BLASTX nr result

ID: Atractylodes22_contig00019217 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00019217
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311608.1| chromatin remodeling complex subunit [Populu...    64   1e-08
ref|XP_002884551.1| predicted protein [Arabidopsis lyrata subsp....    60   2e-07
ref|XP_002281240.2| PREDICTED: transcription regulatory protein ...    56   4e-06
emb|CBI26213.3| unnamed protein product [Vitis vinifera]               56   4e-06
emb|CAN75986.1| hypothetical protein VITISV_012191 [Vitis vinifera]    56   4e-06

>ref|XP_002311608.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222851428|gb|EEE88975.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1131

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/52 (57%), Positives = 40/52 (76%)
 Frame = +3

Query: 54  SSSSLPDDHIDNTKTLICALSFLSRNLPLPPDVFDAVSSIYTTAAAEEGDGG 209
           S+SS  +DH+  TK+LI AL+F+SR+LPLPPD+FD VSSIY+     + DGG
Sbjct: 17  STSSTLEDHVQKTKSLISALNFVSRDLPLPPDLFDTVSSIYSDDGNADFDGG 68


>ref|XP_002884551.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297330391|gb|EFH60810.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1130

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/67 (41%), Positives = 43/67 (64%)
 Frame = +3

Query: 48  QQSSSSLPDDHIDNTKTLICALSFLSRNLPLPPDVFDAVSSIYTTAAAEEGDGGVDSAAP 227
           Q+   +  +D ++ TK+LICA++++SR+LPLPP +F AVSSIY  A++   D  V    P
Sbjct: 7   QERCGNSQEDPVETTKSLICAVNYISRDLPLPPHLFAAVSSIYHGASSSLSDSDVSPPLP 66

Query: 228 GGSDGDN 248
               G+N
Sbjct: 67  TSPPGNN 73


>ref|XP_002281240.2| PREDICTED: transcription regulatory protein SNF2-like [Vitis
           vinifera]
          Length = 1114

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = +3

Query: 75  DHIDNTKTLICALSFLSRNLPLPPDVFDAVSSIY 176
           D +   KTLICAL+ +SRNLPLPPDVF+AVSSIY
Sbjct: 12  DPVQKAKTLICALNLISRNLPLPPDVFNAVSSIY 45


>emb|CBI26213.3| unnamed protein product [Vitis vinifera]
          Length = 1110

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = +3

Query: 75  DHIDNTKTLICALSFLSRNLPLPPDVFDAVSSIY 176
           D +   KTLICAL+ +SRNLPLPPDVF+AVSSIY
Sbjct: 12  DPVQKAKTLICALNLISRNLPLPPDVFNAVSSIY 45


>emb|CAN75986.1| hypothetical protein VITISV_012191 [Vitis vinifera]
          Length = 568

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = +3

Query: 75  DHIDNTKTLICALSFLSRNLPLPPDVFDAVSSIY 176
           D +   KTLICAL+ +SRNLPLPPDVF+AVSSIY
Sbjct: 12  DPVQKAKTLICALNLISRNLPLPPDVFNAVSSIY 45


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