BLASTX nr result

ID: Atractylodes22_contig00019152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00019152
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002889313.1| hypothetical protein ARALYDRAFT_477251 [Arab...   153   8e-39
ref|XP_002517654.1| Pre-mRNA-processing-splicing factor, putativ...   153   8e-39
ref|XP_003632761.1| PREDICTED: pre-mRNA-processing-splicing fact...   153   8e-39
ref|NP_178124.2| Pre-mRNA-processing-splicing factor [Arabidopsi...   153   8e-39
ref|XP_002327417.1| predicted protein [Populus trichocarpa] gi|2...   153   8e-39

>ref|XP_002889313.1| hypothetical protein ARALYDRAFT_477251 [Arabidopsis lyrata subsp.
            lyrata] gi|297335154|gb|EFH65572.1| hypothetical protein
            ARALYDRAFT_477251 [Arabidopsis lyrata subsp. lyrata]
          Length = 2381

 Score =  153 bits (387), Expect(2) = 8e-39
 Identities = 74/76 (97%), Positives = 74/76 (97%)
 Frame = -1

Query: 268  GNWFLGSKPLLAQAMNKIMKSNPALYVLRERIRKGLQLYSLEPTEPYLSSQNYGEIFSNQ 89
            GNWF GSKPLLAQAMNKIMKSNPALYVLRERIRKGLQLYS EPTEPYLSSQNYGEIFSNQ
Sbjct: 1762 GNWFPGSKPLLAQAMNKIMKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEIFSNQ 1821

Query: 88   IIWFVDDTNVYRVTIH 41
            IIWFVDDTNVYRVTIH
Sbjct: 1822 IIWFVDDTNVYRVTIH 1837



 Score = 32.0 bits (71), Expect(2) = 8e-39
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -3

Query: 41   HKTFEGNLTTKPI 3
            HKTFEGNLTTKPI
Sbjct: 1837 HKTFEGNLTTKPI 1849


>ref|XP_002517654.1| Pre-mRNA-processing-splicing factor, putative [Ricinus communis]
            gi|223543286|gb|EEF44818.1| Pre-mRNA-processing-splicing
            factor, putative [Ricinus communis]
          Length = 2376

 Score =  153 bits (387), Expect(2) = 8e-39
 Identities = 74/76 (97%), Positives = 74/76 (97%)
 Frame = -1

Query: 268  GNWFLGSKPLLAQAMNKIMKSNPALYVLRERIRKGLQLYSLEPTEPYLSSQNYGEIFSNQ 89
            GNWF GSKPLLAQAMNKIMKSNPALYVLRERIRKGLQLYS EPTEPYLSSQNYGEIFSNQ
Sbjct: 1757 GNWFPGSKPLLAQAMNKIMKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEIFSNQ 1816

Query: 88   IIWFVDDTNVYRVTIH 41
            IIWFVDDTNVYRVTIH
Sbjct: 1817 IIWFVDDTNVYRVTIH 1832



 Score = 32.0 bits (71), Expect(2) = 8e-39
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -3

Query: 41   HKTFEGNLTTKPI 3
            HKTFEGNLTTKPI
Sbjct: 1832 HKTFEGNLTTKPI 1844


>ref|XP_003632761.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like isoform 1
            [Vitis vinifera]
          Length = 2367

 Score =  153 bits (387), Expect(2) = 8e-39
 Identities = 74/76 (97%), Positives = 74/76 (97%)
 Frame = -1

Query: 268  GNWFLGSKPLLAQAMNKIMKSNPALYVLRERIRKGLQLYSLEPTEPYLSSQNYGEIFSNQ 89
            GNWF GSKPLLAQAMNKIMKSNPALYVLRERIRKGLQLYS EPTEPYLSSQNYGEIFSNQ
Sbjct: 1748 GNWFPGSKPLLAQAMNKIMKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEIFSNQ 1807

Query: 88   IIWFVDDTNVYRVTIH 41
            IIWFVDDTNVYRVTIH
Sbjct: 1808 IIWFVDDTNVYRVTIH 1823



 Score = 32.0 bits (71), Expect(2) = 8e-39
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -3

Query: 41   HKTFEGNLTTKPI 3
            HKTFEGNLTTKPI
Sbjct: 1823 HKTFEGNLTTKPI 1835


>ref|NP_178124.2| Pre-mRNA-processing-splicing factor [Arabidopsis thaliana]
            gi|5902365|gb|AAD55467.1|AC009322_7 Putative splicing
            factor Prp8 [Arabidopsis thaliana]
            gi|332198232|gb|AEE36353.1| Pre-mRNA-processing-splicing
            factor [Arabidopsis thaliana]
          Length = 2359

 Score =  153 bits (387), Expect(2) = 8e-39
 Identities = 74/76 (97%), Positives = 74/76 (97%)
 Frame = -1

Query: 268  GNWFLGSKPLLAQAMNKIMKSNPALYVLRERIRKGLQLYSLEPTEPYLSSQNYGEIFSNQ 89
            GNWF GSKPLLAQAMNKIMKSNPALYVLRERIRKGLQLYS EPTEPYLSSQNYGEIFSNQ
Sbjct: 1740 GNWFPGSKPLLAQAMNKIMKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEIFSNQ 1799

Query: 88   IIWFVDDTNVYRVTIH 41
            IIWFVDDTNVYRVTIH
Sbjct: 1800 IIWFVDDTNVYRVTIH 1815



 Score = 32.0 bits (71), Expect(2) = 8e-39
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -3

Query: 41   HKTFEGNLTTKPI 3
            HKTFEGNLTTKPI
Sbjct: 1815 HKTFEGNLTTKPI 1827


>ref|XP_002327417.1| predicted protein [Populus trichocarpa] gi|222835971|gb|EEE74392.1|
            predicted protein [Populus trichocarpa]
          Length = 2357

 Score =  153 bits (387), Expect(2) = 8e-39
 Identities = 74/76 (97%), Positives = 74/76 (97%)
 Frame = -1

Query: 268  GNWFLGSKPLLAQAMNKIMKSNPALYVLRERIRKGLQLYSLEPTEPYLSSQNYGEIFSNQ 89
            GNWF GSKPLLAQAMNKIMKSNPALYVLRERIRKGLQLYS EPTEPYLSSQNYGEIFSNQ
Sbjct: 1738 GNWFPGSKPLLAQAMNKIMKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEIFSNQ 1797

Query: 88   IIWFVDDTNVYRVTIH 41
            IIWFVDDTNVYRVTIH
Sbjct: 1798 IIWFVDDTNVYRVTIH 1813



 Score = 32.0 bits (71), Expect(2) = 8e-39
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -3

Query: 41   HKTFEGNLTTKPI 3
            HKTFEGNLTTKPI
Sbjct: 1813 HKTFEGNLTTKPI 1825


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