BLASTX nr result

ID: Atractylodes22_contig00019180 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00019180
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527480.1| conserved hypothetical protein [Ricinus comm...    82   7e-14
ref|XP_004140235.1| PREDICTED: F-box protein CPR30-like [Cucumis...    78   1e-12
ref|XP_003598336.1| F-box/kelch-repeat protein [Medicago truncat...    65   7e-09
ref|XP_002315233.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_002324387.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07

>ref|XP_002527480.1| conserved hypothetical protein [Ricinus communis]
           gi|223533120|gb|EEF34878.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 379

 Score = 81.6 bits (200), Expect = 7e-14
 Identities = 53/174 (30%), Positives = 90/174 (51%), Gaps = 4/174 (2%)
 Frame = -2

Query: 534 VSKAWKALIDSPEFIAA---YSVCHTHPHHLLIRYEHTVEIDERYVC-FVDDDTFPQQRS 367
           + K W +LI +  FI+    Y++   + ++L++R+       ER+   F DDD F + + 
Sbjct: 28  ICKTWYSLISNHNFISTHSRYTIDSNNNNYLILRHYSRSNKKERFALHFDDDDMFSEYQE 87

Query: 366 APALPLSIQLLSDGSRIVGSSDGLLCLYGDYLHPVNHLRKEMAVLWNPSIRKSVAIDVPN 187
              L   ++   D   IVGS +G++CL  ++ H +  +     VLWNPSI  SV + +  
Sbjct: 88  ---LDFPLESSWDYFEIVGSCNGIICLTDNHSHILKRI-----VLWNPSIGLSVTLPLQR 139

Query: 186 VEYGSYKTVLGFGVCPVTSDPKIVKITKKSCGTETYNSIPWKVEVYTLSSREWR 25
           + Y     VLGFG    T+D K+++I   S   ++   +P +VE++ LS   WR
Sbjct: 140 ISYKVSNVVLGFGFDSRTNDYKVIRIVYYSTNDDSL-MVPPEVEIFELSRGTWR 192


>ref|XP_004140235.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
           gi|449511918|ref|XP_004164088.1| PREDICTED: F-box
           protein CPR30-like [Cucumis sativus]
          Length = 391

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 62/190 (32%), Positives = 91/190 (47%), Gaps = 13/190 (6%)
 Frame = -2

Query: 534 VSKAWKALIDSPEFIAAYSVCHTHPHH------LLIR--YEHTVEIDERYVCFVDDDTFP 379
           VSK W++LI  P F+ ++       HH      LL+R  Y    +  ERY    D DT  
Sbjct: 28  VSKPWRSLITDPAFLLSHLNQSNTNHHRNRNRLLLLRRCYSTATKKAERYSLHFDSDTLG 87

Query: 378 QQRSAPALPLSIQLLSDGSRIVGSSDGLLCLYGDYLHPVNHLRKEMAVLWNPSIRKSVAI 199
             +    L L     +   ++VGSS+GLLCL G  +             WNPSI++ +A+
Sbjct: 88  IYKE---LKLPHVNWNQSFKLVGSSNGLLCLLGQNI-----------FFWNPSIQRFLAL 133

Query: 198 DVPN---VEYGS-YKTVLGFGVCPVTSDPKIVKITKKSCGTETYN-SIPWKVEVYTLSSR 34
             P+     YGS YK  LGFG     +D K+V++     G   Y+  +P +VE+Y LS+ 
Sbjct: 134 PWPSDIFTVYGSPYKYALGFGFDSRANDFKLVRLVYIEGGPPVYDYELPPRVELYQLSTG 193

Query: 33  EWRTPSCNLP 4
            WR  + + P
Sbjct: 194 SWRQITDSAP 203


>ref|XP_003598336.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355487384|gb|AES68587.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 255

 Score = 65.1 bits (157), Expect = 7e-09
 Identities = 52/176 (29%), Positives = 76/176 (43%), Gaps = 1/176 (0%)
 Frame = -2

Query: 528 KAWKALIDSPEFIAAYSVCHTHPHHLLIRYEHTVEIDERYVCFVDDDTFPQQRSAPALPL 349
           K +  LI   +F   +    T+ HHL++  +     DE +V            +  A  L
Sbjct: 22  KFFNTLISDSKFTKKHLHMSTYRHHLILSSK-----DESHVMSYPLHCIFNSVTINANKL 76

Query: 348 SIQLLSDGSRIVGSSDGLLCLYGDYLHPVNHLRKEMAVLWNPSIRKSVAID-VPNVEYGS 172
                     +VGS DG+LCL   Y HPV        +LWNPSIRK   +  + N   G 
Sbjct: 77  HFPFNKHYFSVVGSCDGILCLVS-YRHPV--------ILWNPSIRKFAKLPYLENPIKGG 127

Query: 171 YKTVLGFGVCPVTSDPKIVKITKKSCGTETYNSIPWKVEVYTLSSREWRTPSCNLP 4
             T  GFG  P+T + K+V +     G     +   K++V+TL +  WRT   + P
Sbjct: 128 CYTTYGFGYVPLTGNYKVVTVFNHVSGNGPNKA---KLKVHTLGTNNWRTIEGDFP 180


>ref|XP_002315233.1| predicted protein [Populus trichocarpa] gi|222864273|gb|EEF01404.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 50/171 (29%), Positives = 84/171 (49%)
 Frame = -2

Query: 537 SVSKAWKALIDSPEFIAAYSVCHTHPHHLLIRYEHTVEIDERYVCFVDDDTFPQQRSAPA 358
           SVSK W +LI S EFI+ + +    P  LL+ + H    ++ Y   +D+++     S   
Sbjct: 29  SVSKYWNSLITSAEFISIH-LAQAKP--LLLFHHH----NQSYSLRLDNESL-DMWSNSE 80

Query: 357 LPLSIQLLSDGSRIVGSSDGLLCLYGDYLHPVNHLRKEMAVLWNPSIRKSVAIDVPNVEY 178
             L  +   D  +I+GS +G++CL      P +H      +LWNPSI KS+ + +P +  
Sbjct: 81  FELPSKREDDDFQIIGSCNGVICLLNS---PQDH--GHSIILWNPSIGKSLNLVLPRLS- 134

Query: 177 GSYKTVLGFGVCPVTSDPKIVKITKKSCGTETYNSIPWKVEVYTLSSREWR 25
             +  + GFG    ++D K V++      T  Y   P   +VY++  R W+
Sbjct: 135 DPFHGIFGFGFNRQSNDYKFVRV-----ATPHY---PVGCQVYSVKERSWK 177


>ref|XP_002324387.1| predicted protein [Populus trichocarpa] gi|222865821|gb|EEF02952.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 53/173 (30%), Positives = 76/173 (43%), Gaps = 3/173 (1%)
 Frame = -2

Query: 534 VSKAWKALIDSPEFIAAYSVCHTHPHHLLIRYEHTVEIDERY---VCFVDDDTFPQQRSA 364
           V K W ALI S +FI  +  C   P H ++         E Y   V   D  + P+ R+ 
Sbjct: 30  VCKRWLALITSSDFILTH--CKHRPKHSIMLTN--TWFGENYGISVLEADAKSKPEHRNL 85

Query: 363 PALPLSIQLLSDGSRIVGSSDGLLCLYGDYLHPVNHLRKEMAVLWNPSIRKSVAIDVPNV 184
           P+  ++  +   G   +GSS+GLLC+Y    H V++       LWN + RK   +  P  
Sbjct: 86  PSSLMNNVVKCRG---IGSSNGLLCVYVKNTHNVDYF------LWNLATRKHRLLLFPPT 136

Query: 183 EYGSYKTVLGFGVCPVTSDPKIVKITKKSCGTETYNSIPWKVEVYTLSSREWR 25
                    GFG  P TSD K++ I   S        +  K  VYTLS+  W+
Sbjct: 137 LGHYTPRTFGFGFVPETSDYKLLIIDDASFD----GHLNLKALVYTLSTDSWK 185


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