BLASTX nr result

ID: Atractylodes22_contig00019119 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00019119
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arab...    82   5e-14
ref|XP_003593883.1| F-box protein SKIP19 [Medicago truncatula] g...    81   8e-14
ref|XP_003593882.1| F-box protein SKIP19 [Medicago truncatula] g...    76   3e-12
ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinif...    73   2e-11
ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycin...    72   5e-11

>ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arabidopsis lyrata subsp.
           lyrata] gi|297320680|gb|EFH51102.1| hypothetical protein
           ARALYDRAFT_911810 [Arabidopsis lyrata subsp. lyrata]
          Length = 610

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 47/108 (43%), Positives = 62/108 (57%)
 Frame = +2

Query: 2   SKEAIETTARYCPMLKTLKVNHEACRFGYDRNTDEESIMMQNEMSIAIGXXXXXXXXXXX 181
           S E+++   + CP LKTLK+N E       +  D+E     NE ++AI            
Sbjct: 482 SGESLKVVGQSCPNLKTLKLNSEPD----PKFNDDE---FNNEEALAIAESMPELRHLQL 534

Query: 182 VGEIMSNIGLQAILDGCRHLKSLDLSKCLYIDLKGDLGKRCSEQIKCL 325
            G I++N+GL AILDGC HL+ LDL KC  +DL GDL KRC E+IK L
Sbjct: 535 FGNILTNVGLNAILDGCPHLEHLDLRKCSNVDLTGDLEKRCVERIKDL 582



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 40/108 (37%), Positives = 53/108 (49%)
 Frame = +2

Query: 2   SKEAIETTARYCPMLKTLKVNHEACRFGYDRNTDEESIMMQNEMSIAIGXXXXXXXXXXX 181
           S E +    + CP L TLK+N         R   E  I M++  +IAI            
Sbjct: 152 SGECLSVVGQSCPHLTTLKLNR--------RPRVEFVINMRDHNAIAIAESMPELRHLQL 203

Query: 182 VGEIMSNIGLQAILDGCRHLKSLDLSKCLYIDLKGDLGKRCSEQIKCL 325
           +G  ++N GL AILD C HL  LDL +C  I+L  D  K+C E+IK L
Sbjct: 204 LGNALTNTGLNAILDSCTHLDHLDLRQCYNINLVEDFMKQCVERIKYL 251


>ref|XP_003593883.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355482931|gb|AES64134.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 325

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 42/106 (39%), Positives = 57/106 (53%)
 Frame = +2

Query: 2   SKEAIETTARYCPMLKTLKVNHEACRFGYDRNTDEESIMMQNEMSIAIGXXXXXXXXXXX 181
           S    E   R CP LKTLK N +  R  + +  D++     +  + AI            
Sbjct: 158 SDRLFEPIGRRCPRLKTLKFNSQGYRHPHIQYDDDDEDAYDDNEAFAIAKYMPGLRHLQL 217

Query: 182 VGEIMSNIGLQAILDGCRHLKSLDLSKCLYIDLKGDLGKRCSEQIK 319
           +G  M+N GL A+LDGC HL+SLD+ +C  ++L G LGKRC EQIK
Sbjct: 218 IGNEMTNDGLVALLDGCPHLESLDIRRCFNVNLVGTLGKRCKEQIK 263


>ref|XP_003593882.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355482930|gb|AES64133.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 332

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 45/108 (41%), Positives = 55/108 (50%)
 Frame = +2

Query: 2   SKEAIETTARYCPMLKTLKVNHEACRFGYDRNTDEESIMMQNEMSIAIGXXXXXXXXXXX 181
           S + +E   R CP LKT K N E  R       DE         + +I            
Sbjct: 160 SNDPLEAIGRCCPQLKTFKFNIEGFRRPRMEFDDE---------AFSIAKTMPGLRHLML 210

Query: 182 VGEIMSNIGLQAILDGCRHLKSLDLSKCLYIDLKGDLGKRCSEQIKCL 325
           VG  MS  GL+AILDGC HL+SLD+ +C  + L+G LGKRC EQIK L
Sbjct: 211 VGNKMSKDGLRAILDGCPHLESLDIRQCFNLSLRGSLGKRCREQIKYL 258


>ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinifera]
           gi|147853333|emb|CAN82327.1| hypothetical protein
           VITISV_041807 [Vitis vinifera]
           gi|297740788|emb|CBI30970.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 43/108 (39%), Positives = 60/108 (55%)
 Frame = +2

Query: 2   SKEAIETTARYCPMLKTLKVNHEACRFGYDRNTDEESIMMQNEMSIAIGXXXXXXXXXXX 181
           SKE +E   + CP LK+ ++N +  R  +    DEE++        AI            
Sbjct: 155 SKEVLEAIGQCCPRLKSFRLNCQGFRHPHIE-CDEEAL--------AIAQNMPGLKSLQL 205

Query: 182 VGEIMSNIGLQAILDGCRHLKSLDLSKCLYIDLKGDLGKRCSEQIKCL 325
            G  ++N GL AILDGC HL+SLDL +C  ++L G+L KRC+EQIK L
Sbjct: 206 FGNKLTNNGLLAILDGCCHLESLDLRQCFNVNLGGNLAKRCAEQIKIL 253


>ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 318

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 44/106 (41%), Positives = 58/106 (54%)
 Frame = +2

Query: 2   SKEAIETTARYCPMLKTLKVNHEACRFGYDRNTDEESIMMQNEMSIAIGXXXXXXXXXXX 181
           +++ +E   R C  LKTLK N +    GY R   E      +E + AI            
Sbjct: 156 TRDPLEAVGRCCRHLKTLKFNMK----GYRRPHIE-----CDEEAFAIAETMPTLHHLQL 206

Query: 182 VGEIMSNIGLQAILDGCRHLKSLDLSKCLYIDLKGDLGKRCSEQIK 319
            G  ++N GL AILDGC HL+SLDL +C  ++L G LGKRC+EQIK
Sbjct: 207 FGNKLTNEGLLAILDGCPHLESLDLRQCFNVNLAGSLGKRCAEQIK 252


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