC+PDVISYNILLRALLNQGKW E+LM +MFS
Sbjct: 263 NTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 322
Query: 1147 RNCDLNTVTYSILISSLCRDGKVDEAMNLLKIMVESGLAPDAFTFDPLISAFCKEGRLDV 968
CD N VTYSILI++LCRDGK++EAMNLLK+M E GL PDA+++DPLI+AFC+EGRLDV
Sbjct: 323 EKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDV 382
Query: 967 AIAFLDYMISNGCLPDIVNYNTVLSALCKNGNADEALQIFERLGETGCPPDVSTYNTMIS 788
AI FL+ MIS+GCLPDIVNYNTVL+ LCKNG AD+AL+IF +LGE GC P+ S+YNTM S
Sbjct: 383 AIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFS 442
Query: 787 ALWNNKEREKALSMVSEMIMKGINPDEITYNALISCLCRDGMVDEAFRLLESMESSGFMP 608
ALW++ ++ +AL M+ EM+ GI+PDEITYN++ISCLCR+GMVD+AF LL M S F P
Sbjct: 443 ALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHP 502
Query: 607 TVITYNIMLLGLCKAHRMDDAIRVLEEMVERGCQPNQTTYVLLVEGVGFSGRRAEAMYLG 428
+V+TYNI+LLG CKAHR++DAI VL+ MV GC+PN+TTY +L+EG+GF+G RAEAM L
Sbjct: 503 SVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELA 562
Query: 427 NSLFRMKAISEELFKRLKKTFPL 359
N L R+ AISE FKRL +TFPL
Sbjct: 563 NDLVRINAISEYSFKRLHRTFPL 585