BLASTX nr result

ID: Atractylodes22_contig00019252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00019252
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34744.3| unnamed protein product [Vitis vinifera]               76   1e-21
ref|XP_002282844.1| PREDICTED: F-box protein PP2-A12 [Vitis vini...    76   1e-21
ref|XP_002298062.1| f-box family protein [Populus trichocarpa] g...    68   3e-21
ref|XP_002304470.1| f-box family protein [Populus trichocarpa] g...    66   9e-20
ref|XP_002320090.1| f-box family protein [Populus trichocarpa] g...    71   1e-19

>emb|CBI34744.3| unnamed protein product [Vitis vinifera]
          Length = 309

 Score = 76.3 bits (186), Expect(2) = 1e-21
 Identities = 35/56 (62%), Positives = 41/56 (73%)
 Frame = -3

Query: 170 SSAEFVWESKLPKNYDLIISRVFDNNKFSSTLCKKEIYSRLSRPNPIDGGTKKVWL 3
           S A+ VWE KLP NY L+I +VF +  F   LCKKEIY+RL +PNP DGGTKK WL
Sbjct: 55  SRADLVWEPKLPSNYCLVIEKVFKD--FPENLCKKEIYARLCQPNPFDGGTKKAWL 108



 Score = 52.0 bits (123), Expect(2) = 1e-21
 Identities = 26/38 (68%), Positives = 27/38 (71%)
 Frame = -2

Query: 363 SEPGLGDLPESVVGSVLVYLSPQEICRLAALNRAFRCA 250
           S P LGDLPE  V  VL YL P EIC+LA LNRAFR A
Sbjct: 17  SRPRLGDLPEDCVALVLSYLDPPEICKLAKLNRAFRGA 54


>ref|XP_002282844.1| PREDICTED: F-box protein PP2-A12 [Vitis vinifera]
          Length = 283

 Score = 76.3 bits (186), Expect(2) = 1e-21
 Identities = 35/56 (62%), Positives = 41/56 (73%)
 Frame = -3

Query: 170 SSAEFVWESKLPKNYDLIISRVFDNNKFSSTLCKKEIYSRLSRPNPIDGGTKKVWL 3
           S A+ VWE KLP NY L+I +VF +  F   LCKKEIY+RL +PNP DGGTKK WL
Sbjct: 55  SRADLVWEPKLPSNYCLVIEKVFKD--FPENLCKKEIYARLCQPNPFDGGTKKAWL 108



 Score = 52.0 bits (123), Expect(2) = 1e-21
 Identities = 26/38 (68%), Positives = 27/38 (71%)
 Frame = -2

Query: 363 SEPGLGDLPESVVGSVLVYLSPQEICRLAALNRAFRCA 250
           S P LGDLPE  V  VL YL P EIC+LA LNRAFR A
Sbjct: 17  SRPRLGDLPEDCVALVLSYLDPPEICKLAKLNRAFRGA 54


>ref|XP_002298062.1| f-box family protein [Populus trichocarpa]
           gi|222845320|gb|EEE82867.1| f-box family protein
           [Populus trichocarpa]
          Length = 299

 Score = 67.8 bits (164), Expect(2) = 3e-21
 Identities = 32/56 (57%), Positives = 39/56 (69%)
 Frame = -3

Query: 170 SSAEFVWESKLPKNYDLIISRVFDNNKFSSTLCKKEIYSRLSRPNPIDGGTKKVWL 3
           S A+FVWESKLP NY+ +I RVF +      LCK+E+Y+RL R N  D GTKK WL
Sbjct: 70  SWADFVWESKLPVNYEDLIERVFGDG-LEDKLCKREVYTRLCRANTFDDGTKKAWL 124



 Score = 58.9 bits (141), Expect(2) = 3e-21
 Identities = 30/44 (68%), Positives = 32/44 (72%)
 Frame = -2

Query: 381 SAPTALSEPGLGDLPESVVGSVLVYLSPQEICRLAALNRAFRCA 250
           S P    +PGLGDLPES V  VL YL+P EICRLA LNRAFR A
Sbjct: 26  SPPPPRIKPGLGDLPESCVALVLEYLNPSEICRLAKLNRAFRGA 69


>ref|XP_002304470.1| f-box family protein [Populus trichocarpa]
           gi|222841902|gb|EEE79449.1| f-box family protein
           [Populus trichocarpa]
          Length = 298

 Score = 66.2 bits (160), Expect(2) = 9e-20
 Identities = 32/56 (57%), Positives = 39/56 (69%)
 Frame = -3

Query: 170 SSAEFVWESKLPKNYDLIISRVFDNNKFSSTLCKKEIYSRLSRPNPIDGGTKKVWL 3
           S A+FVWESKLP NY+ +I RV  ++     LCK+EIY+RL R N  D GTKK WL
Sbjct: 69  SWADFVWESKLPVNYEDLIGRVLGDD-LKDKLCKREIYTRLCRANAFDDGTKKAWL 123



 Score = 55.5 bits (132), Expect(2) = 9e-20
 Identities = 28/44 (63%), Positives = 34/44 (77%)
 Frame = -2

Query: 381 SAPTALSEPGLGDLPESVVGSVLVYLSPQEICRLAALNRAFRCA 250
           S+P A ++P LGDLPE  V  +L YL+PQEIC+LA LNRAFR A
Sbjct: 26  SSPPA-TKPSLGDLPEGCVALILEYLNPQEICKLARLNRAFRGA 68


>ref|XP_002320090.1| f-box family protein [Populus trichocarpa]
           gi|222860863|gb|EEE98405.1| f-box family protein
           [Populus trichocarpa]
          Length = 294

 Score = 71.2 bits (173), Expect(2) = 1e-19
 Identities = 33/56 (58%), Positives = 41/56 (73%)
 Frame = -3

Query: 170 SSAEFVWESKLPKNYDLIISRVFDNNKFSSTLCKKEIYSRLSRPNPIDGGTKKVWL 3
           SSA+F+WESKLP NY  I  +V D  K    L KK++Y+R+ RPNP DGGTK+VWL
Sbjct: 58  SSADFIWESKLPSNYKFICEKVLDE-KTVVGLEKKDVYARMCRPNPFDGGTKEVWL 112



 Score = 49.7 bits (117), Expect(2) = 1e-19
 Identities = 24/49 (48%), Positives = 34/49 (69%)
 Frame = -2

Query: 396 CNSTTSAPTALSEPGLGDLPESVVGSVLVYLSPQEICRLAALNRAFRCA 250
           C++    P+  S+P LGD+PES +  VL++L P +IC+LA LNRAF  A
Sbjct: 11  CDTNGEGPS--SKPRLGDIPESCLALVLMHLDPPDICKLARLNRAFHGA 57


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