BLASTX nr result

ID: Atractylodes22_contig00019244 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00019244
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521639.1| geranylgeranyl hydrogenase, putative [Ricinu...   140   8e-32
ref|XP_002273133.1| PREDICTED: geranylgeranyl diphosphate reduct...   136   2e-30
ref|XP_003519480.1| PREDICTED: geranylgeranyl diphosphate reduct...   132   4e-29
ref|XP_003617078.1| Geranylgeranyl reductase [Medicago truncatul...   128   5e-28
ref|XP_002312852.1| predicted protein [Populus trichocarpa] gi|2...   125   4e-27

>ref|XP_002521639.1| geranylgeranyl hydrogenase, putative [Ricinus communis]
           gi|223539151|gb|EEF40746.1| geranylgeranyl hydrogenase,
           putative [Ricinus communis]
          Length = 451

 Score =  140 bits (354), Expect = 8e-32
 Identities = 67/93 (72%), Positives = 82/93 (88%), Gaps = 1/93 (1%)
 Frame = +3

Query: 3   VLDSYLRSRAESKGTTLLKALVTKLDVPTSPNQPYIIHYTVNNTIKS-LSVDVVVGADGA 179
           VLDS+LRSR +SKG TL++ LV  +D+P+ P +PYIIH+ +NN IK  L+VDVV+GADGA
Sbjct: 138 VLDSFLRSRVQSKGATLIQGLVMHIDIPSLPKEPYIIHHIINNNIKGELAVDVVIGADGA 197

Query: 180 NSRVAKSIHAGDYACAIAFQERIRLPDDKMEYY 278
           NSRVAKSI+AG+Y+CAIAFQERIRLPDDKMEYY
Sbjct: 198 NSRVAKSINAGNYSCAIAFQERIRLPDDKMEYY 230


>ref|XP_002273133.1| PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic
           [Vitis vinifera]
          Length = 466

 Score =  136 bits (342), Expect = 2e-30
 Identities = 65/92 (70%), Positives = 77/92 (83%)
 Frame = +3

Query: 3   VLDSYLRSRAESKGTTLLKALVTKLDVPTSPNQPYIIHYTVNNTIKSLSVDVVVGADGAN 182
           VLDS+LR RAES G T + ALVT LD+P+SP  PY+IHY    +  SL+VDVV+GADGAN
Sbjct: 154 VLDSFLRRRAESAGATAITALVTSLDLPSSPASPYVIHYNAGGSRHSLAVDVVIGADGAN 213

Query: 183 SRVAKSIHAGDYACAIAFQERIRLPDDKMEYY 278
           SRVAKSI AGDY+CAIAFQERI+LP++KMEYY
Sbjct: 214 SRVAKSIKAGDYSCAIAFQERIKLPEEKMEYY 245


>ref|XP_003519480.1| PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic-like
           [Glycine max]
          Length = 448

 Score =  132 bits (331), Expect = 4e-29
 Identities = 64/93 (68%), Positives = 77/93 (82%), Gaps = 1/93 (1%)
 Frame = +3

Query: 3   VLDSYLRSRAESKGTTLLKALVTKLDVPTSPNQPYIIHYTVNNTIK-SLSVDVVVGADGA 179
           VLDS+LRSRA + G T +  LVT LD+P SP+ PY +HYT N + + SL+VDVV+GADGA
Sbjct: 135 VLDSFLRSRAHAAGATAISGLVTALDLPASPDAPYTVHYTANGSSRRSLAVDVVIGADGA 194

Query: 180 NSRVAKSIHAGDYACAIAFQERIRLPDDKMEYY 278
           NSRVAK+I AGDYACAIAFQERI+LPD+KM YY
Sbjct: 195 NSRVAKAIGAGDYACAIAFQERIKLPDEKMAYY 227


>ref|XP_003617078.1| Geranylgeranyl reductase [Medicago truncatula]
           gi|355518413|gb|AET00037.1| Geranylgeranyl reductase
           [Medicago truncatula]
          Length = 450

 Score =  128 bits (321), Expect = 5e-28
 Identities = 66/93 (70%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
 Frame = +3

Query: 3   VLDSYLRSRAESKGTTLLKALVTKLDVPTSPNQPYIIHYTVNNTIK-SLSVDVVVGADGA 179
           VLDS+LRSRA S G   +  LVT LDVPTSPN PY I+YT   + K SL+VDVV+GADGA
Sbjct: 137 VLDSFLRSRAVSAGAEHISGLVTSLDVPTSPNSPYTINYTNKTSSKNSLAVDVVIGADGA 196

Query: 180 NSRVAKSIHAGDYACAIAFQERIRLPDDKMEYY 278
           NSRVAKSI AGDY CAIAFQERI+L D+KM+YY
Sbjct: 197 NSRVAKSISAGDYTCAIAFQERIKLSDEKMKYY 229


>ref|XP_002312852.1| predicted protein [Populus trichocarpa] gi|222849260|gb|EEE86807.1|
           predicted protein [Populus trichocarpa]
          Length = 454

 Score =  125 bits (314), Expect = 4e-27
 Identities = 60/93 (64%), Positives = 78/93 (83%), Gaps = 1/93 (1%)
 Frame = +3

Query: 3   VLDSYLRSRAESKGTTLLKALVTKLDVPTS-PNQPYIIHYTVNNTIKSLSVDVVVGADGA 179
           VLDS+LRSRA+S G   +  LVT ++VP    ++PY+IH+T+NN  +SL+VD++VGADGA
Sbjct: 141 VLDSFLRSRAQSNGAQFITGLVTDIEVPDFLSSKPYVIHHTINNCKRSLAVDLIVGADGA 200

Query: 180 NSRVAKSIHAGDYACAIAFQERIRLPDDKMEYY 278
           NSRVAK I+AG+Y CAIAFQERI+LPD+KMEYY
Sbjct: 201 NSRVAKIINAGNYRCAIAFQERIKLPDEKMEYY 233


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