BLASTX nr result

ID: Atractylodes22_contig00019102 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00019102
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32365.3| unnamed protein product [Vitis vinifera]              185   3e-45
ref|XP_002277211.1| PREDICTED: small nuclear ribonucleoprotein S...   185   3e-45
ref|XP_002275736.1| PREDICTED: small nuclear ribonucleoprotein S...   184   8e-45
ref|XP_002520764.1| small nuclear ribonucleoprotein sm d1, putat...   184   8e-45
emb|CBI39815.3| unnamed protein product [Vitis vinifera]              182   2e-44

>emb|CBI32365.3| unnamed protein product [Vitis vinifera]
          Length = 144

 Score =  185 bits (470), Expect = 3e-45
 Identities = 92/92 (100%), Positives = 92/92 (100%)
 Frame = -3

Query: 489 LMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIR 310
           LMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIR
Sbjct: 37  LMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIR 96

Query: 309 YYILPDSLNLETLLVEETPRVKPKKPTAGRPM 214
           YYILPDSLNLETLLVEETPRVKPKKPTAGRPM
Sbjct: 97  YYILPDSLNLETLLVEETPRVKPKKPTAGRPM 128


>ref|XP_002277211.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like isoform 1
           [Vitis vinifera] gi|225436988|ref|XP_002277231.1|
           PREDICTED: small nuclear ribonucleoprotein Sm D1-like
           isoform 2 [Vitis vinifera]
          Length = 114

 Score =  185 bits (470), Expect = 3e-45
 Identities = 92/92 (100%), Positives = 92/92 (100%)
 Frame = -3

Query: 489 LMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIR 310
           LMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIR
Sbjct: 7   LMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIR 66

Query: 309 YYILPDSLNLETLLVEETPRVKPKKPTAGRPM 214
           YYILPDSLNLETLLVEETPRVKPKKPTAGRPM
Sbjct: 67  YYILPDSLNLETLLVEETPRVKPKKPTAGRPM 98


>ref|XP_002275736.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Vitis
           vinifera]
          Length = 114

 Score =  184 bits (466), Expect = 8e-45
 Identities = 90/92 (97%), Positives = 92/92 (100%)
 Frame = -3

Query: 489 LMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIR 310
           LMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVT+DHLSVRGNNIR
Sbjct: 7   LMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTMDHLSVRGNNIR 66

Query: 309 YYILPDSLNLETLLVEETPRVKPKKPTAGRPM 214
           YYILPDS+NLETLLVEETPRVKPKKPTAGRPM
Sbjct: 67  YYILPDSINLETLLVEETPRVKPKKPTAGRPM 98


>ref|XP_002520764.1| small nuclear ribonucleoprotein sm d1, putative [Ricinus communis]
           gi|223540149|gb|EEF41726.1| small nuclear
           ribonucleoprotein sm d1, putative [Ricinus communis]
          Length = 114

 Score =  184 bits (466), Expect = 8e-45
 Identities = 90/92 (97%), Positives = 92/92 (100%)
 Frame = -3

Query: 489 LMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIR 310
           LMKLNNETVSIELKNGT+VHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIR
Sbjct: 7   LMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIR 66

Query: 309 YYILPDSLNLETLLVEETPRVKPKKPTAGRPM 214
           YYILPDSLNLETLLVEETPRVKPKKPTAGRP+
Sbjct: 67  YYILPDSLNLETLLVEETPRVKPKKPTAGRPL 98


>emb|CBI39815.3| unnamed protein product [Vitis vinifera]
          Length = 107

 Score =  182 bits (462), Expect = 2e-44
 Identities = 89/91 (97%), Positives = 91/91 (100%)
 Frame = -3

Query: 486 MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRY 307
           MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVT+DHLSVRGNNIRY
Sbjct: 1   MKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTMDHLSVRGNNIRY 60

Query: 306 YILPDSLNLETLLVEETPRVKPKKPTAGRPM 214
           YILPDS+NLETLLVEETPRVKPKKPTAGRPM
Sbjct: 61  YILPDSINLETLLVEETPRVKPKKPTAGRPM 91


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