BLASTX nr result

ID: Atractylodes22_contig00019201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00019201
         (1363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67425.1| hypothetical protein VITISV_006652 [Vitis vinifera]   270   8e-70
emb|CBI19029.3| unnamed protein product [Vitis vinifera]              243   1e-61
ref|XP_002513798.1| hypothetical protein RCOM_1032100 [Ricinus c...   204   4e-50
ref|XP_003589591.1| Replication factor C large subunit [Medicago...   176   1e-41
ref|XP_004172956.1| PREDICTED: uncharacterized LOC101216488, par...   172   2e-40

>emb|CAN67425.1| hypothetical protein VITISV_006652 [Vitis vinifera]
          Length = 1170

 Score =  270 bits (689), Expect = 8e-70
 Identities = 164/376 (43%), Positives = 226/376 (60%), Gaps = 9/376 (2%)
 Frame = -1

Query: 1363 CKSGDVSCVPESSYVPETEVENGTMMCSTMDSSGCVDGGIEEAPTSTDCAPKTIPVEFSS 1184
            CKS D+S VPESS+VPETE+ +GT + S   S G V    E      D     + VE  +
Sbjct: 789  CKSFDISRVPESSFVPETEMSDGTELLSVALSCGRVADIAETVSICNDLTQNLLQVEAKN 848

Query: 1183 LDYSCEEDKVPVMAVRDLGVDTAPVHGEEIGESHIEPTEALPREYQMMDECSRIDFCKKA 1004
                  E  VP ++     +       EE+G+S  E  E++ REY +MDECSR+ F   +
Sbjct: 849  -----PEKSVPGLSQNLETMINGDSVNEEVGDSQNEHVESVTREYPVMDECSRMAFTIGS 903

Query: 1003 EXXXXXXXXXXXXPVASIDLVQETWSRLRNCDSELRQYVSTEEKDILEALGVSYGMTNLI 824
            +                 + VQETW +LR C ++LR+Y   E++D  + + ++Y M+NLI
Sbjct: 904  KSLEDPRSWMVT------NSVQETWRKLRGCHTDLRRYAILEQRDASQIVELTYKMSNLI 957

Query: 823  SEADLLLADCQLLTCDYLKPSLVST-EKSHSFSWHDDQLQMASTIAQHGFCLYAKRSVAA 647
            SEAD L  +C  L  D L  S V   E+SH+FSW+D+QLQMASTIAQHGFC Y+K   AA
Sbjct: 958  SEADQLRYNCHPLDSDSLDLSAVPCGEESHAFSWYDEQLQMASTIAQHGFCFYSKYIAAA 1017

Query: 646  GSIA----RMDLAWEMLAASTNAISLGKL----INQNNRTVKSFGKKMLQSGVSSKSMLE 491
            GSI      +DLA EMLA++TN ++LGKL    +  N  + K    ++ +S +S +S  E
Sbjct: 1018 GSILGSDYMVDLASEMLASTTNTMALGKLTRPEMRMNWTSRKGVQMEVPKSDISLRSETE 1077

Query: 490  SPVCSTVQSIVPLRSQLSLKGYVFHEYLSSLAQISRSETCRLSEAVNKSNQRRKRVARNY 311
              +C+ VQS+VP +S L +KG+ FHEYLSSL+QISRSE  RLSE +N++ +RR R +R+Y
Sbjct: 1078 PCLCNIVQSVVPSKSYLGVKGHAFHEYLSSLSQISRSEASRLSENINQNKRRRGRASRHY 1137

Query: 310  LGNGALALSAEDISLL 263
            L  GA  LS +DISLL
Sbjct: 1138 LSTGACMLSPDDISLL 1153


>emb|CBI19029.3| unnamed protein product [Vitis vinifera]
          Length = 919

 Score =  243 bits (619), Expect = 1e-61
 Identities = 150/368 (40%), Positives = 205/368 (55%), Gaps = 1/368 (0%)
 Frame = -1

Query: 1363 CKSGDVSCVPESSYVPETEVENGTMMCSTMDSSGCVDGGIEEAPTSTDCAPKTIPVEFSS 1184
            CKS D+S VPESS+VPETE+ +GT + S   S G V    E      D     + VE  +
Sbjct: 574  CKSFDISQVPESSFVPETEMSDGTELLSVALSCGRVADIAETVSICNDLTQNLLQVEAKN 633

Query: 1183 LDYSCEEDKVPVMAVRDLGVDTAPVHGEEIGESHIEPTEALPREYQMMDECSRIDFCKKA 1004
                  E  VP ++     +       EE+G+S  E  E++ REY +MDECSR+ F + +
Sbjct: 634  -----PEKSVPGLSQNLETMINGDSVNEEVGDSQNEHVESVTREYPVMDECSRMAFTRGS 688

Query: 1003 EXXXXXXXXXXXXPVASIDLVQETWSRLRNCDSELRQYVSTEEKDILEALGVSYGMTNLI 824
            +                 + VQETW +L  C ++LR+Y   E++D  + + ++Y M+NLI
Sbjct: 689  KSLEDPRSWMVT------NSVQETWRKLCGCHTDLRRYAILEQRDASQIVELTYKMSNLI 742

Query: 823  SEADLLLADCQLLTCDYLKPSLVST-EKSHSFSWHDDQLQMASTIAQHGFCLYAKRSVAA 647
            SEAD L  +C  L  D L  S V   E+SH+FSW+D+QLQMASTIAQHGFC Y+K   AA
Sbjct: 743  SEADQLRYNCHPLDSDSLDLSTVPCGEESHAFSWYDEQLQMASTIAQHGFCFYSKYIAAA 802

Query: 646  GSIARMDLAWEMLAASTNAISLGKLINQNNRTVKSFGKKMLQSGVSSKSMLESPVCSTVQ 467
            GSI   D   E+                             +S +S +S  E  +C+ VQ
Sbjct: 803  GSILGSDYTMEVP----------------------------KSDISLRSETEPCLCNIVQ 834

Query: 466  SIVPLRSQLSLKGYVFHEYLSSLAQISRSETCRLSEAVNKSNQRRKRVARNYLGNGALAL 287
            S+VP +S L +KG+ FHEYLSSL+QISRSE  RLSE +N++ +RR R +R+YL  GA  L
Sbjct: 835  SVVPSKSYLGVKGHAFHEYLSSLSQISRSEASRLSENINQNKRRRARASRHYLSTGACML 894

Query: 286  SAEDISLL 263
            S +DISLL
Sbjct: 895  SPDDISLL 902


>ref|XP_002513798.1| hypothetical protein RCOM_1032100 [Ricinus communis]
            gi|223546884|gb|EEF48381.1| hypothetical protein
            RCOM_1032100 [Ricinus communis]
          Length = 1247

 Score =  204 bits (519), Expect = 4e-50
 Identities = 137/391 (35%), Positives = 210/391 (53%), Gaps = 22/391 (5%)
 Frame = -1

Query: 1363 CKSGDVSCVPESSYVPETEVENGTMMCSTMDSSGCVDGG--------IEEAPTSTDCAPK 1208
            C S  VSCVPESS+VPET++ NG        S G V GG        +EEA  S +    
Sbjct: 866  CVSIGVSCVPESSFVPETDINNGIEF-----SFGRVSGGQVGQASEILEEASVSNEFRQH 920

Query: 1207 TIPVEFSSLDYSC----EEDKVPVMAVRDLGVDTAPVHGEEIGESHIEPTEALPREYQMM 1040
               +     D       ++  +P      + V +     EE+ +S IE  E++ RE+Q+M
Sbjct: 921  VFTIGVDKFDEFMPKLHKDSDMPEGTCEFIAVSSH----EEVEDSQIELIESITREHQLM 976

Query: 1039 DECSRIDFCKKAEXXXXXXXXXXXXPVASIDLVQETWSRLRNCDSELRQYVSTEEKDILE 860
            DECS IDF +K +                ID V+E+W +LR+   +L  +V+ E K   E
Sbjct: 977  DECSCIDFSRKVKPHEICRSSM------EIDAVRESWRKLRDRRGDLGHFVAAEHK-CSE 1029

Query: 859  ALGVSYGMTNLISEADLLLADCQLLTCDYLKPSLVSTEKSHSFSWHDDQLQMASTIAQHG 680
             + ++  M+NLISEA++L   CQ L  D L   ++ +E+S +FSW ++QLQM S I +HG
Sbjct: 1030 IIEIACEMSNLISEAEVLHLKCQSL--DSLGLPMIYSEESDAFSWSNEQLQMTSAILEHG 1087

Query: 679  FCLYAKRSVAAGSIARMDLAWEM------LAASTNAISLGKLINQNNR----TVKSFGKK 530
            FC +AK   AAG    MD+ ++       +  + + I +G ++ QN +      +  G  
Sbjct: 1088 FCFHAKVIAAAG----MDMGFDSRVDSGEMPCTNSKIKVGGVLGQNVKGKQIDTRVGGVV 1143

Query: 529  MLQSGVSSKSMLESPVCSTVQSIVPLRSQLSLKGYVFHEYLSSLAQISRSETCRLSEAVN 350
                  +  +  +  +   ++S+VP R+ +++KG  F EY SSL  +SR+E+CRLSE VN
Sbjct: 1144 SWPENATLPNSEKPQLVDIIRSMVPSRAYMTIKGNAFCEYRSSLGHMSRAESCRLSEGVN 1203

Query: 349  KSNQRRKRVARNYLGNGALALSAEDISLLDE 257
            K+ +RR R ARNYL  G+L LS+E++SLL +
Sbjct: 1204 KTKKRRGRAARNYLSTGSLMLSSEEVSLLGQ 1234


>ref|XP_003589591.1| Replication factor C large subunit [Medicago truncatula]
            gi|355478639|gb|AES59842.1| Replication factor C large
            subunit [Medicago truncatula]
          Length = 1178

 Score =  176 bits (447), Expect = 1e-41
 Identities = 135/388 (34%), Positives = 203/388 (52%), Gaps = 15/388 (3%)
 Frame = -1

Query: 1360 KSGDVSCVPESSYVPETEVENGTMMCSTMDSSGCVDGGIEEAPTSTDCAPKTIPVEFSSL 1181
            KS D+S  PES +V ET ++N T   ST+ SSG    G    P     + +  P  FS  
Sbjct: 799  KSLDMSWFPESRFVSETAIQNRTETLSTVVSSG----GHLSCPVDVSLSNELRPFSFSVC 854

Query: 1180 DYSCEEDKVPVMAVRDLGVDTAPVHGEEIGESHIEPTEALPREYQMMDECSRIDFCKKAE 1001
                +  + P + V      ++P     I     + +  +   Y  MDECS  DF  +++
Sbjct: 855  QRLAKVPQGPDLLVTTEIPKSSP---RAIAPDFCDDSMEIATVYNPMDECSHSDFKLESK 911

Query: 1000 XXXXXXXXXXXXPVASIDLVQETWSRLRNCDSELRQYVSTEEKDILEALGVSYGMTNLIS 821
                            ID VQ  W +LR   ++L+Q+  +E+   +E + ++ G++NLIS
Sbjct: 912  FVDSSPSM-------EIDTVQNVWRKLR---TDLKQHAKSEQIGAIEVVKLASGLSNLIS 961

Query: 820  EADLLLADCQLLTCDYLKPSLVSTEKSHSFSWHDDQLQMASTIAQHGFCLYAKRSVAAGS 641
            EADLL  + Q   C  ++P   S     +FSW+D+Q+ M ST+A HGFC YAK    AG 
Sbjct: 962  EADLLFRNHQQKQCGIMEPP-TSLSDEDTFSWYDEQMMM-STVAAHGFCFYAKHIAEAGP 1019

Query: 640  IA----RMDLAWEMLAASTNAISLGKLINQNN-RTVKSFGKKMLQ--SGVSSKSM----L 494
                  R+D+  EMLA++ N ++LGKL  Q++ +T  S+ K++L+     + KS+     
Sbjct: 1020 KLGFEDRVDITSEMLASTANIMALGKLSRQDHTKTTSSYTKELLEVNDQRNDKSLRCNES 1079

Query: 493  ESPVCSTVQSIVPLRSQ-LSLKGYVFHEYLSSLAQISRSETCRLSEAVNKSNQRRKRVAR 317
             + + + ++SIVP RS   +++G  F E LSSL QIS SE  R+S+ V K  + R R A 
Sbjct: 1080 RTSLFNVIRSIVPARSSTTAIQGIAFSELLSSLRQISISEDFRISQGVKKMRKGR-RNAE 1138

Query: 316  NYLGNGALALSAEDISLL---DEYQKQS 242
            +YL  G + LS EDISLL   D Y+K S
Sbjct: 1139 HYLSRGKMVLSPEDISLLCEGDLYRKIS 1166


>ref|XP_004172956.1| PREDICTED: uncharacterized LOC101216488, partial [Cucumis sativus]
          Length = 571

 Score =  172 bits (436), Expect = 2e-40
 Identities = 141/384 (36%), Positives = 198/384 (51%), Gaps = 17/384 (4%)
 Frame = -1

Query: 1357 SGDVSCVPESSYVPETEVENGTMMCSTMDSSGCVDGGIEEAPTSTDCAPKTIPVE---FS 1187
            S   S VPES +VPETE+ +  +    M S G  D G     +  +     + VE   FS
Sbjct: 203  SAATSYVPESIFVPETEIHDMELF-PKMVSHG--DAGASPEISMDELFDNVLAVEANGFS 259

Query: 1186 SLDYSCEEDKVPVMAVRDLGVDTAPVHG----EEIGESHIEPTEALPREYQMMDECSRID 1019
            S  ++ +E         D+  D+  V      E  G S     E   R Y +MDECSRID
Sbjct: 260  SPSHTVQE-------TTDVLEDSCNVFNLSCPEGKGFSCNGHMENNVRGYPVMDECSRID 312

Query: 1018 FCKKAEXXXXXXXXXXXXPVASIDLVQETWSRLRNCDSELR-QYVSTEEKDILEALGVSY 842
            F K                  S D VQE W +LR    +L   +V+ E+K+ ++ + + +
Sbjct: 313  FNKSK-------FVEKPELEVSGDSVQELWKQLRFGRLDLLGDHVTPEKKETIQIIDLVH 365

Query: 841  GMTNLISEADLLLADCQLLTCDYLKPSLVSTEKSHSFSWHDDQLQMASTIAQHGFCLYAK 662
             M++LIS++DLL + CQ    D L+      E+S SFSW  +QLQMASTIAQHGF L A 
Sbjct: 366  RMSHLISDSDLL-SSCQ--PQDILETPTFEFEESDSFSWGGEQLQMASTIAQHGFSLIAN 422

Query: 661  RSVAAGSI----ARMDLAWEMLAASTNAISLGKLINQNNRTVKSFGKKMLQSGVSSKSML 494
                 GS     + +D+  EMLA++TN  +LGKL+  ++ T      K+L+  +     +
Sbjct: 423  DIATTGSHVGCDSSVDIVSEMLASTTNTAALGKLLRHSSTT------KILKPSLPGYCHM 476

Query: 493  -----ESPVCSTVQSIVPLRSQLSLKGYVFHEYLSSLAQISRSETCRLSEAVNKSNQRRK 329
                 +S +   +Q + P R  LSLKG  F EYLSSL  ISRSET R+S   +K+ +RR 
Sbjct: 477  LDRDMKSHLFDVIQKVAPNRLYLSLKGVQFFEYLSSLRCISRSETLRISRGPDKTKRRRG 536

Query: 328  RVARNYLGNGALALSAEDISLLDE 257
            RVAR+YL  G+   S EDI+LL +
Sbjct: 537  RVARHYLSTGSHLFSPEDITLLGQ 560


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