BLASTX nr result

ID: Atractylodes22_contig00019237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00019237
         (982 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF82236.1|AC069143_12 Contains similarity to a transposable ...   170   6e-40
ref|NP_173360.1| TTF-type zinc finger protein with HAT dimerizat...   170   6e-40
ref|NP_189621.1| General transcription factor 2-related zinc fin...   161   3e-37
ref|NP_001173058.1| Os02g0599175 [Oryza sativa Japonica Group] g...   148   2e-33
ref|XP_002437087.1| hypothetical protein SORBIDRAFT_10g021010 [S...   145   1e-32

>gb|AAF82236.1|AC069143_12 Contains similarity to a transposable element Tip100 protein for
            transposase from Ipomoea purpurea gb|4063769 and is a
            member of the transmembrane 4 family PF|00335
            [Arabidopsis thaliana]
          Length = 811

 Score =  170 bits (430), Expect = 6e-40
 Identities = 89/164 (54%), Positives = 109/164 (66%)
 Frame = -2

Query: 981  DRFSEVSSELLICMGALNPCDSFCDFDSSKLLRFCELYPDDFSIVDKMTLDHELDLYVAN 802
            DRF EV+SELLICM +L+P DSF  FD S L+R  E YPDDFS V++ +LDH+L++Y+ N
Sbjct: 645  DRFDEVNSELLICMSSLSPIDSFRQFDKSMLVRLTEFYPDDFSFVERRSLDHQLEIYLDN 704

Query: 801  VKADGRFAKLKGISDLARVMTDTRKRDVFPXXXXXXXXXXXXXXXXASVGRCFSAMKLVK 622
            VK D RF  LK + DLARVM +TRK    P                A+V RCFSAM  VK
Sbjct: 705  VKNDERFTDLKCLGDLARVMVETRKHLSHPLVYRLLKVSLILPVATATVERCFSAMNFVK 764

Query: 621  SDLCNRIADDFLNDCVICAIEREALAKVTNEDVIIRFQKMKTRR 490
            + L NRI D FL+DC++C IE++AL  VTNE VI RFQ M  RR
Sbjct: 765  TTLRNRIGDMFLSDCLVCFIEKQALNTVTNESVIKRFQDMSERR 808


>ref|NP_173360.1| TTF-type zinc finger protein with HAT dimerization domain
            [Arabidopsis thaliana] gi|332191703|gb|AEE29824.1|
            TTF-type zinc finger protein with HAT dimerization domain
            [Arabidopsis thaliana]
          Length = 769

 Score =  170 bits (430), Expect = 6e-40
 Identities = 89/164 (54%), Positives = 109/164 (66%)
 Frame = -2

Query: 981  DRFSEVSSELLICMGALNPCDSFCDFDSSKLLRFCELYPDDFSIVDKMTLDHELDLYVAN 802
            DRF EV+SELLICM +L+P DSF  FD S L+R  E YPDDFS V++ +LDH+L++Y+ N
Sbjct: 603  DRFDEVNSELLICMSSLSPIDSFRQFDKSMLVRLTEFYPDDFSFVERRSLDHQLEIYLDN 662

Query: 801  VKADGRFAKLKGISDLARVMTDTRKRDVFPXXXXXXXXXXXXXXXXASVGRCFSAMKLVK 622
            VK D RF  LK + DLARVM +TRK    P                A+V RCFSAM  VK
Sbjct: 663  VKNDERFTDLKCLGDLARVMVETRKHLSHPLVYRLLKVSLILPVATATVERCFSAMNFVK 722

Query: 621  SDLCNRIADDFLNDCVICAIEREALAKVTNEDVIIRFQKMKTRR 490
            + L NRI D FL+DC++C IE++AL  VTNE VI RFQ M  RR
Sbjct: 723  TTLRNRIGDMFLSDCLVCFIEKQALNTVTNESVIKRFQDMSERR 766


>ref|NP_189621.1| General transcription factor 2-related zinc finger protein
           [Arabidopsis thaliana] gi|332644086|gb|AEE77607.1|
           General transcription factor 2-related zinc finger
           protein [Arabidopsis thaliana]
          Length = 536

 Score =  161 bits (407), Expect = 3e-37
 Identities = 84/164 (51%), Positives = 106/164 (64%)
 Frame = -2

Query: 981 DRFSEVSSELLICMGALNPCDSFCDFDSSKLLRFCELYPDDFSIVDKMTLDHELDLYVAN 802
           D F E++SELLICM +L+P DSF  FD S L+R  E YPDDFS V++ +LDH+L++Y+ N
Sbjct: 370 DCFDELNSELLICMSSLSPIDSFRQFDKSMLVRLTEFYPDDFSFVERRSLDHQLEIYLDN 429

Query: 801 VKADGRFAKLKGISDLARVMTDTRKRDVFPXXXXXXXXXXXXXXXXASVGRCFSAMKLVK 622
           VK D RF  L+ + DLARVM +TRK    P                A+V RCFSAM  VK
Sbjct: 430 VKNDERFTDLEHLGDLARVMVETRKHLSHPLVYRLLKLSLILPVATATVVRCFSAMNFVK 489

Query: 621 SDLCNRIADDFLNDCVICAIEREALAKVTNEDVIIRFQKMKTRR 490
           + L NR  D FL+DC++C IE++ L  VTNE VI RFQ M  RR
Sbjct: 490 TTLRNRFGDVFLSDCLVCFIEKQVLNTVTNESVIKRFQDMSERR 533


>ref|NP_001173058.1| Os02g0599175 [Oryza sativa Japonica Group]
            gi|255671057|dbj|BAH91787.1| Os02g0599175 [Oryza sativa
            Japonica Group]
          Length = 685

 Score =  148 bits (374), Expect = 2e-33
 Identities = 74/163 (45%), Positives = 108/163 (66%)
 Frame = -2

Query: 981  DRFSEVSSELLICMGALNPCDSFCDFDSSKLLRFCELYPDDFSIVDKMTLDHELDLYVAN 802
            +RFSE SS+LLIC  A +P DSF DF+   L+   +LYP DF+  +   L H+L LY+A+
Sbjct: 518  NRFSETSSQLLICSSAFSPRDSFHDFNLENLMSLAKLYPSDFNSGNLRDLSHQLGLYIAD 577

Query: 801  VKADGRFAKLKGISDLARVMTDTRKRDVFPXXXXXXXXXXXXXXXXASVGRCFSAMKLVK 622
            V+ DGRF+ ++ I++L+++M +TRK   +P                A+V RCFSAMK VK
Sbjct: 578  VRDDGRFSNIQTIAELSQIMVETRKHLCYPLVYQLLKLVLVLPVATATVERCFSAMKNVK 637

Query: 621  SDLCNRIADDFLNDCVICAIEREALAKVTNEDVIIRFQKMKTR 493
            + LCN+I D++L+D +IC +E+E + KVTNE V+ RF KM+ R
Sbjct: 638  TYLCNKIGDEYLSDSLICYVEKEEMKKVTNEAVVRRFMKMQGR 680


>ref|XP_002437087.1| hypothetical protein SORBIDRAFT_10g021010 [Sorghum bicolor]
            gi|241915310|gb|EER88454.1| hypothetical protein
            SORBIDRAFT_10g021010 [Sorghum bicolor]
          Length = 778

 Score =  145 bits (366), Expect = 1e-32
 Identities = 73/163 (44%), Positives = 104/163 (63%)
 Frame = -2

Query: 978  RFSEVSSELLICMGALNPCDSFCDFDSSKLLRFCELYPDDFSIVDKMTLDHELDLYVANV 799
            RF++ SS+LL+C  + +P DSFCDF   KLL   +LYP DF   D   L +EL LY+++V
Sbjct: 612  RFNDTSSQLLVCSASFSPRDSFCDFSVDKLLSLAKLYPHDFDSGDLRDLSNELGLYISDV 671

Query: 798  KADGRFAKLKGISDLARVMTDTRKRDVFPXXXXXXXXXXXXXXXXASVGRCFSAMKLVKS 619
            + D RF+ ++ I++L++ M  TRK D +P                A+V   FS MK+VK+
Sbjct: 672  RDDDRFSSIETIAELSQKMVQTRKHDRYPLVYRLMRLVLVLPVATATVEIIFSGMKIVKT 731

Query: 618  DLCNRIADDFLNDCVICAIEREALAKVTNEDVIIRFQKMKTRR 490
            DL NRI D F+++C+IC IE+E + K+TNE VI RF KM+ RR
Sbjct: 732  DLRNRIGDQFMSNCLICYIEKEEMMKITNEAVIRRFMKMRERR 774


Top